Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007542.1 Hibiscus syriacus cultivar Beakdansim tig00021128_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59783

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3568--3611
18
2.5
17
85
7
52
6
18
4
70
1.27
5957--5999
23
1.9
21
81
13
50
32
18
13
34
1.90
14212--14262
19
2.6
20
87
3
68
45
5
15
33
1.71
17435--17480
13
3.3
15
79
14
55
2
17
0
80
0.81
18820--18887
35
1.9
36
93
3
120
30
36
2
29
1.72
24504--24571
35
1.9
36
93
3
120
30
36
2
29
1.72
25719--25769
19
2.6
20
87
3
68
45
5
15
33
1.71
33032--33081
24
2.0
25
85
11
68
66
0
18
16
1.26
33303--33343
21
2.0
21
85
9
57
0
19
2
78
0.87
33730--33776
11
4.1
11
80
20
60
25
2
36
36
1.68
33730--33776
24
2.0
24
84
15
64
25
2
36
36
1.68
33730--33809
35
2.2
37
88
4
119
27
2
37
32
1.70
41247--41306
28
2.2
27
80
13
70
16
3
8
71
1.24
42210--42249
21
1.9
21
85
10
55
62
0
17
20
1.33
42272--42316
22
2.2
20
84
8
54
31
2
35
31
1.70
46065--46148
12
6.8
12
73
25
61
4
14
3
77
1.07
46116--46146
16
1.9
16
93
0
53
0
16
3
80
0.83
46383--46424
14
3.0
14
80
10
50
59
0
19
21
1.38
46442--46482
22
1.9
21
90
5
64
26
2
36
34
1.70
47770--47815
19
2.3
20
85
3
58
34
15
6
43
1.72
51089--51178
26
3.5
26
92
0
153
28
34
0
36
1.58
59119--59159
20
2.0
20
90
9
66
19
14
0
65
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59453--59487
18
2.0
18
88
5
54
77
5
8
8
1.13

Tables:   1

The End!