Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007546.1 Hibiscus syriacus cultivar Beakdansim tig00021148_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86152

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4683--4717
18
1.9
19
88
11
56
71
0
17
11
1.14
19378--19404
13
2.1
13
100
0
54
22
14
18
44
1.86
25776--25806
2
15.5
2
100
0
62
48
0
0
51
1.00
25818--25936
39
3.3
34
76
16
98
45
5
8
40
1.59
25927--26018
39
2.4
37
83
8
114
45
3
7
43
1.48
26012--26111
34
3.0
34
72
20
95
48
4
6
42
1.46
26089--26239
38
3.9
39
74
6
137
44
3
7
45
1.48
36063--36107
23
2.0
23
86
0
63
20
8
17
53
1.70
53718--53822
28
3.7
28
79
18
94
44
0
1
52
1.18
53807--53868
23
2.6
23
84
5
70
51
4
3
40
1.39
54159--54231
30
2.5
30
97
2
139
31
20
6
41
1.79
54159--54231
15
4.9
15
83
3
103
31
20
6
41
1.79
67691--67804
48
2.4
47
82
7
135
26
23
22
27
2.00
68460--68557
45
2.1
47
81
12
114
31
17
21
29
1.96
68590--68688
50
2.0
49
80
9
112
24
30
26
19
1.98
68936--68967
2
16.0
2
100
0
64
50
0
0
50
1.00
70834--70858
9
2.8
9
100
0
50
80
0
0
20
0.72
77752--77788
6
6.2
6
93
0
65
32
48
16
2
1.60
81821--82005
6
30.8
6
100
0
370
33
49
16
0
1.46
82003--82083
5
15.8
5
91
5
81
29
30
39
0
1.57
82014--82090
5
15.6
5
93
1
93
31
28
40
0
1.57
82002--82083
15
5.3
15
89
2
110
30
30
39
0
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85608--85702
31
3.1
30
69
14
79
44
2
2
51
1.25
86008--86121
60
1.9
60
83
0
147
46
4
3
45
1.40

Tables:   1

The End!