Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007551.1 Hibiscus syriacus cultivar Beakdansim tig00021168_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68894

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2529
7
376.1
7
89
9
3954
42
43
0
14
1.46
2536--2826
7
45.1
7
91
8
407
15
54
30
0
1.41
2533--2826
13
22.8
13
90
8
398
15
54
30
0
1.42
2825--2900
7
11.4
7
80
10
70
23
57
18
0
1.40
2825--2900
13
5.8
13
83
9
66
23
57
18
0
1.40
4944--5067
7
17.7
7
90
0
140
37
48
4
8
1.56
7130--7268
21
6.6
21
91
0
170
37
48
5
8
1.56
7130--7267
7
19.7
7
88
0
150
37
48
5
8
1.56
9340--9491
7
21.7
7
88
0
169
38
47
4
9
1.56
11563--11693
7
18.7
7
89
3
129
36
47
6
9
1.62
13768--13906
7
19.7
7
86
4
145
37
47
5
10
1.59
15977--16051
7
10.7
7
91
0
123
42
44
1
12
1.50
18142--18259
7
16.7
7
83
5
103
39
50
2
7
1.45
18155--18260
7
15.0
7
87
2
122
39
51
2
5
1.40
20336--20453
7
16.7
7
83
5
103
39
50
2
7
1.45
20349--20454
7
15.0
7
87
2
122
39
51
2
5
1.40
22531--22648
7
16.7
7
83
5
103
39
50
2
7
1.45
22544--22649
7
15.0
7
87
2
122
39
51
2
5
1.40
24725--24890
7
23.7
7
89
0
242
42
42
0
14
1.50
24738--24918
28
6.5
28
86
2
148
39
44
3
12
1.59
24858--24937
7
11.4
7
87
0
70
33
50
10
6
1.61
24725--24937
14
15.2
14
85
3
124
38
43
4
13
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27007--27171
7
23.7
7
88
3
226
41
43
0
14
1.50
27139--27209
7
10.4
7
86
6
74
35
53
8
2
1.46
27140--27204
33
2.0
33
81
0
76
33
55
7
3
1.44
29280--29494
7
30.7
7
89
0
196
37
44
4
13
1.64
31557--31756
7
28.7
7
88
3
242
40
44
2
12
1.56
33982--34021
21
1.9
21
85
10
55
35
10
2
52
1.48
35684--35719
11
3.4
11
96
3
65
8
25
8
58
1.55
35684--35727
21
2.1
21
83
8
54
11
20
11
56
1.64
35932--35980
19
2.7
17
84
9
53
26
20
28
24
1.99
35949--36056
45
2.4
45
85
4
146
30
17
21
30
1.96
36001--36141
64
2.2
64
82
8
171
25
17
23
34
1.96
37080--37266
47
4.0
47
95
1
331
34
9
24
31
1.88
47031--47079
21
2.6
17
75
22
53
42
18
18
20
1.89
48800--48838
12
3.2
12
81
0
51
2
61
0
35
1.10
48801--48835
18
1.9
18
88
0
52
2
62
0
34
1.10
53085--53160
40
1.9
40
91
0
125
19
9
19
51
1.73
63868--63903
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!