Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007555.1 Hibiscus syriacus cultivar Beakdansim tig00021219_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41689

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2177--2263
25
3.5
25
74
13
90
44
3
0
51
1.18
2205--2247
19
2.3
19
79
0
50
48
2
0
48
1.14
3376--3419
21
2.0
23
86
8
65
47
4
0
47
1.22
3542--3609
22
3.3
21
75
17
63
50
1
0
48
1.10
23141--23169
2
14.5
2
100
0
58
51
0
0
48
1.00
27199--27433
32
7.3
32
85
2
303
34
18
17
29
1.94
27199--27436
64
3.7
64
85
2
334
34
18
16
29
1.94
27199--27435
96
2.5
96
85
0
339
35
18
16
29
1.94
35287--35325
16
2.4
16
91
0
60
48
2
7
41
1.45
38292--38340
17
2.6
19
75
18
57
42
2
0
55
1.11
38298--38359
26
2.4
25
79
10
72
43
1
0
54
1.09
40651--40675
13
1.9
13
100
0
50
52
0
0
48
1.00
41201--41230
15
1.9
16
93
6
53
30
10
13
46
1.75

Tables:   1

The End!