Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007557.1 Hibiscus syriacus cultivar Beakdansim tig00021264_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96959

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7833--7858
13
2.0
13
100
0
52
61
7
0
30
1.24
10247--10281
18
1.9
18
88
0
52
42
0
2
54
1.15
10630--10683
22
2.5
21
82
11
65
25
0
3
70
1.04
16876--17163
144
2.0
144
88
1
425
34
10
24
31
1.89
21043--21077
18
1.9
18
88
0
52
42
0
2
54
1.15
40051--40106
21
2.7
21
100
0
112
26
19
21
32
1.97
40843--40879
19
2.0
19
89
5
58
51
2
21
24
1.61
40988--41035
18
2.7
18
96
0
87
14
25
35
25
1.94
44610--44636
13
2.1
13
100
0
54
33
22
0
44
1.53
49716--49743
2
14.0
2
100
0
56
50
0
0
50
1.00
53201--53264
23
2.8
23
82
0
92
32
26
25
15
1.95
53653--53682
2
15.0
2
100
0
60
50
0
0
50
1.00
53821--53869
25
1.9
26
95
4
91
46
10
0
42
1.37
57403--57584
63
2.9
63
84
0
229
46
7
30
15
1.73
66306--66463
29
5.4
29
88
3
203
32
1
15
50
1.52
66306--66462
57
2.7
57
89
2
215
31
1
15
50
1.52
88303--88339
4
9.0
4
88
5
56
70
2
0
27
1.01
88303--88339
17
2.2
16
90
4
56
70
2
0
27
1.01
88416--88644
34
6.6
35
78
10
238
40
10
5
43
1.62
88416--88644
104
2.2
105
86
7
324
40
10
5
43
1.62
88417--88644
69
3.3
69
80
10
250
40
10
5
42
1.62

Tables:   1

The End!