Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007564.1 Hibiscus syriacus cultivar Beakdansim tig00021500_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71931

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5205--5416
41
5.1
42
69
11
150
29
25
17
27
1.97
5238--5463
41
5.5
41
68
11
131
27
22
19
30
1.98
5167--5461
83
3.6
83
86
1
389
28
23
18
29
1.97
14992--15068
31
2.5
31
78
2
82
27
29
27
15
1.96
20711--20787
31
2.5
31
82
6
93
25
27
27
19
1.99
25771--25845
20
3.6
20
74
10
60
20
21
33
25
1.97
34780--34824
21
2.3
19
88
7
63
22
2
0
75
0.91
39287--39596
154
2.0
154
98
0
593
31
31
16
20
1.95
45197--45221
13
1.9
13
100
0
50
16
16
48
20
1.82
45199--45234
17
2.1
18
89
5
56
11
22
47
19
1.80
51749--51784
9
3.8
9
86
13
54
61
0
0
38
0.96
52317--52380
30
2.2
30
82
2
85
39
23
6
31
1.79
52403--52427
13
1.9
13
100
0
50
20
24
40
16
1.91
52408--52454
22
2.1
23
92
4
78
10
21
48
19
1.78
57345--57442
31
3.2
31
77
7
110
48
5
3
42
1.40
57408--57554
76
1.9
77
92
1
251
38
6
6
48
1.57
63146--63196
19
2.7
19
90
0
75
23
31
19
25
1.98
66574--66612
20
2.0
20
84
0
51
23
15
10
51
1.73
67350--67606
128
2.0
128
93
1
435
29
19
16
33
1.94

Tables:   1

The End!