Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007576.1 Hibiscus syriacus cultivar Beakdansim tig00021598_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38408

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
768--1093
59
5.6
59
87
2
453
33
15
20
30
1.93
10497--10545
3
16.3
3
83
8
64
40
0
0
59
0.98
10497--10545
16
2.9
17
82
14
57
40
0
0
59
0.98
15760--15791
15
2.1
15
94
0
55
25
18
9
46
1.79
23084--23145
1
62.0
1
77
0
61
88
0
11
0
0.51
23084--23145
10
6.2
10
85
14
92
88
0
11
0
0.51
23084--23139
18
3.2
18
90
7
89
89
0
10
0
0.49
23084--23146
28
2.2
28
91
5
101
87
0
12
0
0.55
23081--23146
17
3.8
17
84
13
82
86
0
13
0
0.57
23999--24475
187
2.6
185
91
6
766
28
16
21
33
1.95
23999--24475
92
5.1
94
93
4
783
28
16
21
33
1.95
24864--25061
95
2.1
95
99
0
387
37
14
15
31
1.88
25394--26160
113
6.7
114
87
5
949
39
14
18
27
1.89
25394--26160
230
3.3
229
85
5
962
39
14
18
27
1.89
25953--26179
124
1.8
124
88
0
348
43
14
17
25
1.86
25955--26244
124
2.4
122
80
4
278
43
15
18
22
1.87
26384--26432
3
16.0
3
83
12
64
36
0
0
63
0.95
35380--35851
59
8.0
59
93
0
730
33
15
20
31
1.93

Tables:   1

The End!