Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007577.1 Hibiscus syriacus cultivar Beakdansim tig00021607_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44480

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3408--3505
49
2.0
49
95
0
178
27
15
19
37
1.92
5592--5635
16
2.6
17
85
7
54
47
0
0
52
1.00
5713--5754
10
4.4
10
79
11
52
42
0
0
57
0.99
5686--5726
19
2.1
20
82
13
50
41
2
0
56
1.13
5715--5756
9
4.6
9
80
14
50
42
0
0
57
0.99
5997--6045
21
2.5
20
83
6
64
53
2
0
44
1.12
6529--6566
16
2.4
17
82
13
53
50
0
0
50
1.00
6636--6686
26
2.0
26
96
0
93
27
5
15
50
1.67
6721--6775
26
2.1
26
86
0
74
29
1
18
50
1.57
8908--8945
15
2.4
17
78
13
53
26
5
5
63
1.37
13242--13270
13
2.1
14
93
6
51
48
0
0
51
1.00
13252--13315
26
2.5
26
73
19
62
45
1
1
51
1.20
13295--13338
19
2.2
20
84
4
54
43
0
0
56
0.99
18157--18200
16
2.6
17
85
7
54
47
0
0
52
1.00
18251--18293
20
2.2
20
83
8
52
41
2
0
55
1.12
18567--18619
19
2.7
19
80
11
63
50
1
0
47
1.12
19204--19254
26
2.0
26
96
0
93
27
5
15
50
1.67
19289--19343
26
2.1
26
82
0
65
29
3
18
49
1.64
21468--21505
15
2.4
17
78
13
53
26
5
5
63
1.37
27005--27045
21
2.0
21
90
0
64
14
14
26
43
1.84
28032--28087
7
8.1
7
94
4
78
0
19
55
25
1.43
28083--44480
7
2380.3
7
96
2
25804
14
3
43
38
1.62

Tables:   1

The End!