Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007588.1 Hibiscus syriacus cultivar Beakdansim tig00021847_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47352

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2934--2997
26
2.3
27
81
13
67
53
3
3
40
1.33
5912--5952
20
2.0
20
86
9
57
36
0
0
63
0.95
6105--6169
27
2.4
28
77
12
71
50
1
3
44
1.26
9030--9070
20
2.0
20
86
9
57
36
0
0
63
0.95
12381--12429
18
2.7
19
81
12
50
44
2
4
48
1.33
12893--12920
2
14.0
2
100
0
56
50
0
0
50
1.00
16113--16138
2
13.0
2
100
0
52
50
0
0
50
1.00
27528--27585
5
12.2
5
76
10
59
1
15
56
25
1.49
27527--27585
9
6.3
9
77
14
57
1
16
55
25
1.50
39769--39809
18
2.2
19
83
12
50
39
2
2
56
1.26
45420--45488
31
2.3
29
82
9
77
52
1
2
43
1.25
45903--45930
2
14.0
2
100
0
56
50
0
0
50
1.00
45927--45966
18
2.2
18
86
8
55
42
2
2
52
1.28

Tables:   1

The End!