Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000759.1 Hibiscus syriacus cultivar Beakdansim tig00001467_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59840

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1481--1555
36
2.1
36
95
2
134
32
10
14
42
1.80
3813--3890
36
2.2
36
85
0
102
16
10
43
29
1.81
10404--10671
132
2.0
134
97
1
504
35
9
9
45
1.70
32476--32557
27
3.1
26
81
6
76
57
0
2
40
1.12
32494--32572
27
3.0
27
83
5
83
55
0
5
39
1.22
34575--34621
22
2.1
22
92
7
78
51
29
6
12
1.65
37323--37361
20
1.9
21
89
5
62
51
2
5
41
1.38
37871--37920
19
2.7
19
84
6
68
52
0
2
46
1.12
38042--38080
20
2.0
20
94
0
69
58
0
5
35
1.20
38571--38717
64
2.3
64
76
6
147
44
25
8
21
1.81
38637--38740
32
3.2
32
83
0
109
43
26
9
20
1.82
39370--39841
180
2.6
181
88
1
678
42
13
16
27
1.86
39583--39628
20
2.3
19
89
10
74
56
10
15
17
1.67
39762--39808
20
2.4
19
82
10
67
53
10
17
19
1.72
39771--39813
20
2.3
19
88
11
63
51
11
16
20
1.75
41902--41945
15
2.9
15
96
0
79
20
11
54
13
1.69
42107--42172
33
2.0
33
90
0
105
28
0
48
22
1.51
43962--44010
19
2.6
19
96
0
89
32
2
10
55
1.45
44123--44828
200
3.6
200
85
7
968
36
15
17
29
1.91
44366--44736
179
2.1
179
94
0
652
35
15
18
30
1.92
44809--44842
14
2.4
14
90
0
50
35
20
20
23
1.96
44823--45264
183
2.4
183
94
0
785
34
14
16
34
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48110--48182
23
3.2
23
90
0
119
36
5
19
38
1.75
48098--48182
46
1.9
44
85
7
118
40
4
18
36
1.72
54110--54139
15
2.0
15
100
0
60
40
26
6
26
1.81

Tables:   1

The End!