Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007592.1 Hibiscus syriacus cultivar Beakdansim tig00021875_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81369

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15489--15522
9
3.9
9
92
7
61
35
0
0
64
0.94
15489--15526
17
2.3
17
95
4
69
34
0
0
65
0.93
15462--15540
21
4.0
21
73
23
64
32
1
1
64
1.09
17728--17771
13
3.4
13
80
0
52
15
2
13
68
1.31
27596--27647
15
3.5
15
89
0
77
7
65
17
9
1.45
31017--31146
31
4.2
31
76
7
86
32
22
19
26
1.97
31039--31167
63
2.1
61
87
7
188
32
20
20
27
1.97
31042--31169
31
4.1
31
80
9
152
33
21
18
26
1.96
32056--32101
21
2.2
21
92
0
74
15
23
28
32
1.95
34828--34886
23
2.5
23
82
15
68
13
20
10
55
1.66
42909--42990
40
2.0
40
97
0
155
32
17
8
41
1.79
44282--44399
32
3.6
32
78
5
103
40
26
11
22
1.87
46578--46602
10
2.5
10
100
0
50
40
0
0
60
0.97
60463--60526
23
2.8
23
82
0
83
25
26
28
20
1.99
60545--60759
103
2.1
103
95
0
385
38
24
11
25
1.89
67403--67466
23
2.8
22
85
4
83
26
26
26
20
1.99
67482--67701
105
2.1
103
94
1
386
37
24
12
26
1.90
68245--68287
21
2.0
21
86
0
59
16
25
27
30
1.97
70507--70556
23
2.2
23
85
0
64
24
24
22
30
1.99
70994--71032
13
3.0
13
85
10
53
35
10
2
51
1.50
71824--72281
227
2.0
227
99
0
907
26
13
17
43
1.85
72882--72922
22
1.9
21
85
5
55
24
34
24
17
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75668--75707
12
3.4
12
79
6
55
20
22
22
35
1.96
75632--75720
23
3.8
23
90
1
124
24
23
23
28
2.00
75709--75741
17
1.9
17
93
0
57
33
27
15
24
1.95
77940--78005
23
2.9
23
79
0
78
21
27
21
30
1.98

Tables:   1

The End!