Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000760.1 Hibiscus syriacus cultivar Beakdansim tig00001477_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80581

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3207--3236
12
2.5
12
94
0
51
20
20
0
60
1.37
3271--3304
16
2.2
16
90
10
54
11
2
2
82
0.89
4469--4516
23
2.1
23
88
0
69
35
2
4
58
1.29
8419--8444
12
2.2
12
100
0
52
7
0
7
84
0.77
9060--9133
37
2.0
37
82
7
89
48
5
1
44
1.34
14536--14590
22
2.7
20
76
20
67
60
1
0
38
1.08
15494--15527
2
17.0
2
100
0
68
50
0
0
50
1.00
21814--21989
54
3.3
54
90
0
253
20
27
31
20
1.97
21861--22018
54
2.9
54
87
3
167
22
27
31
18
1.97
26137--26179
15
2.9
15
89
0
68
62
18
11
6
1.50
26769--26806
3
12.7
3
100
0
76
31
0
0
68
0.90
38808--38894
36
2.5
36
81
9
92
33
34
12
19
1.90
52577--52703
60
2.1
60
86
2
175
33
22
6
37
1.80
66429--66486
29
2.0
29
93
0
98
24
10
31
34
1.89
74891--74920
15
2.0
15
93
0
51
50
13
30
6
1.67
76720--76795
21
3.4
21
66
16
62
30
5
9
55
1.54
77673--77899
113
2.0
113
92
0
382
31
14
17
36
1.90

Tables:   1

The End!