Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007603.1 Hibiscus syriacus cultivar Beakdansim tig00022090_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35532

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
849--1122
136
2.0
139
90
7
436
36
14
14
34
1.87
1509--1578
28
2.4
31
80
7
83
50
2
2
44
1.31
4421--4459
20
2.0
20
85
5
53
30
2
7
58
1.39
4605--4670
30
2.2
29
84
7
80
51
3
3
42
1.32
7689--7738
18
2.8
18
77
22
52
46
2
4
48
1.32
9297--9327
6
5.0
6
96
4
53
32
3
0
64
1.09
14159--14207
20
2.3
22
75
17
57
26
2
44
26
1.65
14211--14245
13
2.7
13
86
13
54
37
8
8
45
1.65
18530--18571
22
2.0
22
90
4
68
59
2
0
38
1.10
23419--23474
19
3.1
17
74
23
51
53
1
0
44
1.11
23419--23473
20
2.8
19
75
22
60
54
1
0
43
1.10
23462--23497
17
2.1
18
89
5
56
66
0
0
33
0.92
25120--25156
2
19.0
2
94
5
67
48
0
0
51
1.00
30157--30189
16
2.1
16
100
0
66
48
0
6
45
1.27
32737--32778
20
2.1
20
86
0
57
38
4
4
52
1.44

Tables:   1

The End!