Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007604.1 Hibiscus syriacus cultivar Beakdansim tig00022304_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89696

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1390--1455
24
2.8
24
95
0
114
25
27
16
30
1.97
1790--1818
14
2.1
14
100
0
58
13
27
20
37
1.91
20591--20636
18
2.6
18
100
0
92
4
10
30
54
1.55
27894--27955
32
1.9
32
96
0
115
38
22
9
29
1.86
28558--28603
16
2.8
17
83
6
58
13
15
19
52
1.75
42194--42224
7
4.4
7
95
0
53
0
67
0
32
0.91
47045--47078
17
2.0
17
100
0
68
17
23
35
23
1.95
48625--48658
16
2.1
17
94
5
61
29
2
23
44
1.68
49202--49255
27
2.0
27
96
0
99
48
24
5
22
1.72
49271--49327
28
2.0
28
100
0
114
21
31
10
36
1.87
52494--52588
31
3.1
31
100
0
190
47
6
15
30
1.71
58990--59055
24
2.8
24
95
0
114
25
27
16
30
1.97
59390--59418
14
2.1
14
100
0
58
13
27
20
37
1.91
78192--78237
18
2.6
18
100
0
92
4
10
30
54
1.55
85488--85549
32
1.9
32
96
0
115
38
22
9
29
1.86
86151--86196
16
2.8
17
83
6
58
13
15
19
52
1.75

Tables:   1

The End!