Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007613.1 Hibiscus syriacus cultivar Beakdansim tig00022665_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95908

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2778--2802
2
12.5
2
100
0
50
48
0
0
52
1.00
4577--4601
13
1.9
13
100
0
50
52
0
0
48
1.00
5951--5981
2
15.5
2
93
0
53
45
3
0
51
1.17
13682--13738
19
2.9
19
72
15
53
50
5
1
42
1.35
14174--14211
2
19.0
2
100
0
76
50
0
0
50
1.00
15901--15969
25
2.8
24
67
6
66
44
15
5
33
1.71
16588--16702
24
4.8
24
84
8
126
40
19
14
26
1.90
27914--27955
21
2.0
22
86
13
63
42
2
0
54
1.13
29649--29709
3
21.0
3
77
12
65
65
3
0
31
1.09
29649--29709
23
2.6
23
84
7
70
65
3
0
31
1.09
29836--30402
76
7.5
76
95
1
976
34
21
20
23
1.97
31246--31300
22
2.5
22
84
0
74
45
9
10
34
1.71
33836--34055
114
1.9
114
93
0
377
30
21
14
33
1.93
38230--38268
14
2.8
14
85
11
53
58
7
17
15
1.59
40629--40679
21
2.5
21
84
9
61
66
1
7
23
1.28
41120--41380
145
1.8
145
82
6
341
45
7
8
38
1.62
42848--42902
3
19.0
3
76
14
53
63
1
0
34
1.05
42848--42897
11
4.5
12
78
11
54
62
2
0
36
1.07
42848--42897
14
3.4
15
78
10
50
62
2
0
36
1.07
45192--45340
65
2.3
65
82
3
167
30
16
21
30
1.96
45680--45714
13
2.7
13
86
13
54
45
8
8
37
1.65
50109--50140
2
16.0
2
100
0
64
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51479--51529
2
25.5
2
100
0
102
49
0
0
50
1.00
52611--52655
22
2.1
22
84
8
58
46
2
4
46
1.35
55820--55912
12
7.8
12
70
9
55
51
17
12
18
1.76
55819--55926
24
4.5
24
80
2
119
51
16
12
18
1.75
64808--64839
2
16.0
2
100
0
64
50
0
0
50
1.00
67327--67371
22
2.1
22
84
8
58
46
2
4
46
1.35
67583--67640
18
3.2
18
75
20
57
48
3
1
46
1.29
68046--68083
2
19.0
2
100
0
76
50
0
0
50
1.00
76357--76407
22
2.4
22
80
3
59
41
1
1
54
1.22
76625--76676
23
2.2
24
83
10
63
46
3
1
48
1.31
78221--78251
2
15.5
2
93
0
53
45
0
3
51
1.17
80406--80450
22
2.1
21
84
12
56
20
4
26
48
1.68
83305--83401
43
2.3
43
96
0
176
16
27
23
31
1.96
86206--86242
2
18.5
2
100
0
74
48
0
0
51
1.00
87480--87557
21
3.6
21
73
15
70
50
2
2
44
1.29
90231--90388
64
2.5
64
83
5
178
31
24
18
25
1.98

Tables:   1

The End!