Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007621.1 Hibiscus syriacus cultivar Beakdansim tig00023055_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47828

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--5923
300
19.9
302
91
3
9529
24
22
26
25
2.00
6513--6579
22
3.0
22
100
0
134
26
26
26
19
1.99
6799--6856
30
1.9
30
86
6
82
34
24
6
34
1.82
6871--6942
29
2.5
29
90
0
108
38
12
11
37
1.79
7242--7390
65
2.2
67
84
8
189
20
28
24
26
1.99
7370--7412
21
2.0
21
86
0
59
16
25
27
30
1.97
7242--7415
66
2.6
63
82
11
172
20
28
24
27
1.99
13440--13506
22
3.0
22
100
0
134
26
26
26
19
1.99
13726--13783
30
1.9
30
86
6
82
34
24
6
34
1.82
13798--13869
29
2.5
29
90
0
108
38
12
11
37
1.79
14171--14322
68
2.2
68
86
4
200
19
28
25
26
1.99
14302--14344
21
2.0
21
86
0
59
16
25
27
30
1.97
14171--14344
67
2.6
67
83
7
183
19
28
25
27
1.99
15041--47825
303
109.3
303
86
7
38608
24
23
26
25
2.00
15041--47825
604
55.2
606
92
4
53637
24
23
26
25
2.00
33688--33764
37
2.0
39
92
5
131
14
12
49
23
1.78

Tables:   1

The End!