Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007624.1 Hibiscus syriacus cultivar Beakdansim tig00023110_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55001

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
783--825
23
1.9
23
86
13
63
44
0
9
46
1.35
935--964
11
2.7
11
94
0
51
53
0
0
46
1.00
4009--4061
18
2.9
18
75
5
54
52
3
0
43
1.19
4111--4140
11
2.7
11
94
0
51
53
0
0
46
1.00
5760--5801
2
21.5
2
90
4
68
50
0
0
50
1.00
5754--5801
19
2.6
19
86
3
62
47
2
2
47
1.25
5754--5799
21
2.2
21
88
0
65
47
2
2
47
1.26
5763--5813
23
2.2
23
86
6
68
52
3
1
41
1.31
7560--7618
2
30.0
2
96
3
111
49
0
0
50
1.00
10766--10803
2
19.0
2
100
0
76
50
0
0
50
1.00
19966--20097
24
5.5
24
81
3
149
40
18
12
28
1.87
20043--20078
12
3.0
12
84
15
56
41
22
8
27
1.82
29457--29496
2
20.0
2
100
0
80
50
0
0
50
1.00
33929--33970
21
2.0
22
86
13
63
42
2
0
54
1.13
34600--34624
13
1.9
13
100
0
50
56
8
12
24
1.62
35642--35700
3
20.3
3
76
13
61
66
3
0
30
1.08
35641--35699
14
4.1
14
81
14
68
64
3
0
32
1.10
35654--35700
17
2.8
17
81
12
62
68
2
0
29
1.02
35642--35700
23
2.5
23
83
8
66
66
3
0
30
1.08
35827--36392
76
7.5
76
94
1
958
34
21
20
23
1.97
37236--37290
22
2.5
22
81
0
74
43
10
10
34
1.75
39823--40042
114
1.9
114
93
0
377
30
21
14
33
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44205--44237
15
2.3
15
89
5
50
57
9
18
15
1.63
46600--46641
21
2.0
20
86
13
59
66
0
7
26
1.17
47036--47100
31
2.1
32
82
8
80
43
6
1
49
1.37
47162--47224
29
2.1
29
83
13
76
63
1
0
34
1.04
47732--47756
13
1.9
13
100
0
50
56
8
12
24
1.62
48761--48809
3
16.0
3
81
12
55
63
2
0
34
1.06
48761--48806
17
2.8
17
83
6
60
63
2
0
34
1.07
48761--48813
17
3.2
17
76
12
56
64
1
0
33
1.05
48762--48809
13
3.6
13
81
10
53
64
2
0
33
1.05
51067--51215
65
2.3
65
82
3
167
30
16
21
30
1.96
51551--51585
13
2.7
13
86
13
54
45
8
8
37
1.65

Tables:   1

The End!