Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007640.1 Hibiscus syriacus cultivar Beakdansim tig00024058_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29177

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
486--1327
321
2.6
320
78
12
845
25
24
24
26
2.00
1976--2661
332
2.1
332
98
0
1318
23
25
25
26
2.00
2638--3560
318
2.8
324
81
8
981
24
24
23
26
2.00
4536--5468
327
2.8
329
82
7
1049
24
24
23
26
2.00
6115--6800
332
2.1
332
98
0
1336
22
25
25
26
2.00
6777--7689
328
2.8
316
81
8
903
24
24
23
26
2.00
8338--9022
331
2.1
332
98
0
1309
22
25
25
26
2.00
8999--9919
328
2.8
331
81
8
1065
24
24
23
27
2.00
11280--12118
321
2.6
315
78
10
822
24
24
23
27
2.00
11280--12118
323
2.6
315
78
10
824
24
24
23
27
2.00
12857--13679
339
2.4
336
82
5
953
25
23
23
28
2.00
15043--17320
35
64.7
35
97
1
4176
20
37
33
8
1.83
18982--19897
340
2.7
338
81
5
931
28
23
22
25
1.99
25247--26092
323
2.6
319
79
10
860
24
24
22
28
1.99
25180--26280
334
3.3
326
75
12
1002
24
24
23
27
2.00
27326--28155
323
2.6
314
79
9
836
24
24
23
28
2.00

Tables:   1

The End!