Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007642.1 Hibiscus syriacus cultivar Beakdansim tig00024296_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74908

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--945
13
71.4
14
85
10
244
37
43
3
15
1.63
1--945
20
47.6
21
84
10
244
37
43
3
15
1.63
2--2374
7
352.6
7
88
10
2508
30
42
11
14
1.82
2070--5847
7
554.6
7
93
5
6159
27
42
15
14
1.86
6090--6167
7
10.4
7
74
15
50
47
24
1
26
1.60
6134--6173
17
2.4
17
91
0
62
47
25
2
25
1.64
6160--6209
19
2.6
19
90
3
73
46
24
0
30
1.53
5840--6435
10
61.0
10
73
8
248
42
26
4
26
1.74
20809--20865
24
2.4
24
87
0
78
22
33
17
26
1.96
23901--23941
20
2.0
22
85
9
59
53
2
0
43
1.13
24323--24363
22
1.9
21
90
5
64
41
34
0
24
1.55
35344--35413
27
2.6
27
84
6
90
55
18
8
17
1.66
36348--36382
6
5.8
6
100
0
70
0
48
0
51
1.00
36379--36418
5
7.6
5
89
10
62
0
20
0
80
0.72
43749--43829
27
3.0
27
79
13
94
27
37
19
16
1.93
43783--43925
63
2.3
63
92
3
243
22
32
22
22
1.98
45756--45792
2
18.5
2
100
0
74
51
0
0
48
1.00
57960--58080
18
7.8
15
73
17
63
47
5
4
42
1.49
57961--58016
18
3.0
20
82
15
75
46
5
1
46
1.36
58008--58079
28
2.6
26
84
8
81
45
5
6
41
1.54
58008--58080
13
5.3
13
79
9
74
46
5
6
41
1.54
57960--58162
17
11.2
17
70
21
76
47
3
5
42
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58116--58255
2
72.0
2
69
18
82
47
1
5
45
1.33
58036--58219
89
2.1
88
90
3
289
48
2
4
44
1.38
58087--58251
33
5.5
28
69
21
86
47
1
4
46
1.31
62059--62129
27
2.6
27
86
4
99
56
18
8
16
1.65
63098--63132
6
5.8
6
100
0
70
0
48
0
51
1.00
63129--63168
5
7.6
5
89
10
62
0
20
0
80
0.72
70470--70550
27
3.0
27
79
13
94
27
37
19
16
1.93
70504--70645
62
2.3
63
91
4
234
22
33
21
22
1.98
72275--72312
20
1.9
20
84
10
51
42
7
5
44
1.56
72441--72479
2
19.5
2
100
0
78
51
0
0
48
1.00

Tables:   1

The End!