Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007646.1 Hibiscus syriacus cultivar Beakdansim tig00024549_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48302

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--23880
290
80.6
302
81
11
25650
24
22
27
26
2.00
13432--23880
296
35.0
302
80
12
10494
24
22
26
26
2.00
15183--15360
91
2.0
88
95
3
320
23
19
30
26
1.98
15281--23940
588
14.6
593
85
10
10956
24
22
26
26
2.00
15271--23898
291
29.1
294
85
10
10861
24
22
26
26
2.00
23955--24910
299
3.3
298
89
4
1450
24
22
26
26
2.00
24839--24975
67
1.9
74
90
10
225
22
16
32
27
1.96
24912--26751
303
6.2
303
92
2
2897
24
22
26
26
2.00
26786--37277
303
34.6
303
80
9
8254
24
22
26
25
2.00
26786--48302
605
35.4
606
80
10
20678
24
23
26
25
2.00
26786--29552
302
9.2
303
93
1
4467
24
22
26
26
2.00
29479--29640
82
1.9
84
95
5
292
24
18
30
27
1.98
29566--37277
303
25.6
303
85
7
8956
24
23
26
25
2.00
37280--48302
894
12.3
901
94
3
18642
24
23
26
25
2.00
37279--48302
302
37.0
302
94
3
18967
24
23
26
25
2.00

Tables:   1

The End!