Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007648.1 Hibiscus syriacus cultivar Beakdansim tig00024749_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33999

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
78--166
33
2.7
33
89
1
126
20
35
28
15
1.93
249--334
34
2.6
34
90
3
131
20
34
29
15
1.93
419--606
33
5.6
33
77
13
188
17
35
31
15
1.91
1--525
169
3.1
170
91
5
854
16
32
34
16
1.92
411--627
106
2.1
102
93
3
371
16
34
34
15
1.90
527--609
29
2.7
31
88
7
116
16
38
30
14
1.89
13647--13731
33
2.6
33
88
1
118
20
34
29
16
1.94
13511--14090
169
3.4
170
94
1
1017
17
33
33
16
1.92
13816--13900
33
2.6
33
90
1
127
20
35
29
15
1.93
13985--14177
32
5.7
32
76
15
183
17
36
31
15
1.91
14085--14174
33
2.8
32
88
3
126
17
35
32
14
1.90
13977--14196
106
2.1
105
96
0
404
16
34
33
15
1.91
14564--14595
11
2.9
11
95
0
55
9
40
37
12
1.75
26930--27505
166
3.4
169
92
5
963
17
33
31
17
1.93
27231--27310
33
2.5
32
87
4
108
18
36
28
16
1.93
27401--27586
31
5.6
32
72
17
148
17
36
30
16
1.92
27393--27608
103
2.1
104
93
4
366
16
34
32
16
1.91
27969--28000
11
2.9
11
95
0
55
9
40
37
12
1.75

Tables:   1

The End!