Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007651.1 Hibiscus syriacus cultivar Beakdansim tig00024910_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41427

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
216--300
33
2.6
33
88
1
118
20
34
29
16
1.94
385--474
33
2.9
31
87
8
114
17
37
30
14
1.90
552--739
31
5.6
32
74
15
166
17
36
30
15
1.92
81--657
169
3.4
170
94
2
1006
16
33
32
16
1.92
544--761
104
2.1
105
94
2
386
16
34
32
16
1.91
1126--1157
11
2.9
11
95
0
55
9
40
37
12
1.75
9146--9230
33
2.6
33
88
1
118
20
34
29
16
1.94
9313--9396
32
2.6
32
86
5
116
20
35
28
15
1.93
9480--9668
33
5.6
33
76
13
179
17
35
30
15
1.91
9011--9585
167
3.4
168
93
2
980
17
33
32
16
1.92
9480--9668
64
2.8
66
73
14
179
17
35
30
15
1.91
9472--9690
105
2.1
105
97
0
411
16
34
32
15
1.91
10053--10084
11
2.9
11
95
0
55
9
40
37
12
1.75
27209--27293
33
2.6
33
88
1
118
20
34
29
16
1.94
27072--27653
169
3.4
170
96
0
1051
17
33
33
16
1.92
27378--27462
33
2.6
33
90
1
127
20
35
29
15
1.93
27547--27737
33
5.6
33
77
11
197
17
35
31
15
1.91
27547--27737
65
2.8
66
74
13
197
17
35
31
15
1.91
27539--27759
106
2.1
106
97
0
415
16
34
33
15
1.91
28128--28159
11
2.9
11
95
0
55
9
40
37
12
1.75
36222--36306
33
2.6
33
88
1
118
20
34
29
16
1.94
36085--36666
169
3.4
170
95
0
1042
17
33
32
16
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36391--36475
33
2.6
33
90
1
127
20
35
29
15
1.93
36560--36749
33
5.6
33
77
11
188
17
35
31
15
1.91
36552--36771
106
2.1
105
96
0
404
16
34
33
15
1.91
37141--37172
11
2.9
11
95
0
55
9
40
37
12
1.75

Tables:   1

The End!