Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007654.1 Hibiscus syriacus cultivar Beakdansim tig00025002_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90320

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--90320
301
300.7
302
89
6
115101
24
23
26
25
2.00
58293--58714
231
1.8
231
94
0
754
22
25
25
26
2.00
58524--58921
207
1.9
208
91
1
656
22
26
24
27
2.00
58719--66675
303
26.3
303
82
9
9136
24
23
26
25
2.00
60827--61237
208
2.0
207
93
1
698
22
26
24
26
2.00
61335--61738
204
2.0
205
92
2
670
22
26
23
27
2.00
61538--66675
298
17.3
302
93
3
8574
24
22
26
25
2.00
61538--66675
896
5.8
899
94
3
8691
24
22
26
25
2.00
66436--66923
248
2.0
248
92
1
809
26
22
24
26
2.00
66684--69908
598
5.4
601
93
3
5356
25
22
26
25
2.00
66684--69908
897
3.6
899
93
2
5414
25
22
26
25
2.00
69672--70149
241
2.0
244
91
4
781
25
22
25
26
2.00
69917--90320
297
68.7
301
92
4
33995
25
22
26
26
2.00

Tables:   1

The End!