Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01007661.1 Hibiscus syriacus cultivar Beakdansim tig00025625_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 40010
ACGTcount: A:0.37, C:0.17, G:0.17, T:0.29
Found at i:268 original size:72 final size:71
Alignment explanation
Indices: 13--805 Score: 353
Period size: 75 Copynumber: 10.9 Consensus size: 71
3 TCAACCCGAC
* * **
13 AAAATCTTTTTTTTTCGAGGGAAACTATTTCAAGCGAGA-AAAATCTT-T-TTT-ACGGAAACCC
1 AAAATC-TTTTGTTTCGA-GGAAA--ATCTCAAGCGAGATAAAATCTTCTGTTTCA-GGAAACTA
* *
74 TCTCAGCGCGAT
61 TCTCA-AGAGAT
* * * * *
86 AAAATCTTATGTTTCAAGGGAACCATCTCAAGCGAGATAAAACTCTTCTATTTCATGGGAAGCTA
1 AAAATCTTTTGTTTCGA-GGAA-AATCTCAAGCGAGATAAAA-TCTTCTGTTTCA--GGAAACTA
*
151 TCTCAAGCGAT
61 TCTCAAGAGAT
* * *
162 AAAATCTTTT-TTTCGAGGGAACTCTCAAGCGAGATAAAATCTTCTGTCTCAGGAAACTATCTCA
1 AAAATCTTTTGTTTCGAGGAAAATCTCAAGCGAGATAAAATCTTCTGTTTCAGGAAACTATCTCA
226 A-AGAT
66 AGAGAT
* * *
231 AAAATCTTTCTGTTTCGAGCGAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGAAAATAT
1 AAAATCTTT-TGTTTCGAG-GAAA-ATCTCAAGCGAGATAAAATCTTCTG-TTTCAGGAAACTAT
295 CTCAAGCGAGAT
62 CTCAA--GAGAT
* * * * *
307 AAAATCTTTTTGTTTCGA-GAAACTATCTTAAGCGAGA-CAAATCATCTATTTGGACGGAAACTA
1 AAAATC-TTTTGTTTCGAGGAAA--ATCTCAAGCGAGATAAAATCTTCTGTTT-CA-GGAAACTA
*
370 TCTCAAGAGAAA
61 TCTCAAGAG-AT
* * * * * * * * * *
382 AAAATCTTCTAG-TT-GAAAGAAACTATCCAGTGAGATAAAA-ATTATATTTCA--AACCTA-CT
1 AAAATCTT-TTGTTTCG-AGGAAAATCTCAAGCGAGATAAAATCTTCTGTTTCAGGAAACTATCT
441 CAAGCGAGAT
64 CAA--GAGAT
* *
451 AAAATCTTCT-TTT-GAAGG-AACTCTC-AGCGAGA-AAAATCTTCT-TTT---G-AACATATCT
1 AAAATCTTTTGTTTCG-AGGAAAATCTCAAGCGAGATAAAATCTTCTGTTTCAGGAAAC-TATCT
*
506 CAAACAAGAT
64 C-AA-GAGAT
* * * *
516 -AAATCTTCTGTTTCGAGGGAAACTATCTC-AGCGAGACAAAATATTCTGTTTGAGGGAAACTAT
1 AAAATCTTTTGTTTCGA-GGAAA--ATCTCAAGCGAGATAAAATCTTCTGTTTCA-GGAAACTAT
*
579 ATCAAGCGAGA-
62 CTCAA--GAGAT
* * * *
590 AAAATCTTTTTTTTCGAGGGAAACTATCTCAAGCGA-AAAAAATCTTCTGTTTCGAGGGAACTGT
1 AAAATCTTTTGTTTCGA-GGAAA--ATCTCAAGCGAGATAAAATCTTCTGTTTC-AGGAAACTAT
* * *
654 CTAAAGCGGAC
62 CTCAAG-AGAT
* * * *
665 AAAA-CTTCTGTTTCGA-GAACTATCT-AAGCGTGACAAAATCTTCTGTTTC-GAGAAACTATCT
1 AAAATCTTTTGTTTCGAGGAA-AATCTCAAGCGAGATAAAATCTTCTGTTTCAG-GAAACTATCT
*
726 CATGCGAGAT
64 CA--AGAGAT
* * *
736 AAAAT-TTTTAGTTTTCG-GGAAACTATCTC-AGCGAGACAACATCTTATGTTTCGAGGGAAACT
1 AAAATCTTTT-G-TTTCGAGGAAA--ATCTCAAGCGAGATAAAATCTTCTGTTTC-A-GGAAACT
798 ATCTCAAG
60 ATCTCAAG
806 CGAGAGAAAA
Statistics
Matches: 567, Mismatches: 86, Indels: 133
0.72 0.11 0.17
Matches are distributed among these distances:
63 2 0.00
64 11 0.02
65 19 0.03
66 14 0.02
67 8 0.01
68 11 0.02
69 38 0.07
70 40 0.07
71 51 0.09
72 58 0.10
73 67 0.12
74 61 0.11
75 98 0.17
76 75 0.13
77 14 0.02
ACGTcount: A:0.35, C:0.18, G:0.17, T:0.30
Consensus pattern (71 bp):
AAAATCTTTTGTTTCGAGGAAAATCTCAAGCGAGATAAAATCTTCTGTTTCAGGAAACTATCTCA
AGAGAT
Found at i:594 original size:37 final size:39
Alignment explanation
Indices: 10--17567 Score: 13894
Period size: 39 Copynumber: 462.7 Consensus size: 39
1 TCTCAACCC
* * *
10 GACAAAATCTTTTTTTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGA
* ** *
50 GA-AAAATCTT-T-TTT--ACGGAAACCCTCTC-AGCGC
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
83 GATAAAATCTTATGTTTCAAGGG-AACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
121 GATAAAACTCTTCTATTTC-ATGGGAAGCTATCTCAAGC--
1 GACAAAA-TCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* *
159 GATAAAATCTT-TTTTTCGAGGG-AAC--TCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
194 GATAAAATCTTCTGTCTC-A-GGAAACTATCTCAA---A
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
228 GATAAAATCTTTCTGTTTCGAGCGAAA-GAT-TCAAGCGA
1 GACAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
266 GATAAAATCTTCTGTTTTGA-CGAAAATATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
304 GATAAAATCTTTTTGTTTCGA--GAAACTATCTTAAGCGA
1 GACAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
342 GAC-AAATCATCTATTTGGACGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* ** *
380 -AAAAAATCTTCTAG-TT-GAAAGAAACTATC-C-AGTGA
1 GACAAAATCTTCT-GTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
415 GATAAAA-ATTATATTTC-A---AACCTA-CTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
448 GATAAAATCTTCT-TTT-GAAGG-AAC--TCTC-AGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
481 GA-AAAATCTTCT-TTT-GA---ACA-TATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
513 GA-TAAATCTTCTGTTTCGAGGGAAACTATCTC-AGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
550 GACAAAATATTCTGTTT-GAGGGAAACTATATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
588 GA-AAAATCTTTTTTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
626 -AAAAAATCTTCTGTTTCGAGGG-AACTGTCTAAAGCG-
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
662 GACAAAA-CTTCTGTTTCGA--G-AACTATCT-AAGCGT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
696 GACAAAATCTTCTGTTTCGA--GAAACTATCTCATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
733 GATAAAAT-TTTTAGTTTTC--GGGAAACTATCTC-AGCGA
1 GACAAAATCTTCT-G-TTTCGAGGGAAACTATCTCAAGCGA
* *
770 GACAACATCTTATGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
809 GAGAAAAAT-ATCTATTT-GAGGG-AACTATCTCAAGTGA
1 GA-CAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
846 G---AAATCTTCTATTTCTGA--GAAACTATCTTAAGC-A
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** * * **
880 GTTAAAA-GTTCTATTTC-AGGGAAACTATCTC-AGATA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
916 GATC-AAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGA
1 GA-CAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
955 GATAAAAATCTT-TGTTTCAAGGG-AACTA-CTCAAGCGA
1 GA-CAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **** * *
992 GGCTAATCTCAAACTTCTCAAGCGTGGCAAA--ATCT-ACAGTTTCGA
1 GAC-AA----AATCTTCTGTTTCGAGGGAAACTATCTCA-AG---CGA
* * * ** ***
1037 G-GAACATC-TCAAG--T-GAGACAAATCT-TCT-ATTTG-
1 GACAAAATCTTC-TGTTTCGAGGGAAA-CTATCTCAAGCGA
** **** ** * *
1070 GAGGAAA-CTATCTCAAGCGAGACAAAATCTTTTTTTCAA--GA
1 GACAAAATCT-TCTGTTTCGAG-GGAAA-C--TATCTCAAGCGA
* * ** * **
1111 GA-AACTATC-TCAAG---CGAGATAAAATAT-TCTATTTC-A
1 GACAA-AATCTTC-TGTTTCGAGGGAAACTATCTC-A-AGCGA
** **** ** ****
1147 G-GGAAA-CTATCTCAAGCGAGATAAAATCT-TCTGTTTTCGA
1 GACAAAATCT-TCTGTTTCGAG-GGAAA-CTATCT-CAAGCGA
** * ** *
1187 -AGGAAA-CTTCT-TTT-GAGCGAAAAGAT-TCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * ** *
1221 GA-TAAATCTTTTG-TTCGACAGAAAC-ATTCCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTA-T-CTCAAGCGA
* * *
1259 GACAAAATCTTTTGTTTCGA-GGAAAATCATCTCACGC-A
1 GACAAAATCTTCTGTTTCGAGGGAAACT-ATCTCAAGCGA
* * *
1297 GATAAAATCTTCTTTTTTCGA-GGAAACAATCTCAAGCGA
1 GACAAAATCTTC-TGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
1336 GATAAAATCTTATGTTTCGA-GG-AACCATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
1373 GATAAACTC-TCTGTTTC-ATGGGAAACTATCTAAAGC--
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* * * *
1409 GA-TAAATATTCTATTTC-A-GG-AAC--TCTCAAGCAA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
1442 GATAAAATCTTCTGTTTCAAAGGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
1481 GAAAAAAGCTTTTG-TACGAGGG-AACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
1518 GACATAA---TC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
1545 GACAAAATCTTATGTTTCGAGGGAAAGTATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
1584 GACAAAATATTATGTTTC-AAGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
1622 GA-AAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
1660 GA-TAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
1698 GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAA--GA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
1735 GAAAAAAT-ATCTGTTTC-AGCGAAA-GAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
1770 GATAAAATCTT-T-TTACGACGAAAACTATCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
1807 GACAAAATCTTTTGTTTCGAGGGAAAC-ATCTCATGC--
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
1843 G-TAAAATCTTATGTTTCGAGGGAAACAATCTCAAGCG-
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
1880 GA-AAAATCTTATGTTTGGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
1918 GATAAAATATTATGTTTCGA-GGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
1956 GATCAAACTCTTATGTTTC-ATGGG-AACTATCTAAAGCGA
1 GA-CAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* * *
1995 GATAAAATCTTTTG-TTCGAGGGAAACTCTCTC-AGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
2032 GATAAAATCTTATGTTTCAAGGGAAACTATCTCAA--GA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
2069 GATAAAATCTTATGTTTCGATGGAAA-AAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
2106 GATAAAATCTTCTGTTTTGACGGAAAATATCTCAA--GA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
2143 GATAAAATCTT-TTTTTCGAGAGAAACTATCTCAAG-TA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
2180 GACAAAAT-ATCTATTTGGACGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
2218 AAC-AAATCTTCTATTTCGAAAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
2256 GA-TAAATATTCTATTTC-A-AGAAACTATCTCAA-CGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
2291 GATAAAATCTTCTGTTT-GAAGGAAACTATTTCAAGC--
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
2327 GA-AAAATCTTCTATTTTGAGGG-AACATATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGA
* * *
2365 GAGAAGATCTTCTATTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
2404 GAC-AAATATTCTGTTTTGA-GG-AACT-TATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
2439 GAC-AAATCTTTTTTTTTCGA-GGAAACTATCTCAA-CGA
1 GACAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGA
* **
2476 GA-AAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCTT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
2514 GACAAAATCTTCTGTTTCGAGAGAAACTATCTCATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
2553 GATAAAATTTTCAGTTTCGAGGGAAACTATCTC-AGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
2591 G--AAAATCTTCAGTTTC-AGGGAAACTATCTCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
2627 GAC-AAATCTTCTATTTGGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
2665 GACAAAATCTTCTATTTCAAGAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
2704 GATAAAATATTCT-ATTC-AGGG-AACTA-CTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
2739 GA-TAAATCTTATGTTTCGAAGGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
2777 GAAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAA-CTGA
1 G-ACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGC-GA
* * *
2817 GACAAAATATTATGTTTCGAGGGAAACTATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
2856 GAAAAAATCTTTTGCTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
2895 GATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
2934 GATAAAATCTT-TG-TTCGA-GGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
2970 TATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
3009 GA-TAAATCTTCTGTTTCGAGGGAAACTATCTCAA--GA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
3045 GATAAAA---TC--TTT-GAGCGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
3077 GATAAAATCTTCTCTTACGACGGAAACTATCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
3116 GACAAAATCTTTTGTTTCGAGGGAAACCATCTCATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
3155 GATAAAATCTTCTGTTTCTAGGGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
3194 GAAAAAATCTTATGTTTGGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
3233 GATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
3272 GATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* * *
3311 GATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
3350 GATAAAATC-TCTTTTTTCAAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTC-TGTTTCGAGGGAAACTATCTCAAGCGA
* **
3389 GATAAAATCTTCTG---CGA-GGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
3423 GATAAAATCTT-TGTTT-GA-TGAAAATATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
3459 GATAAAATATTTTGTTTCGAGAGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
3498 GACAAAATATTCTATTTGGACGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
3537 AACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
3576 GATAAAATATTCTATTTC-AAGAAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
3614 GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * **
3653 GATAAAATATTCTGTTTTGAGCGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
3691 GATAAAATCTTCTCTTACGACGGAAACTATCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
3730 GACAAAATCTTTTGTTTCGAGGGAAACCATCTCATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
3769 GATAAAATCTTCTGTTTCGAGGGAAACAATCTCAAGC-A
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
3807 GAAAAAATCTTATGTTT-GAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
3845 GATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
3884 GA-TAACTCTTCTGTTTC-ATGGAAACTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
3921 GA-TAAATCTTTTG-TTCGAGGGAAAC--TCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
3956 GATAAAATCTTATGTTTCAAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * **
3995 GA-TAAATCTTATGTTTCGATGGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
4032 GATATAATCTTCTGTTTTGACGGAAAATATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
4071 GATAAAATCTTTTTTTTTCGAGAGAACCTATCT-TA--GA
1 GACAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
4108 GACAAAATATTCTATTTGGACGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
4147 AACAAAATCTTCTATTTCGA-AGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
4185 GA-TAAATATTCTATTTC-A-AG-AACTATATC-AGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
4219 GATAAAATC-TCTGTTT-GAAGGAAACTA--TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
4254 -A-AAAATCTTCTATTTCGAGGG-AACATATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGA
*
4291 GA-GAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
4329 GACAAAATATTCTGTTT-GAGGGAAACTA-ATCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
4366 GACAAAATCTTTTTTTTCGAGGGAAACTATCTCAA-CGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
4404 GA-AAAATCTTCTATTTCGAGGGAAACTATCTAAAGCTT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
4442 GACAAAATCTTCTGTTTCGAGAGAAACTATCTCATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
4481 GATAAAATTTTCAGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
4520 GACAAAATCTTCAGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
4559 GACAAAATATTCTATTTGGAGGG---CTATCTCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
4595 GAC--AATCTTCTATTTCTG-GAGAAACTATATTAAGCGA
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** ** *
4632 GTTAAAAGATTCTATTTC-AGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
4670 GATAAAATCTTCAGTTTCAAAGG-AACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
4708 GAAAAAAATCTT-TGTTTCGAGGTAAACTATCTCAAGCGA
1 G-ACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
4747 GGC-TAA--TTC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
4774 GGCAAAATCTACAGTTTCGAGGGAAACTATCTCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
4813 GACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
4852 GACAAAATCTTCTATTTCAAGAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
4891 GATAAAATATTCTATTTC-AGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
4929 GATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
4968 GA-AAAATCTT-TGTTTCGA-GGAAACTATCTCAA-CTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGC-GA
5004 GAC-AAATCTTCTGTTTCGA-GG-AACTATCTCAA-CGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
5039 GA-AAAATCTT-TGCTTCGAGGGAAACCAACTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
5076 GATAAAA-ATTATGTTTC-AAGGAAACCATCTCAAACGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
5113 GA-TAAATCTTTTGTTTCGA-GGAAACTCTCTCAGGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
5150 TATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
5189 GATAAAATCTTC-GTTTCGAGGGAAACTATCTCAAG-AA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
5226 GATAAAATC-TCT-TTTCGAGCGAAA-GAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
5261 GATAAAATCTTCTCTTTCGACGGAAACTATCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
5300 GACAAAATCTTTTGTTTCGAGGG-AACCATCTCATGC--
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
5336 GATAAAATCTTCTGTTTCGAGGGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
5375 GA-AAAA-ATTAT-TTT-GAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
5410 GATAAAATATTATGTTTTGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
5449 GATACACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* * *
5488 GAAAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
5527 G--AAAATCTTCTGTTACGAGGGAAACTATCTCAA--GA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
5562 GATAAAATCTTCTG-TTCGAGCGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
5599 GA-TAAAT-TTTTGTTTCGACGGAAA--AT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
5633 GATAAAATCTTCTGTTT-GA-TGAAACTATCTCAA---A
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
5667 GATAAAATCTT-T-TGTCGAGAGAAACTATCTTAAG-GA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
5703 GAC--AATATTCTATTTGGACGG-AACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * ** *
5739 AACAAAATCTTCTATTTCGAAAGAAACTATCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
5778 GACAAAATCTTTTGTTTCGAGGGAAACCATCTCATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
5817 GATAAAATCTTCTGTTTCGAGGGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
5856 GAAAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
5895 GATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
5934 GATACATTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
*
5973 G--ATAAT-TT-T-TTTCGA-GGAAAC--TCTCAAGC-A
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
6003 GA-TAAATCTTCTGTTACGAGAGAAACTATCTCAA--GA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
6039 GATAAAATCTTCTGTTTCGAGCGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* **
6077 GATAAAATCTTCTGTTTCGAGGGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
6115 GATAAAATATTCTGTTTTGATGAAAAATATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
6154 GATAAAATCTTTTGTTTCGAGAGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
6193 GACAAAATATTCTATTTGGACGGAAACTATCTCAAGC--
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* **
6230 GA-AAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
6268 GATAAAA--TTCTATTTC-A-AGAAAC--T-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
6300 GA-TAAATCTTCTGTTT-GAAGG-AACTA--TCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
6334 -A-AAAA-CTTCTATTTCGAGCG-AACTATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* **
6369 GAGAAAATCTTCTGTTTCGAATGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
6408 GACAAAATATTCTGTTT-GAGGGAAAC-ATATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
6445 GACAAAAT-TT-T-TTTCGAGGGAAACTATCTCAA-CGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
6480 GA-AAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
6518 GA-AAAATCTTCTGTTTCGAGAGAAACTATCTC-AGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
6555 GATAAAATTTTCAG-TTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
6593 GAC-AAATCTTCTGTTTCGAGGGAAACTATATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
6631 GA-AAAATATTCTATTTGGAGGGAAACTATCTCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
6669 GACAAAATCTTCTATTTCTG-GAGAAACTATCTTTAGCGA
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** * *
6708 GTTAAAA---TCT-ATAC-AGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* ** * *
6742 GA-TAAATC-TCACTTTCAAAGG-AACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
6778 GA-AAAATCTT-TTTTTCGAGGGAAACTA--TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * * * * * **
6813 GGCTAATTCTCAAACTATCTCAAGCGAGCAGAATCT-ACAGTTTCGA
1 GACAAAATCT---TCTGTTTCGAGGGA-AACTATCTCA-AG---CGA
** * ** * **
6859 GGA-ACTATC-TCAAG--T-GAGACAAA--ATCTTCTATTGA
1 -GACAAAATCTTC-TGTTTCGAGGGAAACTATC-TCAAGCGA
* * * ** *
6894 G--GAAA-CTATC----TCAAGGGACAAATAT-TCTATTTCAA
1 GACAAAATCT-TCTGTTTCGAGGGA-AACTATCTC-A-AGCGA
* **** **
6929 GA-GAAA-CTATCTCAAGCGAGATAAATTCTAT-TC-AG-G-
1 GACAAAATCT-TCTGTTTCGAGGGAAA--CTATCTCAAGCGA
* ** **
6965 GA-AACTATCTTAAG---CGAGATAAAATCT-TCTGTTTCGAAG-GAAA
1 GACAA-AATCTTCTGTTTCGAG-GGAAA-CTATC----TC-AAGCG--A
* *** * ***
7008 CTATCTTAAGTGAGAAAAAATCTTTTGTTTCGAGGAAACTATCTC-AGCGA
1 -GA-C-------A-AAATCTTCTGTT-TCGAG-GGAAACTATCTCAAGCGA
* ** * * * * * * ***
7058 GACATAATTCAAACTATCTCAAGCGAGACAAATCTTCGTTTCGA
1 GACA-AAATC-TTCTGTTTCGAGGGAAAC-TATC-TC-AAGCGA
** * * ** ** *
7102 GGGAAACTATTC---AACGAGACAAATCTTATGTTCGAAG-GA
1 GACAAAATCTTCTGTTTCGAGGGAAA-C-TAT-CTC-AAGCGA
** * ** *
7141 -A-ACTAT-TTCAAG---CGAGAAAAAATCTTTTGCTTCAAG-G-
1 GACAAAATCTTC-TGTTTCGAG-GGAAA-C-TAT-C-TCAAGCGA
* * ** * * *
7178 GA-AACCATC-TCAAG---CGAGATAAAATATTTGTTTC-AGGGAAA
1 GACAA-AATCTTC-TGTTTCGAGGGAAACTA----TCTCAAGCG--A
* * * *
7219 CCATCTCAAGCCAGATAAAATCTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 -GA---CAA---A-AT---CT-TCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
7270 GATAAAATCTT-TGTTACGAGGGAAAC--TCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
7306 GATAAAATCTTCTGTTACGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
7345 GATAAAATCTTCTGTTTCGAGCGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
7383 GATAAAATCTTTTGTTTCGACGGAAACAATCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
7422 GACAAAATCTTTTGGTTCGAGGAAAACCATCTCACGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
7461 GATAAAATCTTCTGTTTCGAGGGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
7500 GAAAAAATCGTATGTTTCGAGGAAAACCACCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
7539 GATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
7578 GATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* * * ** *
7617 GATAAAATCTTTTGTTTCAAGAAAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
7656 GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* **
7695 GATAAAATCTTCTGTTTCGAGGGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
7733 GATAAAATTTTCTGTTTTGATGGAAAATATCTCATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
7772 GATAAAATCTTTTGTTTCGAGAGAATCTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
7811 AACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * ** *
7850 AACAAAACCTTCTATTTGGAAAGAAACTATCTCAAACGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * * *
7889 GATAAAATATTATATTTC-AAGAAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
7927 GATAAAATCTTCTGTTTTGAAGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
7966 GAAAAAATCTTCTATTTCGAGGG-AACATATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGA
* * *
8005 GAGAAAATCTTTTGTTTCGAGGGAAAATATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
8044 GACAAAATATTCTGTTTTGCGGGAAACTATATCATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
8083 GACAAAATCGTT-TTTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8122 GAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8161 GACAAAATCTTTTGTTTCGAGAGAAACTATCT-ATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8199 GATAAAATTTTCAGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
8238 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
8277 GACAAAATATTATATTTGGAGGGAAACTATATCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8316 GACAAAATCTTCTATTTCTG-GAGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
* * * *
8355 GTTAAAAAAT-TT-TATTTCTG-GAGAAACTATCTTAAGCGA
1 G--ACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** ** *
8394 GTTAAAAGATTCTATTTC-AGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
8432 GATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8471 TA-AAAATCTTTTGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
8509 GGC-TAA--TTC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
8536 GGCAAAATCTACAGTTTCTAGGGAAACTATCTCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8575 GACAAAATCTTCTATTTGGAGGGAAATTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8614 GACAAAATCTTCTATTTCAAGAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
** * * *
8653 GTTAAAATATTCTATTTC-AGAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
8691 GATAAAATCTTCTGTTTCGAAGGAAACTAACTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8730 GAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCAA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
8769 GACATAA---TC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
8796 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
8835 GACAAAATCTTATGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8874 GA-TAAATCTT-TAGTTTCGACGGAAACTATCCCAAGCGA
1 GACAAAATCTTCT-GTTTCGAGGGAAACTATCTCAAGCGA
* * * *
8912 GACAAAATCTTTTGTTTCGAGGAAAACCATCTCACGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
8951 GATAAAATCGTCTGTTTCGAGGGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
8990 GAAAAAATCTTATGTTTCGAGGAAAACCATCTCAAACGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
9029 GATAAAATATTATGTTTCGAGGGAAA-TCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACT-ATCTCAAGCGA
* * * *
9068 GATAAACTCTTCTGTTTC-ATGGGAAATTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* * * *
9107 GATAAAATCTTTTGTTTCGAGGGAAGCTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
9146 GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
9185 GATAAAATCTTCTGTTTTGAGGGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * ** *
9223 GATAAAATCTGCTGTTTTGACAGAAAATATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
9262 GATAAAATCTTTTGTTTCGAGAGAATCTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
9301 AACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * **
9340 AATAAAATCTTCTATTTCGAATGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
9379 GATTAAAA-ATTCTATTTC-AAGAAAACTATCTCAAGCGA
1 GA-CAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
9417 GATAAAATCTTCTATTTTGAAGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
9456 GAAAAAATCTTCTATTTCGAGGG-AACATATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGA
* * *
9495 GAGAAAATCTTCTGTTTCGAGGGAAACTATCCCAAACGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
9534 GACAAAATATTCTGGTTT-GAGGGAAACTATATCAAGCGA
1 GACAAAATCTTCT-GTTTCGAGGGAAACTATCTCAAGCGA
* *
9573 GACAAAATCTTTTTTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
9612 GAAAAAATCTTCCGTTTCGAGGGAAACTATCTAAAGCGT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
9651 GACAAAATCTTATGTTTTGAGAGAAACTATCT-ATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
9689 GATAAAATTTTCAGTTTCGAGGGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
9728 GAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
9767 GACATAA---TC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
9794 GACAAAATCTTCTGTTTCAAGGGAAACTATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
9833 GACAAAATCTTATGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
9872 GAAAAAATCTTTTGCTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
9911 GATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
9950 GATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
** * ** *
9989 GATGAAATCTTTTGTTTCGAGCTAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
10028 GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
10067 GACAAAATCTTATGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
10106 GAAAAAATCTTTTGCTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
10145 GATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
10184 GATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
10223 GATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCAA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
10262 GATAAAATCTTCTATTTCGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
10301 GATAAAATCTTCTGTTTCGAGCGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
10339 GATAAAATCTTTTGTTTCGACGGAAACTATCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * **
10378 GACAAAATCTTTTGTTTCGAGGAAAACCATCTCTCGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
10417 GATAAAATCTTATGTTTCGAGGGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
10456 GAAAAAATCTTATGTTTTGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
10495 GATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
10534 GATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* * * *
10573 GATAAAATCTTTTGTTTCGAGGGAAACTCTATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
10612 GATAAAATCTTCTGTTTCGAGGG-AACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
10650 GATAAAATCTTCTGTTTCAAGGGTAAA-GAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGG-AAACTATCTCAAGCGA
* * * *
10688 GATAAAATCTTCTGTTTTGACGGAAAATATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
10727 GATAAAATCTTTTGTTTCGAGAGAATCTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
10766 AACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
10805 AACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
10844 GA-TAAATATTCTATTTC-AAGAAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
10881 GATAAAATCTTCTGTTTTGAAGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
10920 GAAAAAATCTTCTATTTCGAGGG-AACATATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGA
* *
10959 GAGAAAATCTTCTCTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
10998 GATAAAATATTCTGTTTTGAGGGAAATTATATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
11037 GACAAAATCTTTTTTTTCTAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
11076 GAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
11115 GATAAAATCTTCTGTTTCGAGAGAAACTATCT-ATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
11153 GATAAAATTTTCAGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
11192 GACAAAATCTTTTGTTTCGAGGGAGACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *** * * *
11231 GACAAAATATTAAATTTTGAGGGAAACTATATCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
11270 GACAAAATCTTCTATTTC-AGGAGAAACTATCTTAAGCAA
1 GACAAAATCTTCTGTTTCGAGG-GAAACTATCTCAAGCGA
** * * * * *
11309 GTTAAAAGCTTATATTTCTG-GAGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** ** *
11348 GTTAAAAGATTCTATTTC-AGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
11386 GATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
11425 GA-AAAATCTTTTGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
11463 G-GATAA--TTC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
11490 GGCAAAATCTACAGTTTCTAGGGAAACTATCTCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
11529 GACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
11568 GACAAAATCTTCTATTTCAAGAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
** * * *
11607 GTTAAAATATTCTATTTC-AGAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
11645 GATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
11684 GAAAAAATCTTTTATTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
11723 GACATAA---TC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
11750 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
11789 GACAAAATCTTATGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
11828 GAAAAAATCTTTTGCTTCGAGGAAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
11867 GATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
11906 GATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
11945 GATAAAATCTTTTGTTTCGAGGTAAACTCTCTCAAGCAA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* ** *
11984 GATAAAATCTTCTGTTTCGAGGGAAACTAAATCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
12023 GACAAAATCTTATGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
12062 GAAAAAATCCTT-TGTTTCGAGGGACACCATCTCAAGCGA
1 GACAAAAT-CTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
12101 GATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
12140 GATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
12179 GATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
12218 GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * **
12257 GATAAAATCTTATGTTTCGAGCGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
12295 GATAAAATCTT-TGTTTCGACGGAAACTATCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * ** *
12333 GACAAAATCTTTTGTTTCGAGGAAAACCATCTCTCGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
12372 GATAAAATCTTCTGTTTCGAGGGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
12411 GA-AAAATCTTATGTTTTGAGGGAAACCATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
12449 GATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
12488 GATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* * *
12527 GATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
12566 GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * ** *
12605 GATAAAATCTTCTATTTCAAGGGAAAAGAT-TTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
12643 GATAAAATCTTTTGTTTCGAGAGAATCTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
12682 AACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
12721 AACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
12760 GATAAAATATTCTATTTC-AAGAAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * ** *
12798 GATAAAATCTTCTGTTTTGAATGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
12837 GAAAAAATCTTCTATTTTGAGGG-AACATATCTCAAACGA
1 GACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGA
** *
12876 GTGAAAATCTTCTGTTTCGAGGGAAACTTTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
12915 GACAAAATATTCTGTTTTGAGGGAAACTATATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
12954 GACAAAATCTTTTTTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
12993 GAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
13032 GACAAAATCTTTTGTTTCGAGAGAAGCTATCT-ATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
13070 GATAAAATTTTCAT-TTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTC-TGTTTCGAGGGAAACTATCTCAAGCGA
13109 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
13148 GACAAAATATTATATTTGGAGGGAAACTATATCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
13187 GACAAAATCTTCTATTTCTG-GAGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** ** * * * *
13226 GTTAAAAGATTCTATTTCTAGAGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
** ** *
13265 GTTAAAAGATTCTATTTC-AGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
13303 GATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
13342 GA-AAAATCTTTTGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
13380 GGC-TAA-----TG-CTC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * **
13407 GGCAAAATCTACAGTTTCTAGGGAAACTATCTCAAATGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
13446 GACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * ** * *
13485 GACAAAATCATCTATTTAAAGAGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
** * * *
13524 GTTAAAATATTCTATTTC-AGAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
13562 GATAAAATCTTTTGTTTCGAAGGAAACTACCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
13601 GAAAAAATCTTTTGTTTGGAGGGAAACTATCTCAA-CGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
13639 GACATAA---TC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
13666 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
13705 GACAAAATCTTTTGTTTCGAGGAAAACCATCTCACGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
13744 GATAAAATCTTCTGTTTCGAGGGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * **
13783 GAAAAAATCTTATGTTTCGAGGAAAACCGTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
13822 GATAAAATATTATGTTTTGAGGGAAACCATCTCACGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
13861 GATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGAC-A
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAG-CGA
* * *
13900 GATAAAATCTT-TAGTTTCGAGGGAAACTCTCTCAAGCAA
1 GACAAAATCTTCT-GTTTCGAGGGAAACTATCTCAAGCGA
* * *
13939 GATAAAATCTTCTATTTCGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
13978 GATAAAATCTTCTGTTTTGAGGGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
14016 GATAAAATCTTCTGTTTTGACGGAAAATATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
14055 GATAAAATCTTTTGTTTCGAGAGAATCTATCTTAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
14094 AACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * ***
14133 AACAAAATCTTCTATATCGAAATAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
14172 GATAAAATATTCTATTTC-AAGAAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
14210 GATAAAATCTTCTGTTTTGAAGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
14249 GA-AAAATATTCTATTTCGAGGG-AACATATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGA
*
14287 GAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
14326 GACAAAATATTCTGTTTTGAGGGAAACTATATCAAGCAA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
14365 GACAAAATCTTTTTTTTTCGAGGGAAACTATCTGAAGCGA
1 GACAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
14405 GAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
14444 GACAAAATCTTCTGTTTCGAGAGAAACTATCT-ATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
14482 GATAAAATTTTCAGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
14521 GACAAAATCTTCTATTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * * * *
14560 AATAAAATATTATATTTGGAGGGAAACTATATCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
14599 GACAAAATCTTCTATTTCTG-GAGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** ** * * * *
14638 GTTAAAAGATTCTATTTCTG-GAGAAACTATCTTAAGTGA
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** ** *
14677 GTTAAAAGATTCTATTTC-AGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
14715 GATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
14754 GA-AAAATCTTTTGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
14792 GGC-TAA--TTC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
14819 GGCAAAAT-TTACAGTTTCTAGGGAAACTATCTTAAGTGA
1 GACAAAATCTT-CTGTTTCGAGGGAAACTATCTCAAGCGA
* *
14858 GACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
14897 GACAAAATCTTCTATTTCAAGAGAAACTACCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
** * *
14936 GTTAAAATATTCTATTTC-AGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
14974 GATAAAATCTTCTGTTTCGAAGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
15013 GAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
15052 GACATAA---TC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
15079 GACAAAATCTTCAGTTTCGAGGGAAACTATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
15118 GACAAAATCTTATGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
15157 GA-AAATATCTTTTGCTTCGAGGGAAACCATCTCAAGCGA
1 GACAAA-ATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
15196 GATAAAATATTATGTTTCAAGGGAAAGC-ATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAA-CTATCTCAAGCGA
* * *
15235 GATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
15274 GATAAAATCTTTTGTTTCGAGGTAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
15313 GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
15352 GATAAAATCTTATGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
15391 GAAAAAATCTTTTGTTTTGACGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
15430 GAAAAAATCTTATGTTTTGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
15469 TATAAAATATTATGTTTCGAGGG-AACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
15507 GATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGA
* * * *
15546 GATAAAATCTTTTGTTTCGAGGAAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
15585 GATAAAATCTTCTGTTTTGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
15624 GATAAAATCTTCTGTTTCTAGGGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
15662 GATAAAATCTTCTGTTTTGACGGAAAATATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
15701 GATAAAATCTTTTGTTTCGAGAGAATCTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
15740 AACAAAGTCTTCTATTTGGACGAAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * **
15779 AACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
15818 GATAAAATATTCTATTTC-AAGAAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
15856 GATAAAATCTTCTGTTTTGAAGGAAACTATCTAAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
15895 GAAAAAATCTTCTATTTCGAGGG-AACATATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGA
*
15934 GAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
15973 GACAAAATATTCTGTTTTGAGGGAAACTATATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
16012 GACAAAATCTT-TTTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
16050 GAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
** *
16089 GACAAAATCTTCTGTTTCGAGAAAAACTATCT-ATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
16127 GATAAAATTTTCAGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
16166 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
16205 GACAAAATATTCTATTTGGAGGGACACTATATCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
16244 GACAAAATCTTCTATTTCTG-GAGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** ** * * * *
16283 GTTAAAAGATTCTATTTCTG-GAGAACCTATCTTAAGCGA
1 GACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGA
** ** *
16322 GTTAAAAGATTCTATTTC-AGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
16360 GATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
16399 GAAAAAATCTTTTGTTTCGAGGGAAACTATTTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
16438 GGC-TAA--TTC----TC-----AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
16465 GGCAAAATCTACAGTTTCTAGGGAAACTATCTCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
16504 GACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
16543 GACAAAATCTTCTATTTCAAGAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
** * * *
16582 GTTAAAATATTCTATTTC-AGGGAAACTATCTCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
16620 GATAAAATCTTCTGTTTCGAAGTAAACTATATTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
16659 GAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
16698 GACATAA---TC---TT------AAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
16725 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
16764 GAAAAAATCTTATGTTTCAAAGGAAACTATTTCAGGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
16803 GAAAAAATCTTTTGCTTCGAGGGAAACCATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
16842 GATAAAATATTATGTTTCAAGGGAAACAATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
16881 GATAAAATCTTTTGTTTCGAGGAAAACTCTCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
16920 GATAAAATCTTTTGTTTCGAGGTAAACTCTATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
16959 GATAAAATCTTCTGTTTCGAGGGAAACTATCTTAAGAGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * **
16998 GATAAAATCTTCTGTTTTGAGCGAAAAGAT-TCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * *
17036 AATAAAATCTTATGTTTCGACGGAAACTATCCCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
17075 GACAAAATCTTTTGTTTCGAGGGAAACTATCTTAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
17114 GACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * **
17153 AACAAAATGTTCTATTTCGAAAGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * * * *
17192 GATAAAATATTATATTTC-AAGAAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
17230 GAGAAAATCTTCTGTTTCGAAGGAAACTATCTCTAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
17269 GAAAAAATATTCTGTTTCGAGGG-AACATATCTCAAACAA
1 GACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGA
* *
17308 GAGAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
17347 GATAAAATATTCTGTTTTGAGGGAAACTATATCAAGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * *
17386 GACAAAATCTT-TTTTTCGAGGGAAACTATATCAAGCAA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
17424 GAAAAAATCTTTTGTTTCGAGGGAAACTATCTAAAGCGT
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* * * *
17463 GAAAAAATCTTTTGTTTCGAGGGAAACCATCTCATGCGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
* *
17502 GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGTGA
1 GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
*
17541 GACAAAATCTTATGTTTCGAGGGAAAC
1 GACAAAATCTTCTGTTTCGAGGGAAAC
17568 CATGTAACAC
Statistics
Matches: 14439, Mismatches: 2321, Indels: 1517
0.79 0.13 0.08
Matches are distributed among these distances:
26 12 0.00
27 245 0.02
28 13 0.00
29 2 0.00
30 29 0.00
31 37 0.00
32 93 0.01
33 119 0.01
34 296 0.02
35 389 0.03
36 642 0.04
37 1009 0.07
38 2662 0.18
39 8537 0.59
40 224 0.02
41 35 0.00
42 20 0.00
43 12 0.00
44 7 0.00
45 4 0.00
46 7 0.00
47 3 0.00
48 2 0.00
49 3 0.00
50 2 0.00
51 3 0.00
52 4 0.00
53 9 0.00
54 2 0.00
56 10 0.00
57 7 0.00
ACGTcount: A:0.37, C:0.17, G:0.18, T:0.28
Consensus pattern (39 bp):
GACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA
Found at i:1156 original size:76 final size:77
Alignment explanation
Indices: 1002--1194 Score: 215
Period size: 76 Copynumber: 2.6 Consensus size: 77
992 GGCTAATCTC
* * * * * * *
1002 AAACT-TCTCAAGCGTGGCAAAATCTACAG-TTTCG-AGG-AAC-ATCTCAAGTGAGACAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTTCGAAGGAAACTATCTCAAGCGAGAAAAATAT
*
1062 TCTATTTGGAGG
66 TCTATTTAGAGG
1074 AAACTATCTCAAGCGAGACAAAATCTT-T-TTTTC-AAGAGAAACTATCTCAAGCGAGATAAAAT
1 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTTCGAAG-GAAACTATCTCAAGCGAGA-AAAAT
1136 ATTCTATTTCAG-GG
64 ATTCTATTT-AGAGG
*
1150 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTTCGAAGGAAACT
1 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTTCGAAGGAAACT
1195 TCTTTTGAGC
Statistics
Matches: 101, Mismatches: 9, Indels: 16
0.80 0.07 0.13
Matches are distributed among these distances:
72 11 0.11
73 19 0.19
74 3 0.03
75 12 0.12
76 40 0.40
77 2 0.02
78 11 0.11
79 3 0.03
ACGTcount: A:0.37, C:0.18, G:0.17, T:0.28
Consensus pattern (77 bp):
AAACTATCTCAAGCGAGACAAAATCTTCTGTTTTCGAAGGAAACTATCTCAAGCGAGAAAAATAT
TCTATTTAGAGG
Found at i:1533 original size:27 final size:27
Alignment explanation
Indices: 1503--1554 Score: 95
Period size: 27 Copynumber: 1.9 Consensus size: 27
1493 TGTACGAGGG
*
1503 AACTATCTCAAGCGAGACATAATCTCA
1 AACTATCTCAAGCGAGACAAAATCTCA
1530 AACTATCTCAAGCGAGACAAAATCT
1 AACTATCTCAAGCGAGACAAAATCT
1555 TATGTTTCGA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
27 24 1.00
ACGTcount: A:0.42, C:0.25, G:0.12, T:0.21
Consensus pattern (27 bp):
AACTATCTCAAGCGAGACAAAATCTCA
Found at i:2587 original size:21 final size:21
Alignment explanation
Indices: 2563--2621 Score: 53
Period size: 21 Copynumber: 3.1 Consensus size: 21
2553 GATAAAATTT
2563 TCAGTTTCGAGGGAAACTATC
1 TCAGTTTCGAGGGAAACTATC
2584 TCAG---CGA--GAAA--ATC
1 TCAGTTTCGAGGGAAACTATC
2598 TTCAGTTTC-AGGGAAACTATC
1 -TCAGTTTCGAGGGAAACTATC
2619 TCA
1 TCA
2622 AGTGAGACAA
Statistics
Matches: 30, Mismatches: 0, Indels: 17
0.64 0.00 0.36
Matches are distributed among these distances:
14 3 0.10
15 4 0.13
16 4 0.13
17 1 0.03
18 4 0.13
19 4 0.13
20 3 0.10
21 7 0.23
ACGTcount: A:0.32, C:0.20, G:0.20, T:0.27
Consensus pattern (21 bp):
TCAGTTTCGAGGGAAACTATC
Found at i:4819 original size:39 final size:39
Alignment explanation
Indices: 4758--27325 Score: 9185
Period size: 39 Copynumber: 577.1 Consensus size: 39
4748 GCTAATTCTC
** * *
4758 AAACTATCTCAAGCGAGGCAAAATCTACAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
4797 AAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
4836 AAACTATCTCAAGCGAGACAAAATCTTCTATTTCAAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
4875 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
4913 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
4952 AAACTATCTTAAGCGAGA-AAAATCTT-TGTTTCGA-GG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
4988 AAACTATCTCAA-CTGAGA-CAAATCTTCTGTTTCGA-GG
1 AAACTATCTCAAGC-GAGATAAAATCTTCTGTTTCGAGGG
*
5025 -AACTATCTCAA-CGAGA-AAAATCTT-TGCTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
5060 AAACCAACTCAAGCGAGATAAAA-ATTATGTTTC-AAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
5097 AAACCATCTCAAACGAGAT-AAATCTTTTGTTTCGA-GG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
5134 AAACTCTCTCAGGCGATATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
5173 AAACTCTCTCAAGCGAGATAAAATCTTC-GTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
5211 AAACTATCTCAAG-AAGATAAAATC-TCT-TTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
5247 AAA-GAT-TCAAGCGAGATAAAATCTTCTCTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
5284 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
5323 -AACCATCTCATGC--GATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
5359 AAACAATCTCAAGCGAGA-AAAA-ATTAT-TTT-GAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
5394 AAACCATCTCAAGCGAGATAAAATATTATGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
5433 AAACCATCTCAAGCGAGATACACTCTTCTGTTTC-ATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * *
5472 AAACTATCTAAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
5511 AAACTCTCTCAAGCGAG--AAAATCTTCTGTTACGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
5548 AAACTATCTCAA--GAGATAAAATCTTCTG-TTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
5584 AAAAGAT-TCAAGCGAGAT-AAAT-TTTTGTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
5620 AAA--AT-TCAAGCGAGATAAAATCTTCTGTTT-GA-TG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
5654 AAACTATCTCAA---AGATAAAATCTT-T-TGTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
5688 AAACTATCTTAAG-GAG--ACAATATTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
5724 -AACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
5762 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
5801 AAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
5840 AAACAATCTCAAGCGAGAAAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
5879 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
5918 AAACCATCTCAAGCGAGATACATTCTTCTGTTTC-ATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
*
5957 AAACTATCTAAAGCGAGAT--AAT-TT-T-TTTCGA-GG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
5990 AAAC--TCTCAAGC-AGAT-AAATCTTCTGTTACGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
6025 AAACTATCTCAA--GAGATAAAATCTTCTGTTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
**
6062 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * *
6100 AAAAGAT-TCAAGCGAGATAAAATATTCTGTTTTGATGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
6138 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
6177 AAACTATCTTAAGCGAGACAAAATATTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* **
6216 AAACTATCTCAAGC--GA-AAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
6252 AAACTATCTCAAGCGAGATAAAA--TTCTATTTC-A-AG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
6287 AAAC--T-TCAAGCGAGAT-AAATCTTCTGTTT-GAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
6321 -AACTA--TCAAGTGA-A-AAAA-CTTCTATTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
6354 -AACTATCTCAAACAAGAGAAAATCTTCTGTTTCGAATG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
6392 AAACTATCTCAAGCGAGACAAAATATTCTGTTT-GAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
6430 AAAC-ATATCAAGCGAGACAAAAT-TT-T-TTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
6465 AAACTATCTCAA-CGAGA-AAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
6502 AAACTATCTAAAGCGTGA-AAAATCTTCTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
6540 AAACTATCTC-AGCGAGATAAAATTTTCAG-TTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
6577 AAACTATCTCAAGCGAGA-CAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
6615 AAACTATATCAAGCGAGA-AAAATATTCTATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
6653 AAACTATCTCAAGTGAGACAAAATCTTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
** * * *
6692 AAACTATCTTTAGCGAGTTAAAA---TCT-ATAC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
6726 AAACTATCTCAAGCGAGAT-AAATC-TCACTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
6763 -AACTATCTCAAGCGAGA-AAAATCTT-TTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
6799 AAACTA--TCAAGCGAGGCT-AATTCTCAAACTATCTCAAGCG
1 AAACTATCTCAAGCGA-GATAAAATCT---TCTGTTTCGAGGG
* ** ** * **
6839 AGCAGAATCT-ACAGTTTCGAGGA-ACTATC-TCAAG--T-GAGAC
1 A-AACTATCTCA-AG---CGA-GATAAAATCTTC-TGTTTCGAGGG
* ** * *
6879 AAA--ATCTTCTATTGAG--GAAA-CTATC----TCAAGGG
1 AAACTATC-TCAAGCGAGATAAAATCT-TCTGTTTCGAGGG
* ** * * * * *
6911 ACAAATAT-TCTATTTCAAGAGAAACTATCTCAAGCGAGATAAATTCTATTCAGGG
1 A-AACTATCTC-A-AGCGAGATAAA--ATCT---TC-TG-T---TTC----GAGGG
* *
6966 AAACTATCTTAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
7005 AAACTATCTTAAGTGAGAAAAAATCTTTTGTTTCGA-GG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * ** * * * *
7043 AAACTATCTC-AGCGAGACATAATTCAAACTATCTCAAGCG
1 AAACTATCTCAAGCGAGATA-AAATC-TTCTGTTTCGAGGG
* * *** ** * * ** **
7083 AGACAAATCTTCGTTTCGAGGGAAACTATTC---AACGAGAC
1 AAAC-TATC-TC-AAGCGAGATAAAATCTTCTGTTTCGAGGG
* ** * **
7122 AAATCTTATGTTCGAAG-GA-A-ACTAT-TTCAAG---CGAGAAA
1 AAA-C-TAT-CTC-AAGCGAGATAAAATCTTC-TGTTTCGAG-GG
* * * **
7160 AAATCTTTTGCTTCAAG-G-GA-AACCATC-TCAAG---CGAGAT
1 AAA-C-TAT-C-TCAAGCGAGATAA-AATCTTC-TGTTTCGAGGG
* * * * * *
7198 AAAATATTTGTTTC-AGGGAAACCATCTCAAGCCAGATAAAATCTTTGTTTCGAGGG
1 AAACTA----TCTCAAGCG--A-GA--T-AA---A-AT---CT-TCTGTTTCGAGGG
* *
7254 AAACTCTCTCAAGCGAGATAAAATCTT-TGTTACGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
7292 AAAC--TCTCAAGCGAGATAAAATCTTCTGTTACGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
7329 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
7368 AAAAGAT-TCAAGCGAGATAAAATCTTTTGTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
7406 AAACAATCCCAAGCGAGACAAAATCTTTTGGTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
7445 AAACCATCTCACGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
7484 AAACAATCTCAAGCGAGAAAAAATCGTATGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
7523 AAACCACCTCAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
7562 AAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * * **
7601 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCAAGAA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
7640 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
7679 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
7718 AAAAGAT-TCAAGCGAGATAAAATTTTCTGTTTTGATGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
7756 AAAATATCTCATGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
7795 AATCTATCTTAAGCGAAACAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * **
7834 AAACTATCTCAAGCGAAACAAAACCTTCTATTTGGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
7873 AAACTATCTCAAACGAGATAAAATATTATATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
7911 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTTGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
7950 AAACTATCTCAAGAGAGAAAAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
7989 -AACATATCTCAAACAAGAGAAAATCTTTTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
8028 AAAATATCTCAAGCGAGACAAAATATTCTGTTTTGCGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
8067 AAACTATATCATGCGAGACAAAATCGTT-TTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATC-TTCTGTTTCGAGGG
*
8106 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
8145 AAACTATCTAAAGCGTGACAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
8184 AAACTATCT-ATGCGAGATAAAATTTTCAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
8222 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
8261 AAACTATCTCAAGCGAGACAAAATATTATATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
8300 AAACTATATCAAGTGAGACAAAATCTTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** * * *
8339 AAACTATCTTAAGCGAGTTAAAAAATTTTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** *
8378 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
8416 AAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
8455 AAACTATCTCAAGCGATA-AAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **** *
8493 AAACTATTTCAAGCGAGGCTAATTCTCAAACTATCTCAAGCGAGGCA
1 AAACTATCTCAAGCGA-GATAA-----AATCT-TCTGTTTCGAGG-G
* * * * **
8540 AAATCTACAGTTTCTAG-G-GA-AACTATC-TCAAG--T-GAGAC
1 AAA-CT--A-TCTCAAGCGAGATAA-AATCTTC-TGTTTCGAGGG
* ** **** **
8578 AAA--ATCTTCTATTTG-GAG-GGAAAT-TATCTCAAGCGAGAC
1 AAACTATC-TC-A--AGCGAGATAAAATCT-TCTGTTTCGAGGG
** * * **** **
8617 AAA--ATCTTCTATTTCAAGA-GAAA-CTATCTCAAGCGAGTT
1 AAACTATC-TC-A-AGCGAGATAAAATCT-TCTGTTTCGAGGG
* ** * **** **
8656 AAAATAT-TCTATTTC-AGA-GAAA-CTATCTCAAGCGAGATA
1 AAACTATCTC-A-AGCGAGATAAAATCT-TCTGTTTCGAG-GG
**** ** * **
8695 AAATCT-TCTGTTTCGA-AGGAAA-CTAACT-TAAGCGA--G
1 AAA-CTATCTCAAGCGAGATAAAATCT-TCTGT-TTCGAGGG
** *** ** * *** * ***
8731 AAAAAATCTTTTGTTTCGAGGGAAACTATC-TCAAGCAAGACATAATCTC
1 AAACTATCTCAAG---CGAGATAAA--ATCTTC-TG--TTTC--GA-GGG
*
8780 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
8819 AAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
8858 AAACTATTTCAAGCGAGAT-AAATCTT-TAGTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGGG
* * * *
8896 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
8935 AAACCATCTCACGCGAGATAAAATCGTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
8974 AAACAATCTCAAGCGAGAAAAAATCTTATGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
9013 AAACCATCTCAAACGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
9052 AAA-TCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGG
1 AAACT-ATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * *
9091 AAATTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
9130 AAGCTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
9169 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * **
9208 AAAAGAT-TCAAGCGAGATAAAATCTGCTGTTTTGACAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
9246 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
9285 AATCTATCTTAAGCGAAACAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * **
9324 AAACTATCTCAAGCGAAATAAAATCTTCTATTTCGAATG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
9363 AAACTATCTCAAGCGAGATTAAAA-ATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGA-TAAAATCTTCTGTTTCGAGGG
* * *
9401 AAACTATCTCAAGCGAGATAAAATCTTCTATTTTGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
9440 AAACTATCTCAAGCGAGAAAAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
9479 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
9518 AAACTATCCCAAACGAGACAAAATATTCTGGTTT-GAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGGG
* * * *
9557 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
9596 AAACTATCTCAAGCGAGAAAAAATCTTCCGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
9635 AAACTATCTAAAGCGTGACAAAATCTTATGTTTTGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
9674 AAACTATCT-ATGCGAGATAAAATTTTCAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
9712 AAACTATCTTAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
9751 AAACTATCTCAAGCGAGACATAA---TC----TC-----
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
9778 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
9817 AAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
9856 AAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
9895 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
9934 AAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
9973 AAACTCTCTCAAGCGAGATGAAATCTTTTGTTTCGAGCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
10012 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
10051 AAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
10090 AAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
10129 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
10168 AAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
10207 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
10246 AAACTCTCTCAAGCAAGATAAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
10285 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
10324 AAAAGAT-TCAAGCGAGATAAAATCTTTTGTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
10362 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* ** *
10401 AAACCATCTCTCGCGAGATAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
10440 AAACAATCTCAAGCGAGAAAAAATCTTATGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
10479 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
10518 AAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* *
10557 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
10596 AAACTCTATCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
10635 -AACTATCTCAAGAGAGATAAAATCTTCTGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
10673 TAAA-GAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGG
1 -AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
10711 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
10750 AATCTATCTTAAGCGAAACAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
10789 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
10828 AAACTATCTCAAGCGAGAT-AAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
10865 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
10904 AAACTATCTCAAGCGAGAAAAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
10943 -AACATATCTCAAACAAGAGAAAATCTTCTCTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
10982 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
11021 AAATTATATCAAGCGAGACAAAATCTTTTTTTTCTAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
11060 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
11099 AAACTATCTAAAGCGTGATAAAATCTTCTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
11138 AAACTATCT-ATGCGAGATAAAATTTTCAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
11176 AAACTATCTCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *** *
11215 AGACTATCTCAAGCGAGACAAAATATTAAATTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
11254 AAACTATATCAAGTGAGACAAAATCTTCTATTTC-AGGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG-G
* * * * * * *
11293 AAACTATCTTAAGCAAGTTAAAAGCTTATATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** *
11332 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
11370 AAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
11409 AAACTATCTCAAGCGAGA-AAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * **** *
11447 AAACTATTTCAAGCGAGGATAATTCTCAAACTATCTCAAGCGAGGCA
1 AAACTATCTCAAGCGA-GATAA-----AATCT-TCTGTTTCGAGG-G
* * * * **
11494 AAATCTACAGTTTCTAG-G-GA-AACTATC-TCAAG--T-GAGAC
1 AAA-CT--A-TCTCAAGCGAGATAA-AATCTTC-TGTTTCGAGGG
* ** **** **
11532 AAA--ATCTTCTATTTG-GAG-GGAAA-CTATCTCAAGCGAGAC
1 AAACTATC-TC-A--AGCGAGATAAAATCT-TCTGTTTCGAGGG
** * * **** **
11571 AAA--ATCTTCTATTTCAAGA-GAAA-CTATCTCAAGCGAGTT
1 AAACTATC-TC-A-AGCGAGATAAAATCT-TCTGTTTCGAGGG
* ** * **** **
11610 AAAATAT-TCTATTTC-AGA-GAAA-CTATCTCAAGCGAGATA
1 AAACTATCTC-A-AGCGAGATAAAATCT-TCTGTTTCGAG-GG
**** ** ** **
11649 AAATCT-TCTGTTTCGA-AGGAAA-CTATCT-TAAGCGAGAA
1 AAA-CTATCTCAAGCGAGATAAAATCT-TCTGT-TTCGAGGG
* * * * ** ** **** **
11687 AAAATCTTTTATTTCGAG-GGAAA-CTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCA-AGCGAGATAAAATCT-TCTGTTTCGAG--------GG
*
11734 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
11773 AAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
11812 AAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
11851 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
11890 AAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
11929 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
11968 AAACTCTCTCAAGCAAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
12007 AAACTAAATCAACCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
12046 AAACTATTTCAAGCGAGAAAAAATCCTT-TGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAAT-CTTCTGTTTCGAGGG
* * * * *
12085 ACACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
12124 AAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
12163 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
12202 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
12241 AAACTATCTCAAGAGAGATAAAATCTTATGTTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** *
12280 AAAAGAT-TCAAGCGAGATAAAATCTT-TGTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
12317 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* ** *
12356 AAACCATCTCTCGTGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
12395 AAACAATCTCAAGCGAGA-AAAATCTTATGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
12433 AAACCATCTTAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
12472 AAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* *
12511 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
12550 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
12589 AAACTATCTCAAGAGAGATAAAATCTTCTATTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
12628 AAAAGAT-TTAAGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
12666 AATCTATCTTAAGCGAAACAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
12705 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
12744 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* **
12782 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAATG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
12821 AAACTATCTTAAGCGAGAAAAAATCTTCTATTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
12860 -AACATATCTCAAACGAG-TGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGAT-AAAATCTTCTGTTTCGAGGG
* * * *
12899 AAACTTTCTCAAGCGAGACAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
12938 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
12977 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
13016 AAACTATCTAAAGCGTGACAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
13055 AAGCTATCT-ATGCGAGATAAAATTTTCAT-TTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTC-TGTTTCGAGGG
*
13093 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
13132 AAACTATCTCAAGCGAGACAAAATATTATATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
13171 AAACTATATCAAGTGAGACAAAATCTTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** * * *
13210 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTCTAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * ** *
13249 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
13287 AAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
13326 AAACTATCTCAAGCGAGA-AAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **** *
13364 AAACTATTTCAAGCGAGGCTAATGCTCAAACTATCTCAAGCGAGGC
1 AAACTATCTCAAGCGA-GATAA-----AATCT-TCTGTTTCGAGGG
* ** *** **
13410 AAA--ATCT-ACAGTTTCTAG-GGAAA-CTATCTCAAAT-GAGAC
1 AAACTATCTCA-AG---CGAGATAAAATCT-TCT-GTTTCGAGGG
* ** **** **
13449 AAA--ATCTTCTATTTG-GAG-GGAAA-CTATCTCAAGCGAGAC
1 AAACTATC-TC-A--AGCGAGATAAAATCT-TCTGTTTCGAGGG
* ** * **
13488 AAAATCATCT-ATTTAAAGAGA-AACAATC-TCAAG---CGAGTT
1 AAACT-ATCTCA---AGCGAGATAA-AATCTTC-TGTTTCGAGGG
* ** * **** **
13527 AAAATAT-TCTATTTC-AGA-GAAA-CTATCTCAAGCGAGAT
1 AAACTATCTC-A-AGCGAGATAAAATCT-TCTGTTTCGAGGG
*** ** * * ** * *
13565 AAA--ATCTTTTGTTTCGA-AGGAAA-CTAC-CTTAAGCGAG
1 AAACTATCTCAAG---CGAGATAAAATCTTCTGTTTCGAGGG
** *** * ** * *** * ***
13602 AAAAAATCTTTTGTTTGGAGGGAAACTATC-TCAACGAGACATAATCTC
1 AAACTATCTCAAG---CGAGATAAA--ATCTTC--TGTTTC--GA-GGG
*
13650 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
13689 AAACTATCTCAACCGAGACAAAATCTTTTGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
13728 AAACCATCTCACGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
13767 AAACAATCTCAAGCGAGAAAAAATCTTATGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
13806 AAACCGTCTCAAGCGAGATAAAATATTATGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
13845 AAACCATCTCACGCGAGATAAACTCTTCTGTTTC-ATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
*
13884 AAACTATCTAAAGAC-AGATAAAATCTT-TAGTTTCGAGGG
1 AAACTATCTCAAG-CGAGATAAAATCTTCT-GTTTCGAGGG
* * *
13923 AAACTCTCTCAAGCAAGATAAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
13962 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
14001 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
14039 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * *
14078 AATCTATCTTAAGTGAAACAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * ***
14117 AAACTATCTCAAGCGAAACAAAATCTTCTATATCGAAAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
14156 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
14194 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
14233 AAACTATCTCAAGCGAGA-AAAATATTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
14271 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
14310 AAACTATCTCAAGCGAGACAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
14349 AAACTATATCAAGCAAGACAAAATCTTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATC-TTCTGTTTCGAGGG
* *
14389 AAACTATCTGAAGCGAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
14428 AAACTATCTAAAGCGTGACAAAATCTTCTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
14467 AAACTATCT-ATGCGAGATAAAATTTTCAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
14505 AAACTATCTCAAGCGAGACAAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
14544 AAACTATCTCAAGCGAAATAAAATATTATATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
14583 AAACTATATCAAGTGAGACAAAATCTTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** * *
14622 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * * ** *
14661 AAACTATCTTAAGTGAGTTAAAAGATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
14699 AAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
14738 AAACTATCTCAAGCGAGA-AAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **** *
14776 AAACTATTTCAAGCGAGGCTAATTCTCAAACTATCTCAAGCGAGGCA
1 AAACTATCTCAAGCGA-GATAA-----AATCT-TCTGTTTCGAGG-G
* * * * ** **
14823 AAATTTACAGTTTCTAG-G-GA-AACTATCTTAAG--T-GAGAC
1 AAA-CT--A-TCTCAAGCGAGATAA-AATCTTCTGTTTCGAGGG
* ** **** **
14861 AAA--ATCTTCTATTTG-GAG-GGAAA-CTATCTCAAGCGAGAC
1 AAACTATC-TC-A--AGCGAGATAAAATCT-TCTGTTTCGAGGG
** * * * * * **
14900 AAA--ATCTTCTATTTCAAGAGAAACTACCTCAAG---CGAGTT
1 AAACTATC-TC-A-AGCGAGATAAAAT-CTTC-TGTTTCGAGGG
* ** ** **** **
14939 AAAATAT-TCTATTTC-AG-GGAAA-CTATCTCAAGCGAGATA
1 AAACTATCTC-A-AGCGAGATAAAATCT-TCTGTTTCGAG-GG
**** ** ****
14978 AAATCT-TCTGTTTCGA-AGGAAA-CTATCTCAAGCGA--G
1 AAA-CTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGG
** *** ** **** **
15014 AAAAAATCTTTTGTTTCGAG-GGAAA-CTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCAAG---CGAGATAAAATCT-TCTGTTTCGAG--------GG
* *
15063 AAACTATCTCAAGCGAGACAAAATCTTCAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
15102 AAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
15141 AAACTATTTCAAGCGAGA-AAATATCTTTTGCTTCGAGGG
1 AAACTATCTCAAGCGAGATAAA-ATCTTCTGTTTCGAGGG
* * * *
15180 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
15219 AAAGC-ATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAA-CTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
15258 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
15297 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
15336 AAACTATCTCAAGAGAGATAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
15375 AAACTATTTCAAGCGAGAAAAAATCTTTTGTTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
15414 AAACTATCTCAAGCGAGAAAAAATCTTATGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
15453 AAACCATCTCAAGCGATATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
15492 -AACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * *
15530 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
15569 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
15608 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCTAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
15647 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
15685 AAAATATCTTAAGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * * *
15724 AATCTATCTTAAGCGAAACAAAGTCTTCTATTTGGACGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
15763 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
15802 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
15840 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
15879 AAACTATCTAAAGCGAGAAAAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
15918 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
15957 AAACTATCTCAAGCGAGACAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
15996 AAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
16034 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
16073 AAACTATCTAAAGCGTGACAAAATCTTCTGTTTCGAGAA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
16112 AAACTATCT-ATGCGAGATAAAATTTTCAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
16150 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
16189 AAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
16228 ACACTATATCAAGTGAGACAAAATCTTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** * *
16267 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * * ** *
16306 AACCTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
16344 AAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
16383 AAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **** *
16422 AAACTATTTCAAGCGAGGCTAATTCTCAAACTATCTCAAGCGAGGCA
1 AAACTATCTCAAGCGA-GATAA-----AATCT-TCTGTTTCGAGG-G
* * * * **
16469 AAATCTACAGTTTCTAG-G-GA-AACTATC-TCAAG--T-GAGAC
1 AAA-CT--A-TCTCAAGCGAGATAA-AATCTTC-TGTTTCGAGGG
* ** **** **
16507 AAA--ATCTTCTATTTG-GAG-GGAAA-CTATCTCAAGCGAGAC
1 AAACTATC-TC-A--AGCGAGATAAAATCT-TCTGTTTCGAGGG
** * * **** **
16546 AAA--ATCTTCTATTTCAAGA-GAAA-CTATCTCAAGCGAGTT
1 AAACTATC-TC-A-AGCGAGATAAAATCT-TCTGTTTCGAGGG
* ** * * * **
16585 AAAATAT-TCTATTTCAGGGA-AACTATC-TCAAG--T-GAGATA
1 AAACTATCTC-A-AGC-GAGATAA-AATCTTC-TGTTTCGAG-GG
**** * * ** * *
16624 AAATCT-TCTGTTTCGA-AGT-AAA-C-TATATTAAGCGAG
1 AAA-CTATCTCAAGCGAGA-TAAAATCTTCTGTTTCGAGGG
** *** ** * *** * ***
16660 AAAAAATCTTTTGTTTCGAGGGAAACTATC-TCAAGAGAGACATAATCTT
1 AAACTATCTCAAG---CGAGATAAA--ATCTTC---TGTTTC--GA-GGG
*
16709 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
16748 AAACTATCTCAACCGAGAAAAAATCTTATGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
16787 AAACTATTTCAGGCGAGAAAAAATCTTTTGCTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
16826 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
16865 AAACAATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
16904 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
16943 AAACTCTATCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
16982 AAACTATCTTAAGAGAGATAAAATCTTCTGTTTTGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
17021 AAAAGAT-TCAAGCGAAATAAAATCTTATGTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
17059 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
17098 AAACTATCTTAAGCGAGACAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
17137 AAACTATCTCAAGCGAAACAAAATGTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
17176 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
17214 AAACTATCTCAAGCGAGAGAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
17253 AAACTATCTCTAGTGAGAAAAAATATTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
17292 -AACATATCTCAAACAAGAGAAAATCTTTTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
17331 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
17370 AAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
17408 AAACTATATCAAGCAAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
17447 AAACTATCTAAAGCGTGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
17486 AAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
17525 AAACTATCTCAAGTGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * **** * * *
17564 AAACCATGT-AA-C-A-CCCCAA-C--CCGTATCCGACCCGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGT-TTCGA--GGG
* * * * * * * *
17599 ATACGAAT-TCGAG-GTG-TCACAT-TGACCT-TTATAC-ACGTG
1 AAAC-TATCTCAAGCGAGATAAAATCT--TCTGTT-T-CGA-GGG
* *** * ** ***
17638 -TACTTGTATAAAATAGTGAGTAAATTAAAA-CTT-TGATAAC-ATAT
1 AAAC---TATCTCA-AGCGAG---A-TAAAATCTTCTG-TTTCGAGGG
*** * * * * * **
17682 AAA-TGA-CT-AATTTACATAAAAGACATTTTCATTAT-TA-CA
1 AAACT-ATCTCAAGCGAGATAAAA-TC-TTCT-GTT-TCGAGGG
* * **** * * *
17721 AAACCA-ATCAGAGC-ATGTATCTTTCTCTTATTATTTAC-A--T
1 AAACTATCTCA-AGCGA-G-AT-AAAATCTT-CTGTTT-CGAGGG
* * * * **
17761 ATAACTAT-TCGAAAC-ATTTATAAAA-CGGTTCATAGCTTAAACAATAG
1 A-AACTATCTC-AAGCGA--GATAAAATC--TTC-T-G-TT--TCGAGGG
** * * * * * *
17808 ATTCT-TTTGAAAAC-ATGCCAACTAAAA-CTT-TATATACTA---
1 AAACTATCT-CAAGCGA-G---A-TAAAATCTTCTGT-TTCGAGGG
** * **** * * *
17847 AATACCTAT-T-ATTC-ACATCTTTTCTGATCTGACCTTTAGTAAGA
1 AA-A-CTATCTCAAGCGAGATAAAATCT--TCTG---TTTCG-AGGG
* ** ** *** * *
17891 AGAACTGACCTGTCTTGCTCCGCAT-TGCTCTTTACTCTTCTCGAAACCTACGTGT
1 A-AACT-A--TCTCAAGC-GAG-ATAAAATC-TT-CTGTT-TCG------A-G-GG
* * * *** ***
17946 AAA-TCA-CTTACACGCTA-AGTCAAAGA-CTT-AGTGAGGCATAT
1 AAACT-ATC-T-CAAGCGAGA-T-AAA-ATCTTCTGTTTCG-AGGG
* * ** * ** * ***
17987 AAAC-ATAT-AAG-GTAAACGGTAACTAATAATC-ATACCTAAAC
1 AAACTATCTCAAGCG---A-GATAA--AATCTTCTGTTTCGAGGG
* ** * * * *
18028 AATTACTACTATCATTTC---ATACCACTCATACT-TTTAC-A-TG
1 AA--ACTA-TCTCA-AGCGAGATA-AAATC-TTCTGTTT-CGAGGG
* * * * * * ** * ** *
18068 TAACAAATGT-ATGCATACATATATGTCATTATCATTC-A--T
1 AAAC-TATCTCAAGC-GAGATA-AAATC-TTCTGTTTCGAGGG
** * ** * ** * *
18107 ATCTCTTATCTCATGTTC-CTATGATCTCTTATGTCCATATC-A--T
1 A-AAC-TATCTCAAG--CGAGATAAAATCTTCTGT---T-TCGAGGG
* * * * * * * * *
18150 ATAACATATAC-CATAACCA-ATTGCACATATAC-ATATC-A-TG
1 A-AAC-TAT-CTCA-AGCGAGA-T-AAAATCTTCTGTTTCGAGGG
* * * * * * * * ***
18190 --TC-ATGT-AACCTATATATATATATATAC--TATC-ATAA
1 AAACTATCTCAAGCGAGATA-A-A-ATCTTCTGTTTCGAGGG
* * * * * * * ***
18225 AACACGTACACACAAGCAATTATATTATCATCTTCATTTCTTTCTTATTTT
1 AA-AC-TA-TCTCAAGCGA-GATA--A-AATCTTC---TGTTTC-GA-GGG
* ** ** *** * * * **
18276 ATCACTA--TC-ATTGATTCCTTTCATCATATGGTTT-TATAAG
1 A-AACTATCTCAAGCGA--GATAAAATCTTCT-GTTTCGA-GGG
** * * ** * ** * * *
18316 TTACCATTTGTA-C-A-ATCAATATCACCCATGAAATTCCACAAGGAAAC
1 AAACTATCTCAAGCGAGAT-AAAATC-TTC-TG---TT--TCGAGG---G
* * * * * * **
18363 AAACATATTATCACATC-ACTTTATTAATAT-TATCTATTT-AATAG
1 AAAC-TA-TCTCA-AGCGA---GA-TAAAATCT-TCTGTTTCGAGGG
** * * * * * * *
18407 -CTCATGATACTCATGTGAGAACTAAAGATATGCGAGTACATAGAGGTTG
1 AAAC-T-AT-CTCAAGCGAG-A-TAAA-ATCTTC-TGT--TTCGAGG--G
** ** ** * * * **
18456 -TGC-A-CT-AATGCTGTCACCACAGC-TCATATAATT-GCACCG
1 AAACTATCTCAA-GC-GAGATAAAATCTTC-TGT--TTCG-AGGG
* * *** **** ** * *
18495 -AAGT-GC-C-A-CGTAGAATTGCA-CCGGAGTGCCG-CGT
1 AAACTATCTCAAGCG-AG-ATAAAATCTTCTGTTTCGAGGG
* * * * * * ** *
18529 AGAATTGCACCGT-AGTGCCATATAATAAT-GTC--CAT--AAGG
1 A-AACT--ATC-TCA-AGCGAGATAA-AATCTTCTGTTTCGAGGG
* * * ** ** *
18568 ACCACATATCATTCCTTAAGACTCATATAAATATAC-TAGGGATC-A-AG
1 A-AAC-TATC--T-C--AAG-C-GAGATAAA-AT-CTTCTGTTTCGAGGG
* ** * * * * * * **
18615 TATGTGTCTC-A-CCAGACTTCACA-C--ATG-TTCCAAAG
1 AAACTATCTCAAGCGAGA--TAAAATCTTCTGTTTCGAGGG
* * * * ** ***
18650 AATACATATATGTCTCGAAG-GACCA-CATATCATTC-CTTAAGAATC
1 AA-AC---TA--TCTC-AAGCGA-GATAAAATC-TTCTGTTTCGAGGG
* * * * * **
18695 ATATACATATACT--AG-G-GATCAAGT-ATGTGTCTC-A-CC
1 A-A-AC-TAT-CTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * ** *
18731 AGACT-TCACACATGTTCCA-A-AGAATACATATATGTCCCGAAGG
1 AAACTATCTCA-A-G--CGAGATAAAAT-C-T-TCTGTTTCGAGGG
* * ** ** * * * *
18774 ACCAC-ATATCATTC--CTTAAGAATCATATACAT-ATGCCAAGG
1 A-AACTATCTCAAGCGAGATAA-AATC-T-T-C-TGTTTCGAGGG
* * * * **
18815 ATCAAGTATGTGTCTC-A-CCAGACT----TCATACATG-TTCCAAAG
1 A--AACTA----TCTCAAGCGAGA-TAAAATC-TTC-TGTTTCGAGGG
* * ** ** ** * ****
18856 AATAC-ATAT-ATGTCCCGA-AGGA-CCACATAG--ACCCTCG
1 AA-ACTATCTCAAG-CGAGATAAAATCTTC-T-GTTTCGAGGG
** ** * * * ** * ***
18893 ACTCT-TGGCATGCCA-ACT-ATA-CCCCTAGCTCTCATGACAC
1 AAACTATCTCAAGCGAGA-TAAAATCTTCT-G-TTTC--GAGGG
* * ** * * * * * *
18933 ATAAC-ATGGTCATTATC--TTTTATATCCTTTTACATATTC-ATGT
1 A-AACTAT-CTCA--AGCGAGATAAAAT-CTTCT--GT-TTCGAGGG
* * * ** * * ***
18976 AACCATATCAT-ATATTC-ATATAAGCTCAT-GGTTTC-ATTC
1 AAAC-TATC-TCA-A-GCGAGATAAAATCTTCTGTTTCGAGGG
* * * * ** * ** **
19015 ACATA-TATATGTAATC-ACGTATTTCAGGTCAAT-TGTCACATGAGTTC
1 A-A-ACTATCT-CAAGCGA-G-A--TAAAATC-TTCTGTTTC--GAG-GG
* * * * ** * * * ***
19062 ATATTCATAT-AAGCATAGGAT-TCACCCTCATGTATC-ACAT
1 AAACT-ATCTCAAGC-GA-GATAAAATCTTC-TGTTTCGAGGG
* * ** * * *
19102 ATACTTTCTCTTTCATATG-GCTCATAACATTTCTCATGTGTTC-A--T
1 AAAC--TATC--TCA-A-GCG-AGATAAAATCT-TC-TGT-TTCGAGGG
* * * * * * ***
19147 ATAAC-ATGTAAATC-A-TTGACATCTTATCATGTTATC-ACAT
1 A-AACTATCTCAAGCGAGATAAAATC-T-TC-TGTT-TCGAGGG
** * * * * * ***
19187 AAACATATCATCTTACA-ATACATACAAAAC-AC---ATCAATAC
1 AAAC-TATC-TC--A-AGCGAGATA-AAATCTTCTGTTTCGAGGG
* * ** * ***
19227 ATA-TAT-TC-A-C-ATATACGTATCATTTCAT-TATC--CTT
1 AAACTATCTCAAGCGAGATA-AAATC--TTC-TGTTTCGAGGG
* * * * * * * * *
19262 ATTATTATTCTTATCATC-ACCAT-TAATCCTTTTTTTTC----T
1 A-AACTA-TCTCA--AGCGA-GATAAAAT-CTTCTGTTTCGAGGG
* * * * * * ** * *
19301 TACCATAT-TCATATC-A-ATAACA-CATAT-ACTC-ATGC
1 AAAC-TATCTCA-AGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * **
19336 ACACATATAAATCATAAC-AAAT-ACATACTTCTATGAATTC-ATGTTTT
1 AAAC-TAT--CTCA-AGCGAGATAAAAT-CTTC--TG-TTTCGA-G--GG
** * ** * ****
19383 TCACTAT-TGGAA-ATAGACTTATCACAAGTCTTAT-TTTCCCTTG
1 AAACTATCT-CAAGCGAGA--TA--A-AA-TCTTCTGTTTCGAGGG
* * * * ** * *** **
19426 AACCTCATAT--A-CTAGAGAAGGTGCACTCACCTT--AGCT
1 AAACT-ATCTCAAGCGAGATAAAAT-C-TTCTGTTTCGAGGG
*** * ** * ** * *
19463 TTGCT-T-TGATTCGA-TTCTAATCCTTCAG-TT-GATTCGG
1 AAACTATCTCAAGCGAGATAAAAT-CTTCTGTTTCGA--GGG
* * *** * * **** * * * *
19500 -AACGGGATCACGTTCTATATCTTTTC-TCTTGGCTTCCACGT
1 AAAC--TATCTCAAGCGAGATAAAATCTTC-T-GTTTCGAGGG
** **** ** * * * *
19541 AAAGAAGAAGAAGAAAGGAGAAGAGCACTCTG----GA--G
1 AAACTATCTCAAGCGA-GATAAAATC-TTCTGTTTCGAGGG
* * * * * * *****
19576 AATTCACTCCCTTTCCA-CGTGTATATAA-CTCCAT-TTT-TTTTT
1 AA---ACT--ATCTCAAGCGAG-ATAAAATCTTC-TGTTTCGAGGG
* * ** ** * ** **
19618 AAA-TGATC-AAATGACCA-ATTTACCCTGTAT-TTCCTTTA-AT
1 AAACT-ATCTCAA-G-CGAGATAAAATCT-TCTGTT--TCGAGGG
** * *** * * * ** * **
19658 AATTACTAAAT-AACCTTCATCATATATATCCAATAATC-ATTG
1 AA--ACTATCTCAAGCGAGAT-A-AAATCTTCTGT-TTCGAGGG
* ** *** ** * * *** *
19700 -AACTATTTCATTCTTCTACTTTAGTCATCAAATTC---TG
1 AAACTATCTCAAGC-GAGA-TAAAATCTTCTGTTTCGAGGG
** * * * * **
19737 AAACT-T-TACAAATTG-G-TCACTAA-C-CCATAATTTGGGATGTTAC
1 AAACTATCT-C-AAGCGAGAT-A-AAATCTTC-T-GTTT-CGA-G--GG
* * *
19780 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
19819 AAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* *
19858 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
19897 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
19936 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * **
19975 AAAAGAT-TCAAGCGAGATAAAATCTTCTTTTTCAACAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
20013 AAACTATCTAAATCGAGACAAAATATTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
20052 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
20091 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
20130 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
20168 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
20207 AAACTATCTCAAGCGAGAAAAAAAT-TTCTATTTCGAGGG
1 AAACTATCTCAAGCGAG-ATAAAATCTTCTGTTTCGAGGG
* *** *
20246 -AACAAATCTCAAAAAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
20285 AAACTATCTCAAGCGAGATAAAATATT-TCGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGGG
* * * * *
20324 AAACTATATCAAGCGAGACAAAATCCTTTTTTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAAT-CTTCTGTTTCGAGGG
* * * * *
20364 AAAATATATCAAGCAAGAAAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
20403 AAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
20442 AAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 -AA--A---C-T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * **
20492 AAAAGAT-TCAAACGAGATAAAATCTTCTTTTTCGACAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
20530 AAACTATCTAAAGCGAGACAAAATATTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
20569 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
20608 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
20647 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
20685 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
20724 AAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
20763 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
20802 AAACTATCTCAAGCGAGATAAAA--TTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
20839 AAATTATATCAAGCGAGACAAAATCTTTTTTTTTCGATGG
1 AAACTATCTCAAGCGAGATAAAATC-TTCTGTTTCGAGGG
* * * *
20879 AAACTATATCAAGCAAGAAAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
20918 AAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
20957 AAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 -AA--A---C-T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * **
21007 AAAAGAT-TCAAGCGAGATAAAATCTTCTTTTTCGACAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
21045 AAACTATCTAAAGCGAGACAAAATATTTTGTTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
21084 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
21123 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
21162 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
21200 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
21239 AAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
21278 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
21317 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
21356 AAATTATATCAATCGAGACAAAATCTTTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATC--TTCTGTTTCGAGGG
* * * * * *
21397 AAACTATATCAATCAAGAAAAAATCTTATGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
21436 AAACTATCTAAAGCGTGAAAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* **
21475 AAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCAATTTCGAGGG
1 -AA--A---C-T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * **
21525 AAAAGAT-TCAAGCGAGATAAAATCTTCTTTTTCGACAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
21563 AAACTATCTAAAGCGAGA-CAAATATT-TGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
21600 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
21639 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
21678 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
21716 AAACTAACTCAAGTGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
21755 AAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
21794 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGTG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
21833 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
21872 AAACTATATCAAGCGAGACAAAATCTTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATC-TTCTGTTTCGAGGG
* * *
21912 AAACTATATCAAGCAAGA-AAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
21950 AAACTATCTAAAGCGTGAAAAAATCTCCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
21989 AAACCATCTCATGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
22028 AAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
22067 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
22106 AAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* *
22145 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
22184 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
22223 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * * *
22262 AAAAGAT-TCAAGAGAGATAAAAACTTATTTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
22300 AAACTATCTCAAGCGAGACAAAATCTTTTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
22339 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
22378 AAACTATCTCAAGCGAAACAAAATCTTCTATTTAGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
22417 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
22455 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
22494 AAACTATCTCAAGCGAGAAAAAAAT-TTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAG-ATAAAATCTTCTGTTTCGAGGG
* * *
22533 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
22572 AAACTATCTCAAGCGAGACAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
22611 AAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
22649 AAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
22688 AAACTATCTAAAGCGTGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
22727 AAACCATCTCATGCGAGATAAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
22766 AAACTATCTCAAGCGAGAAAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
22805 AAACCATATCAAGCGACATAAAATATTATGTTTCTAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
22844 AAACCATCTCAAGCAAGATAAACTCTTCTGTTTC-ATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * *
22883 AAACTATCTAAAGCGAGATAAAATCTTATGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
22922 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
22961 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
23000 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
23038 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
23077 AAACTATCTTAAGCGAGAAAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
23116 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
23155 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
23193 AAACTATCTCAAGCGAGATAAAATCTTCTGTTT-GAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
23231 AAACTATCTCAAGCGAGA-AAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
23269 -AACATATCTCAAACAAGAGAAAATCTTCTATTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
23308 AAACTATCTCAAGCGAGACAAAATATTTTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
23347 AAACTATATCAAGCGAGACAAAATCTAT-TTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGG
* *
23386 AAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
23425 AAACTAACTAAAGCGTGACAAAATCTTATGTTTTGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
23464 AAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
23503 AAAGTATCTCAAGCGAGA-AAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
23541 AAACTATCTCAAGCGAGACAAAATATTCTATTTAGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
23580 AAACTATCTCATGTGAGACAAAATCTTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * * *
23619 AAACTATCTCAAGAGAGATAAAATCTTCAGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
23658 AAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * **** *
23697 AAACTATCTCAAGCGAGGCTAATTCTCAAACTATCTCAAGCGAGGC
1 AAACTATCTCAAGCGA-GATAA-----AATCT-TCTGTTTCGAGGG
** * **
23743 AAA--ATCT-ACAGTTTCGAGGGAAACTATC-TCAAG--T-GAGAC
1 AAACTATCTCA-AG---CGAGATAAA--ATCTTC-TGTTTCGAGGG
* ** **** **
23782 AAA--ATCTTCTATTTG-GAG-GGAAA-CTATCTCAAGCGAGAC
1 AAACTATC-TC-A--AGCGAGATAAAATCT-TCTGTTTCGAGGG
** * * **** **
23821 AAA--ATCTTCTATTTCAAGA-GAAA-CTATCTCAAGCGAGAT
1 AAACTATC-TC-A-AGCGAGATAAAATCT-TCTGTTTCGAGGG
* ** ** **** **
23860 AAAATAT-TCTATTTC-AG-GGAAA-CTATCTCAAGCGAGATA
1 AAACTATCTC-A-AGCGAGATAAAATCT-TCTGTTTCGAG-GG
**** ** ** **
23899 AAATCT-TCTGTTTCGA-AGGAAA-CTATCT-TAAGCGAGAA
1 AAA-CTATCTCAAGCGAGATAAAATCT-TCTGT-TTCGAGGG
* * **** ** * ** * **
23937 AAAATATTTTGTTTCGAGGGAAACTATC-TCAAGACAT-AATCTG
1 AAACTA-TCTCAAGCGAGATAAA--ATCTTC-TG-TTTCGA-GGG
* *
23980 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
24019 AAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
24058 AAACTATTTCAAGCGAGAAAAAATATAT-TGCTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGG
* * * *
24097 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
24136 AAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
24175 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
24214 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
24253 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
24292 AAAAGAT-TCAAGCGAGATAAAATCTTCTATTTCGATGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
24330 AATCTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
24369 AAACCATCTCATGCGAGATAAAATCTTCTGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
24408 AAACCATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
24447 AAACTCTCTCAAGCGAGATAAAATCTTTTATTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
24486 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
24525 AAACTATCTCAAGAGAGATAAAATCTTATGTTTCTAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
24564 AAAAGAT-TCAAGCGAAATAAAATCTTCTGTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
24602 AAACTATAC-CAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTAT-CTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
24641 AAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* *
24680 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
24719 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
24758 AAACTATCTCAAGAGAGATAAAATCTTCTGTTCCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
24797 AAAAGAT-TCAAGCGAGATAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
24835 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
24874 AAACTATCTTAAGCGAGACAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
24913 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
24952 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
24990 AAACTATCTCAAGCGAGATAAAATCATCTGTTTTGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
25029 AAACTATCTCAAGCGAGA-AGAATCTTCTATTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
25067 -AACATAGCTCAAACAAGAGAAAATCTTCTGTTTCGATGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
25106 AAACTATCTCAAGTGAGACAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
25145 AAACTATATCAAGCGAGACAAAATCTT-TTTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
25183 AAACTATCTCAAGCGAGAAAAAATCTTCTATTTCGAGGC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
25222 AAACTATCTAAAGTGTGACAAAATCTTCTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
25261 AAACTATCTCATGCGAGATAAAAT-TTTTAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGGG
*
25300 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
25339 AAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
25378 AAACTATCTCAAGTGAGA-AAAACCTTATATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * * ** *
25416 AAACTATCTTAAGAGAGTTAAAAGATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
25454 AAACTATATCAAGCGAGATAAAATCATCAGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
25493 AAACTCTCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
25532 AAACTATCTCAAGCGAGGCT-AATTCTCAAACTATCTCAAGCGAGG
1 AAACTATCTCAAGCGA-GATAAAATCT---TCTGTTTC--GAG-GG
* ** * **
25577 TAAC-ATCT-ACAGTTTCGAGGGAAACTATC-TCAAG--T-GAGAC
1 AAACTATCTCA-AG---CGAGATAAA--ATCTTC-TGTTTCGAGGG
* ** **** **
25617 AAA--ATCTTCTATTTG-GAG-GGAAA-CTATCTCAAGCGAGACA
1 AAACTATC-TC-A--AGCGAGATAAAATCT-TCTGTTTCGAG-GG
* * * **
25657 AAATCATATTTTCAA--GAGA-AACTATC-TCAAG---CGAGAT
1 AAA-C-TA-TCTCAAGCGAGATAA-AATCTTC-TGTTTCGAGGG
* ** ** **** **
25694 AAAATAT-TCTATTTC-AG-GGAAA-CTATCTCAAGCGAGATA
1 AAACTATCTC-A-AGCGAGATAAAATCT-TCTGTTTCGAG-GG
**** ** **
25733 AAATCT-TCTGTTTCGA-AGGAAA-CTATCT-TAAGCGA--G
1 AAA-CTATCTCAAGCGAGATAAAATCT-TCTGT-TTCGAGGG
** *** ** **** **
25769 AAAAAATCTTTTGTTTCGAG-GGAAA-CTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCAAG---CGAGATAAAATCT-TCTGTTTCGAG--------GG
*
25818 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
25857 AAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
25896 AAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
25935 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
25974 AAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* *
26013 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
26052 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
26091 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
26130 AAAAGAT-TCAAGCGAGATAAAATCTTATTTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
26168 AAACTATCTCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26207 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
26246 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26285 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* ** * *
26323 AAACTATCTCAAGTGACTTAAAATATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
26361 AAACTATCTGAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
26400 AAACTATATTAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
26439 AAACTATCTCAAGCGTGACATAA---TC----TC-----
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
26466 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
26505 AAACTATCTCAACCGAGACAAAATCTTATGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26544 AAACTATTTCAGGCGAGAAAAAATATT-TTTCTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGT-TTCGAGGG
* * * *
26583 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
26622 AAACAATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
26661 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
26700 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
26739 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** *
26778 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
26816 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26855 AAACTATCTTAAGCGAGACAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
26894 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26933 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
26971 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
27010 AAACTATCTCAAGTGAGAAAAAATATTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
27049 -AACATATCTCAAACAAGAGAAAATCTTTTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
27088 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
27127 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
27166 AAACTATATCAAGCAAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
27205 AAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
27244 AAACCATCTCATGCGATATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
27283 AAACTATCTCAAGTGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
27322 AAAC
1 AAAC
27326 CATGAAACAC
Statistics
Matches: 17655, Mismatches: 3557, Indels: 2634
0.74 0.15 0.11
Matches are distributed among these distances:
27 43 0.00
30 8 0.00
31 22 0.00
32 41 0.00
33 71 0.00
34 137 0.01
35 197 0.01
36 361 0.02
37 540 0.03
38 2837 0.16
39 11719 0.66
40 432 0.02
41 200 0.01
42 133 0.01
43 151 0.01
44 118 0.01
45 90 0.01
46 130 0.01
47 112 0.01
48 46 0.00
49 59 0.00
50 109 0.01
51 43 0.00
52 7 0.00
53 16 0.00
54 10 0.00
55 14 0.00
56 9 0.00
ACGTcount: A:0.37, C:0.17, G:0.17, T:0.29
Consensus pattern (39 bp):
AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
Found at i:6301 original size:32 final size:33
Alignment explanation
Indices: 6238--6348 Score: 102
Period size: 32 Copynumber: 3.3 Consensus size: 33
6228 GCGAAAAATC
6238 TTCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAA
1 TTCTATTTC--AAGAAACTA--TCAAGCGAGATAAAA
*
6275 TTCTATTTCAAGAAACT-TCAAGCGAGATAAATC
1 TTCTATTTCAAGAAACTATCAAGCGAGATAAA-A
* * * *
6308 TTCTGTTTGAAGGAACTATCAAGTGA-A-AAAA
1 TTCTATTTCAAGAAACTATCAAGCGAGATAAAA
6339 CTTCTATTTC
1 -TTCTATTTC
6349 GAGCGAACTA
Statistics
Matches: 63, Mismatches: 8, Indels: 11
0.77 0.10 0.13
Matches are distributed among these distances:
32 24 0.38
33 15 0.24
34 7 0.11
35 8 0.13
37 9 0.14
ACGTcount: A:0.39, C:0.16, G:0.14, T:0.32
Consensus pattern (33 bp):
TTCTATTTCAAGAAACTATCAAGCGAGATAAAA
Found at i:7085 original size:136 final size:136
Alignment explanation
Indices: 6932--7196 Score: 353
Period size: 136 Copynumber: 1.9 Consensus size: 136
6922 ATTTCAAGAG
* * *
6932 AAACTATCTCAAGCGAGATAAA-TTC-TATTC-AGGGAAACTATCTTAAGCGAGATAAAATCTTC
1 AAACTATCTCAAGCGAGACAAACTTCGT-TTCGAGGGAAACTAT-TCAA-CGAGA-AAAATCTTA
* * * *
6994 TGTTTCGAAGGAAACTATCTT-AAGTGAGAAAAAATCTTTTGTTTCGA-GGAAACTATCTC-AGC
62 TG-TTCGAAGGAAACTAT-TTCAAGCGAGAAAAAATCTTTTGCTTCAAGGGAAACCATCTCAAGC
7056 GAGACATAATTC
125 GAGACATAATTC
*
7068 AAACTATCTCAAGCGAGACAAATCTTCGTTTCGAGGGAAACTATTCAACGAGACAAATCTTATGT
1 AAACTATCTCAAGCGAGACAAA-CTTCGTTTCGAGGGAAACTATTCAACGAGAAAAATCTTATGT
7133 TCGAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCAAGGGAAACCATCTCAAGCGAGA
65 TCGAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCAAGGGAAACCATCTCAAGCGAGA
7197 TAAAATATTT
Statistics
Matches: 114, Mismatches: 8, Indels: 13
0.84 0.06 0.10
Matches are distributed among these distances:
134 2 0.02
135 38 0.33
136 41 0.36
137 12 0.11
138 9 0.08
139 12 0.11
ACGTcount: A:0.38, C:0.18, G:0.18, T:0.27
Consensus pattern (136 bp):
AAACTATCTCAAGCGAGACAAACTTCGTTTCGAGGGAAACTATTCAACGAGAAAAATCTTATGTT
CGAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCAAGGGAAACCATCTCAAGCGAGACA
TAATTC
Found at i:7103 original size:61 final size:63
Alignment explanation
Indices: 7005--7122 Score: 161
Period size: 61 Copynumber: 1.9 Consensus size: 63
6995 GTTTCGAAGG
* * * *
7005 AAACTATCTTAAGTGAGAAAAAATCTTTTGTTTCGA-GGAAACTATCTCAGCGAGACATAATTC
1 AAACTATCTCAAGCGAGAAAAAATCTTTCGTTTCGAGGGAAACTAT-TCAACGAGACATAATTC
*
7068 AAACTATCTCAAGCGAG-ACAAATC-TTCGTTTCGAGGGAAACTATTCAACGAGACA
1 AAACTATCTCAAGCGAGAAAAAATCTTTCGTTTCGAGGGAAACTATTCAACGAGACA
7123 AATCTTATGT
Statistics
Matches: 49, Mismatches: 5, Indels: 4
0.84 0.09 0.07
Matches are distributed among these distances:
61 19 0.39
62 15 0.31
63 15 0.31
ACGTcount: A:0.38, C:0.19, G:0.17, T:0.26
Consensus pattern (63 bp):
AAACTATCTCAAGCGAGAAAAAATCTTTCGTTTCGAGGGAAACTATTCAACGAGACATAATTC
Found at i:8791 original size:27 final size:27
Alignment explanation
Indices: 8753--8805 Score: 88
Period size: 27 Copynumber: 2.0 Consensus size: 27
8743 GTTTCGAGGG
*
8753 AAACTATCTCAAGCAAGACATAATCTC
1 AAACTATCTCAAGCAAGACAAAATCTC
*
8780 AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCAAGACAAAATCT
8806 TCTGTTTCGA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
27 24 1.00
ACGTcount: A:0.45, C:0.25, G:0.09, T:0.21
Consensus pattern (27 bp):
AAACTATCTCAAGCAAGACAAAATCTC
Found at i:8820 original size:66 final size:66
Alignment explanation
Indices: 8714--8844 Score: 199
Period size: 66 Copynumber: 2.0 Consensus size: 66
8704 GTTTCGAAGG
* * * *
8714 AAACTAACTTAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCAAGACATAATCT
1 AAACTAACTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCAAGACAAAATCT
8779 C
66 C
* * *
8780 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTAACTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCAAGACAAAATCT
8845 TATGTTTCGA
Statistics
Matches: 58, Mismatches: 7, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
66 58 1.00
ACGTcount: A:0.40, C:0.21, G:0.15, T:0.24
Consensus pattern (66 bp):
AAACTAACTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCAAGACAAAATCT
C
Found at i:9789 original size:27 final size:27
Alignment explanation
Indices: 9751--9803 Score: 97
Period size: 27 Copynumber: 2.0 Consensus size: 27
9741 GTTTCGAGGG
*
9751 AAACTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCAAGCGAGACAAAATCTC
9778 AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCT
9804 TCTGTTTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.43, C:0.25, G:0.11, T:0.21
Consensus pattern (27 bp):
AAACTATCTCAAGCGAGACAAAATCTC
Found at i:9818 original size:66 final size:66
Alignment explanation
Indices: 9712--9842 Score: 208
Period size: 66 Copynumber: 2.0 Consensus size: 66
9702 GTTTCGAGGG
* * * * *
9712 AAACTATCTTAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAATCT
1 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCAAGGGAAACTATCTCAACCGAGACAAAATCT
9777 C
66 C
*
9778 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCAAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCAAGGGAAACTATCTCAACCGAGACAAAATCT
9843 TATGTTTCGA
Statistics
Matches: 59, Mismatches: 6, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
66 59 1.00
ACGTcount: A:0.39, C:0.21, G:0.15, T:0.25
Consensus pattern (66 bp):
AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCAAGGGAAACTATCTCAACCGAGACAAAATCT
C
Found at i:9989 original size:117 final size:117
Alignment explanation
Indices: 9778--35453 Score: 8932
Period size: 117 Copynumber: 219.8 Consensus size: 117
9768 ACATAATCTC
* * * *
9778 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCAAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
9843 TATGTTTCGAGGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
9895 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * **
9960 TTTGTTTCGAGGGAAACTCTCTCAAGCGAGATGAAATCTTTTGTTTCGAGCT
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
10012 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
10077 TATGTTTCGAGGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
10129 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
10194 TTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
10246 AAACTCTCTCAAGCAAGATAAAATCTTCTATTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* ** * *
10311 TCTGTTTCGAGCGAAAAGAT-TCAAGCGAGATAAAATCTTTTGTTTCGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * **
10362 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGAAAACCATCTCTCGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
10427 TATGTTTCGAGGGAAACAATCTCAAGCGAGAAAAAATCTTATGTTTTGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
10479 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
10544 TCTGTTTC-ATGGGAAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
10596 AAACTCTATCAAGCGAGATAAAATCTTCTGTTTCGAGGG-AACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
10660 TCTGTTTCAAGGGTAAA-GAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGG
66 TCTGTTTCGAGGG-AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
10711 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAGAATCTATCTTAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * **
10776 TCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
10828 AAACTATCTCAAGCGAGAT-AAATATTCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
10891 TCTGTTTTGAAGGAAACTATCTCAAGCGAGAAAAAATCTTCTATTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
10943 -AACATATCTCAAACAAGAGAAAATCTTCTCTTTCGAGGGAAACTATCTCAAGCGAGATAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * * *
11007 TTCTGTTTTGAGGGAAATTATATCAAGCGAGACAAAATCTTTTTTTTCTAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
11060 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGTGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
11125 TCTGTTTCGAGAGAAACTATCT-ATGCGAGATAAAATTTTCAGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
11176 AAACTATCTCAAGCGAGACAAAATCTTTTGTTTCGAGGGAGACTATCTCAAGCGAGACAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*** * * * * *
11241 TAAATTTTGAGGGAAACTATATCAAGTGAGACAAAATCTTCTATTTC-AGGAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG-G
* * * * * * * * * **
11293 AAACTATCTTAAGCAAGTTAAAAGCTTATATTTCTG-GAGAAACTATCTTAAGCGAGTTAAAAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
11357 TTCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
11409 AAACTATCTCAAGCGAGA-AAAATCTTTTGTTTCGAGGGAAACTATTTCAAGCGAGGAT--AA--
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA-GATAAAATC
** * * *
11469 TTC----TC-----AAACTATCTCAAGCGAGGCAAAATCTACAGTTTCTAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
11513 AAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
11578 TCTATTTCAAGAGAAACTATCTCAAGCGAGTTAAAATATTCTATTTC-AGAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
11629 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
11694 TTTATTTCGAGGGAAACTATCTCAAGCGAGACATAA---TC----TC-----
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
11734 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
11799 TATGTTTCGAGGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
11851 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
11916 TTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGT
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * ** * *
11968 AAACTCTCTCAAGCAAGATAAAATCTTCTGTTTCGAGGGAAACTAAATCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
12033 TATGTTTCGAGGGAAACTATTTCAAGCGAGAAAAAATCCTT-TGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAAT-CTTCTGTTTCGAGGG
* * * * * *
12085 ACACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
12150 TTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
12202 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** *
12267 TATGTTTCGAGCGAAAAGAT-TCAAGCGAGATAAAATCTT-TGTTTCGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * ** *
12317 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGAAAACCATCTCTCGTGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
12382 TCTGTTTCGAGGGAAACAATCTCAAGCGAGA-AAAATCTTATGTTTTGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
12433 AAACCATCTTAAGCGAGATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
12498 TCTGTTTC-ATGGGAAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
12550 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** * * *
12615 TCTATTTCAAGGGAAAAGAT-TTAAGCGAGATAAAATCTTTTGTTTCGAGAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * * *
12666 AATCTATCTTAAGCGAAACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* ** * * * *
12731 TCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* ** * *
12782 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAATGAAACTATCTTAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
12847 TCTATTTTGAGGG-AACATATCTCAAACGAG-TGAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAAC-TATCTCAAGCGAGAT-AAAATCTTCTGTTTCGAGGG
* * * * * *
12899 AAACTTTCTCAAGCGAGACAAAATATTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
12964 TTTTTTTCGAGGGAAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * *
13016 AAACTATCTAAAGCGTGACAAAATCTTTTGTTTCGAGAGAAGCTATCT-ATGCGAGATAAAATTT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*
13080 TCAT-TTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
66 TC-TGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * *
13132 AAACTATCTCAAGCGAGACAAAATATTATATTTGGAGGGAAACTATATCAAGTGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * ** * * *
13197 TCTATTTCTG-GAGAAACTATCTTAAGCGAGTTAAAAGATTCTATTTCTAGAG
66 TCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * ** *
13249 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
13313 TCAGTTTCAAAGGAAACTATCTCAAGCGAGA-AAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
13364 AAACTATTTCAAGCGAGGCT--AA-----TG-CTC-----AAACTATCTCAAGCGAGGCAAAATC
1 AAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * ** * * *
13416 TACAGTTTCTAGGGAAACTATCTCAAATGAGACAAAATCTTCTATTTGGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * ** * * * *
13469 AAACTATCTCAAGCGAGACAAAATCATCTATTTAAAGAGAAACAATCTCAAGCGAGTTAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
13534 TCTATTTC-AGAGAAACTATCTCAAGCGAGATAAAATCTTTTGTTTCGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
13585 AAACTACCTTAAGCGAGAAAAAATCTTTTGTTTGGAGGGAAACTATCTCAA-CGAGACATAA---
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*
13646 TC----TC-----AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
13689 AAACTATCTCAACCGAGACAAAATCTTTTGTTTCGAGGAAAACCATCTCACGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
13754 TCTGTTTCGAGGGAAACAATCTCAAGCGAGAAAAAATCTTATGTTTCGAGGA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * * * *
13806 AAACCGTCTCAAGCGAGATAAAATATTATGTTTTGAGGGAAACCATCTCACGCGAGATAAACTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*
13871 TCTGTTTC-ATGGGAAACTATCTAAAGAC-AGATAAAATCTT-TAGTTTCGAGGG
66 TCTGTTTCGA-GGGAAACTATCTCAAG-CGAGATAAAATCTTCT-GTTTCGAGGG
* * * *
13923 AAACTCTCTCAAGCAAGATAAAATCTTCTATTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* ** * *
13988 TCTGTTTTGAGGGAAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * *
14039 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAGAATCTATCTTAAGTGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * ***
14104 TCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATATCGAAAT
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
14156 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
14220 TCTGTTTTGAAGGAAACTATCTCAAGCGAGA-AAAATATTCTATTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
14271 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * *
14335 TTCTGTTTTGAGGGAAACTATATCAAGCAAGACAAAATCTTTTTTTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC-TTCTGTTTCGAGGG
* * * * *
14389 AAACTATCTGAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGTGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
14454 TCTGTTTCGAGAGAAACTATCT-ATGCGAGATAAAATTTTCAGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
14505 AAACTATCTCAAGCGAGACAAAATCTTCTATTTCGAGGGAAACTATCTCAAGCGAAATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * *
14570 TATATTTGGAGGGAAACTATATCAAGTGAGACAAAATCTTCTATTTCTG-GAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** * * * * * **
14622 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTCTG-GAGAAACTATCTTAAGTGAGTTAAAAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
14686 TTCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
14738 AAACTATCTCAAGCGAGA-AAAATCTTTTGTTTCGAGGGAAACTATTTCAAGCGAGGCT--AA--
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA-GATAAAATC
** * *
14798 TTC----TC-----AAACTATCTCAAGCGAGGCAAAAT-TTACAGTTTCTAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTT-CTGTTTCGAGGG
* * * * * *
14842 AAACTATCTTAAGTGAGACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
14907 TCTATTTCAAGAGAAACTACCTCAAGCGAGTTAAAATATTCTATTTC-AGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
14958 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
15023 TTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAA---TC----TC-----
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
15063 AAACTATCTCAAGCGAGACAAAATCTTCAGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
15128 TATGTTTCGAGGGAAACTATTTCAAGCGAGA-AAATATCTTTTGCTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAA-ATCTTCTGTTTCGAGGG
* * * *
15180 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGGAAAGC-ATCTCAAGCGAGATAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAA-CTATCTCAAGCGAGATAAAATC
* * * *
15244 TTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGT
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
15297 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
15362 TATGTTTCGAGGGAAACTATTTCAAGCGAGAAAAAATCTTTTGTTTTGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
15414 AAACTATCTCAAGCGAGAAAAAATCTTATGTTTTGAGGGAAACCATCTCAAGCGATATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
15479 TATGTTTCGAGGG-AACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * * *
15530 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGAAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
15595 TCTGTTTTGAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCTAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * *
15647 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGGAAAATATCTTAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * * * * *
15711 TTTGTTTCGAGAGAATCTATCTTAAGCGAAACAAAGTCTTCTATTTGGACGA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * ** *
15763 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
15828 TCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
15879 AAACTATCTAAAGCGAGAAAAAATCTTCTATTTCGAGGG-AACATATCTCAAACAAGAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * *
15943 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATATTCTGTTTTGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
15996 AAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGGAAACTATCTCAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * **
16060 TCTGTTTCGAGGGAAACTATCTAAAGCGTGACAAAATCTTCTGTTTCGAGAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
16112 AAACTATCT-ATGCGAGATAAAATTTTCAGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
16176 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * * **
16228 ACACTATATCAAGTGAGACAAAATCTTCTATTTCTG-GAGAAACTATCTTAAGCGAGTTAAAAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * ** *
16292 TTCTATTTCTG-GAGAACCTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGG
65 TTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
16344 AAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
16409 TTTGTTTCGAGGGAAACTATTTCAAGCGAGGCT--AA--TTC----TC-----
66 TCTGTTTCGAGGGAAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGG
** * * * * *
16449 AAACTATCTCAAGCGAGGCAAAATCTACAGTTTCTAGGGAAACTATCTCAAGTGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
16514 TCTATTTGGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTATTTCAAGAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
16566 AAACTATCTCAAGCGAGTTAAAATATTCTATTTC-AGGGAAACTATCTCAAGTGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
16630 TCTGTTTCGAAGTAAACTATATTAAGCGAGAAAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
16682 AAACTATCTCAAGAGAGACATAA---TC---TT------AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
16735 TCTGTTTCGAGGGAAACTATCTCAACCGAGAAAAAATCTTATGTTTCAAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
16787 AAACTATTTCAGGCGAGAAAAAATCTTTTGCTTCGAGGGAAACCATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
16852 TATGTTTCAAGGGAAACAATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
16904 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGTAAACTCTATCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
16969 TCTGTTTCGAGGGAAACTATCTTAAGAGAGATAAAATCTTCTGTTTTGAGCG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * * *
17021 AAAAGAT-TCAAGCGAAATAAAATCTTATGTTTCGACGGAAACTATCCCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
17085 TTTGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCTTCTATTTGGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * ** *
17137 AAACTATCTCAAGCGAAACAAAATGTTCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
17202 TATATTTC-AAGAAAACTATCTCAAGCGAGAGAAAATCTTCTGTTTCGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
17253 AAACTATCTCTAGTGAGAAAAAATATTCTGTTTCGAGGG-AACATATCTCAAACAAGAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * *
17317 TTTTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
17370 AAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGGAAACTATATCAAGCAAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
17434 TTTGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
17486 AAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGTGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * **** * * *
17551 TATGTTTCGAGGGAAACCATGT-AA-C-A-CCCCAA-C--CCGTATCCGACCCGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGT-TTCGA--GGG
* * * * * * * * * *** *
17599 ATACGAAT-TCGAG-GTG-TCACAT-TGACCT-TTATAC-ACGTG-TACTTGTATAAAATAGTGA
1 AAAC-TATCTCAAGCGAGATAAAATCT--TCTGTT-T-CGA-GGGAAAC---TATCTCA-AGCGA
** *** *** * * * *
17657 GTAAATTAAAA-CTT-TGATAAC-ATATAAA-TGA-CT-AATTTACATAAAAGACATTTTCATTA
56 G---A-TAAAATCTTCTG-TTTCGAGGGAAACT-ATCTCAAGCGAGATAAAA-TC-TTCT-GTT-
* **
17716 T-TA-CA
111 TCGAGGG
* * **** * * * *
17721 AAACCA-ATCAGAGC-ATGTATCTTTCTCTTATTATTTAC-A--TATAACTAT-TCGAAAC-ATT
1 AAACTATCTCA-AGCGA-G-AT-AAAATCTT-CTGTTT-CGAGGGA-AACTATCTC-AAGCGA--
* * * ** ** * * *
17779 TATAAAA-CGGTTCATAGCTTAAACAATAGATTCT-TTTGAAAAC-ATGCCAACTAAAA-CTT-T
56 GATAAAATC--TTC-T-G-TT--TCGAGGGAAACTATCT-CAAGCGA-G---A-TAAAATCTTCT
* * *
17839 ATATACTA---
108 GT-TTCGAGGG
** * **** * * * * **
17847 AATACCTAT-T-ATTC-ACATCTTTTCTGATCTGACCTTTAGTAAGAAGAACTGACCTGTCTTGC
1 AA-A-CTATCTCAAGCGAGATAAAATCT--TCTG---TTTCG-AGGGA-AACT-A--TCTCAAGC
** *** * * * * * * * * * ***
17909 TCCGCAT-TGCTCTTTACTCTTCTCGA---AACCTACGTGTAAATC-A-CTTACA-C-GCTAAGT
54 -GAG-ATAAAATC-TT-CTGTT-TCGAGGGAAACTA--TCTCAAGCGAGATAAAATCTTCTGTTT
17966 C-A---
112 CGAGGG
* * * * * ** * ** * * * * * * *
17968 AAGACT-TAGTGAGGC-ATATAAACAT-ATAAG-GTAAACGGTAACTAATAATCATACCTAAACA
1 AA-ACTAT-CTCAAGCGAGATAAA-ATCTTCTGTTTCGAGGGAAACT-AT-CTCA-AGCGAGATA
* * * * ** * * * *
18029 ATTACTACTATC-ATTTC-A--TACCACTCATACTTTTA-C-ATG-TAACAAAT-GTATGCATAC
60 A--AAT-CT-TCTGTTTCGAGGGA-AACT-AT-C-TCAAGCGA-GAT-A-AAATCTTCTG-TTTC
*
18086 -A--T
113 GAGGG
** * ** * *** * * * ** * *
18088 ATATGTCATTATCATTC-ATATCTCTTATC-TCATGTTCCTA-TGATCTCTTATGTCCATATC-A
1 A-AACT-A-TCTCAAGCGAGA--TAAAATCTTC-TGTTTCGAGGGA-AAC-TATCT-CA-AGCGA
* * * * ** ** * ** * * * ** * * * *
18149 TATAACATATACCATAACCAATTG-CACATAT-ACATATC-ATGTCATGTAACCTATATATAT--
56 GATAAAATCTTCTGT-TTCGAGGGAAAC-TATCTCA-AGCGA-G--ATAAAATCT-TCTGTTTCG
***
18209 ATAT
114 AGGG
* * * * * * * **** * *** **
18213 ATACTATCATAAAAC-ACGTACACACAAGCAATTATATTATC-A--TCTTC-ATTTCTTTC-TTA
1 AAACTATC-TCAAGCGA-G-ATA-A-AATC--TTCTGTT-TCGAGGGAAACTATCTCAAGCGAGA
*** * * ** ** * *** * * **
18272 TTTTATC-AC--TATC-ATTGATTCCTTTCATCATATG-GTTTTATAAGT-TACCATTT-GTA--
58 TAAAATCTTCTGTTTCGAGGGA-AACTATC-TCA-A-GCGAGATA-AAATCTTCTGTTTCG-AGG
*
18328 C
117 G
* * * ** * ****** *** * * *
18329 AATCAATATC-A-C-CCATGAAA--TTCCACAAGGAAACAAACATATTATCACATC-ACTTTATT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TA-TCTCA-AGCGA---GA-T
* * * ** ** * * * * * * *
18388 AATAT-TATCTATTT-AATAG-CTCATGATACTCATGTGAGAACTAAAGATATGCGAGTACATAG
59 AAAATCT-TCTGTTTCGAGGGAAAC-T-AT-CTCAAGCGAG-A-TAAA-ATCTTC-TGT--TTCG
18450 AGGTTG
114 AGG--G
** * * * ** ** * *
18456 TGCACTAATGCTGTCACCA-C-AGCTCATATAAT-TG---C-ACCG-AAGT-GC-C-A-CGTAGA
1 -AAACT-AT-C--TCA--AGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCG-AG-
*** **** ** * * * * * * * * ** *
18509 ATTGCA-CCGGAGTGCCG-CGTAGAATTGCACCGT-AGTGCCATATAATAAT-GTC--CAT--AA
57 ATAAAATCTTCTGTTTCGAGGGA-AACT--ATC-TCA-AGCGAGATAA-AATCTTCTGTTTCGAG
18566 GG
116 GG
* * * ** ** * * ** * *
18568 ACCACATATCATTCCTTAAGACTCATATAAATATAC-TAGGGATC-A-AGTATGTGTCTC-A-CC
1 A-AAC-TATC--T-C--AAG-C-GAGATAAA-AT-CTTCTGTTTCGAGGGAAACTATCTCAAGCG
* * * * ** * * * *
18628 AGACTTCACA-C--ATG-TTCCAAAGAATACATATATGTCTCGAAG-GACCA-CATATCATTC-C
55 AGA--TAAAATCTTCTGTTTCGAGGGAA-AC---TA--TCTC-AAGCGA-GATAAAATC-TTCTG
** ***
18686 TTAAGAATC
109 TTTCGAGGG
* * * * * ** * * *
18695 ATATACATATACT--AG-G-GATCAAGT-ATGTGTCTC-A-CCAGACT-TCACACATGTTCCA-A
1 A-A-AC-TAT-CTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCA-A-G--CGAGA
* * ** * * * ** ** * * *
18751 -AGAATACATATATGTCCCGAAGGACCAC-ATATCATTC--CTTAAGAATCATATACAT-ATGCC
58 TAAAAT-C-T-TCTGTTTCGAGGGA-AACTATCTCAAGCGAGATAA-AATC-T-T-C-TGTTTCG
*
18811 AAGG
114 AGGG
* * * * ** *
18815 ATCAAGTATGTGTCTC-A-CCAGACT----TCATACATG-TTCCAAAGAATACATATATGTCCCG
1 A--AACTA----TCTCAAGCGAGA-TAAAATC-TTC-TGTTTCGAGGGAA-AC---TA--TCTC-
* * * * * ** ** * *** * *
18873 AAG-GACCACATAGACCCTC-GACTC-TTGG---C-ATGC-CAA-C--TAT-ACCCCTAGCTCTC
50 AAGCGA-GATA-AAATCTTCTGTTTCGAGGGAAACTAT-CTCAAGCGAGATAAAATCT-TCTGT-
* ***
18926 AT-GACAC
110 TTCGAGGG
* * ** * * * * * * * *
18933 ATAAC-ATGGTCATTATC--TTTTATATCCTTTTACATATTC-ATGTAACCATATCAT-ATATTC
1 A-AACTAT-CTCA--AGCGAGATAAAAT-CTTCT--GT-TTCGAGGGAAAC-TATC-TCA-A-GC
* ** * * *** * * * * ** * *
18993 -ATATAAGCTCAT-GGTTTC-ATTCACATA-TATATGTAATC-ACGTATTTCAGGTCAAT-TGTC
54 GAGATAAAATCTTCTGTTTCGAGGGA-A-ACTATCT-CAAGCGA-G-A--TAAAATC-TTCTGTT
* **
19052 ACATGAGTTC
111 TC--GAG-GG
* * * * ** * * * *** * *
19062 ATATTCATAT-AAGCATAGGAT-TCACCCTCATGTATC-ACATATACTTTCTCTTTCATATG-GC
1 AAACT-ATCTCAAGC-GA-GATAAAATCTTC-TGTTTCGAGGGAAAC--TATC--TCA-A-GCG-
** * * * * * * * * *
19123 TCATAACATTTCTCATGTGTTC-A--TATAAC-ATGTAAATC-A-TTGACATCTTATCATGTTAT
55 AGATAAAATCT-TC-TGT-TTCGAGGGA-AACTATCTCAAGCGAGATAAAATC-T-TC-TGTT-T
***
19182 C-ACAT
112 CGAGGG
* * * * * * *** *
19187 AAACATATCATCTTACAATACATACAAAACACATCAATACATATATTC-ACATATACGTATCATT
1 AAAC---T-ATC-T-CAA-GC-GAGATAA-A-ATC--TTC-TGT-TTCGAGGGAAAC-TATC---
* *** * * * * ** * * ********* ** *
19251 TCATTATCCTTAT-TATTATTCT-TATC-A-TCACCATTAATCCTTTTTTTTCTTACCATATTC-
48 TCA--AGCGAGATAAAATCTTCTGTTTCGAGGGA-AACT-AT-CTCAAGCGAGATAAAATCTTCT
* * **
19311 ATATC-A-AT
108 GTTTCGAGGG
* * * * ** * *
19319 AACACATATACTCATGCACACATATAAA---TC-ATAAC-A---AATAC-ATACTTCTA-TGA-A
1 AA-AC-TAT-CTCAAGC-GAGATA-AAATCTTCTGTTTCGAGGGAA-ACTAT-C-TCAAGCGAGA
** * * * * * * * * * * ****
19373 T-TCATGTT-T-TTCACTATTGGAAA-TAGACT-TATC---A-CAAGTCTTAT-TTTCCCTTG
58 TAAAATCTTCTGTT-TCGA-GGGAAACTA-TCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * ** * ** *** ** * * *
19426 AACCTCATATACTAGAGAAGGTGCACTCACCTTAGCTTT-GCTTTGATTCGAT-TCTAATC---C
1 AAACT-ATCT-CAAGCG-AGATAAAATCTTC-T-G-TTTCG-AGGGAAACTATCTC-AAGCGAGA
* * * * **** * * * *
19486 T----TCAGT-TGATTCGGAACGGGATCACGT-TCT-ATATC----TTTTCTCTT-GGCTTCCAC
58 TAAAATC-TTCTGTTTC-G-A-GGGA-AAC-TATCTCA-AGCGAGATAAAATCTTCTGTTTCGAG
*
19539 GT
116 GG
** **** ** * * * * ** **** * * * *
19541 AAAGAAGAAGAAGAAAGGAGAAGAGCACTCTG--GAGA-ATTCACTCCCTTTCCA-CGTGTATAT
1 AAACTATCTCAAGCGA-GATAAAATC-TTCTGTTTCGAGGGAAACT--ATCTCAAGCGAG-ATA-
* * * ** ** * *** ** * ** *
19602 AACTCCATTTTTTTTTAAATGATCAAATGA-C-CAATTTACCCTGTATTTCCTT-TAATAATTAC
60 AAAT-C-TTCTGTTTCGAGGGA--AACT-ATCTCAAGCGA-GAT-AAAAT-CTTCT-GT--TT-C
* ***
19664 TAAAT
113 GAGGG
* * * * ***** **
19669 AACCT-TCATCATA--TATATCCAATAATCATTGAACTATTTC-A-TTCTTCTA-CTTTAGTC--
1 AAACTATC-TCA-AGCGAGAT--AA-AATC-TT---CTGTTTCGAGGGAAACTATCTCAAG-CGA
* * * ** * * * * * *
19726 -ATCAAA--TTCTGAAACTTTACAAATTGGTCACTAACCCATAATTTGGGATGTTACAAACCATC
56 GATAAAATCTTCTG----TTT-C-GA-GGGAAACTATCTC--AA---GCGA-GATA-AAATCTTC
**** **
19788 TCAAGCGAGAT
107 TGTTTCGAGGG
* * ** * * **** ** * * ** *
19799 AAAATAT-T-ATGTTTCGAG-GGAAACCATCTCAAGCGAGATAAACTCT-TC-TGTTTA-ATGGG
1 AAACTATCTCAAG---CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG-CGAGAT--A
**** ** *** ** * **** **
19858 AAA-CTATCTAAAGCGAGATAAA--ATCTTTTGTTTCGAGGGAAACTC-TCTCAAGCGAGATA
60 AAATCT-TCTGTTTCGAGGGAAACTATCTCAAG---CGAGATAAAATCTTCTGTTTCGAG-GG
**** ** ***** ** **** **
19917 AAATCT-TCTGTTTCGAG-GGAAA-CTATCTCAAGAGAGATAAAATCT-TCTGTTTCGAGGGAAA
1 AAA-CTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAG-GGAAA-CTATCTCAAGCGAGATAAA
** * ** **** * *** **
19978 AGATTCAAG---CGAGATAAAATCT-TCTTTTTC-A-ACAGAAA-CTATCTAAATCGAGAC
62 ATCTTC-TGTTTCGAG-GGAAA-CTATCTCAAGCGAGATA-AAATCT-TCTGTTTCGAGGG
* * **** ** ** ** * **** **
20032 AAAATATTTTGTTTCGAG-GGAAA-CTATCT-TAAGCGAGACAAA--ATCTTCTATTTTGACGGA
1 AAACTA-TCTCAAGCGAGATAAAATCT-TCTGT-TTCGAGGGAAACTATC-TCAAGCGAGA-TAA
**** *** * * ** *
20092 AA-CTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATAT
61 AATCT-TCTGTTTCG-AGGGAAA----CTATCTC--AAG---CGAGAT-AA---A-AT---CT-T
* ** * *
20156 -TCTATTTCAAGA
106 CTGT-TTCGAGGG
* * *
20168 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAAAT-
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAG-ATAAAATC
* * *** *
20232 TTCTATTTCGAGGG-AACAAATCTCAAAAAAGAGAAAATCTTCTGTTTCGAGGG
65 TTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
20285 AAACTATCTCAAGCGAGATAAAATATT-TCGTTTTGAGGGAAACTATATCAAGCGAGACAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGGGAAACTATCTCAAGCGAGATAAAAT-
* * * * * * * *
20349 CTTTTTTTTTGAGGGAAAATATATCAAGCAAGAAAAAATCTTATGTTTCGAGGG
64 CTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
20403 AAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGGAAACCATCTCATGCGAATCTCAAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG-AA--A---C-T----ATCTCAAGCG
** * * **
20468 AGATAAAATCTTCTGTTTCGAGGGAAAAGAT-TCAAACGAGATAAAATCTTCTTTTTCGACAG
55 AGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
20530 AAACTATCTAAAGCGAGACAAAATATTTTGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * **
20595 TCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
20647 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGAAAACTAACTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
20711 TCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
20763 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAA--
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * * *
20825 TTCTGTTTTGAGGGAAATTATATCAAGCGAGACAAAATCTTTTTTTTTCGATGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC-TTCTGTTTCGAGGG
* * * * * * *
20879 AAACTATATCAAGCAAGAAAAAATCTTATGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*
20944 TCTGTTTCGAGGGAAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGG-AA--A---C-T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * ** * * *
21007 AAAAGAT-TCAAGCGAGATAAAATCTTCTTTTTCGACAGAAACTATCTAAAGCGAGACAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
21071 TTTGTTTCGAGCGAAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * ** *
21123 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
21188 TCTATTTC-AAGAAAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
21239 AAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG-AACATATCTCAAACAAGAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* *
21303 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * * * *
21356 AAATTATATCAATCGAGACAAAATCTTTTTTTTTTCGAGGGAAACTATATCAATCAAGAAAAAAT
1 AAACTATCTCAAGCGAGATAAAATC--TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAAT
* * * * * *
21421 CTTATGTTTTGAGGGAAACTATCTAAAGCGTGAAAAAATCTTATGTTTCGAGGG
64 CTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* ** **
21475 AAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCAATTTCGAGGGAAAAGAT-TCAAGCG
1 -AA--A---C-T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCG
* ** * * *
21539 AGATAAAATCTTCTTTTTCGACAGAAACTATCTAAAGCGAGA-CAAATATT-TGTTTCGAGGG
55 AGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
21600 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** * * * *
21665 TCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
21716 AAACTAACTCAAGTGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAATTT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
21781 TCTATTTCGAGGG-AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGTG
66 TCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
21833 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC-
* * * * *
21898 TTTTTTTTCGAGGGAAACTATATCAAGCAAGA-AAAATCTTATGTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
21950 AAACTATCTAAAGCGTGAAAAAATCTCCTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
22015 TTTGTTTCGAGGGAAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
22067 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
22132 TCTGTTT-AATGGGAAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
22184 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
** * * * * *
22249 TCTGTTTCGAGGGAAAAGAT-TCAAGAGAGATAAAAACTTATTTTTCGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
22300 AAACTATCTCAAGCGAGACAAAATCTTTTGTTTTGAGGGAAACTATCTTAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * **
22365 TCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTAGAAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
22417 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGAAAACTAACTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
22481 TCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAAAT-TTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAG-ATAAAATCTTCTGTTTCGAGGG
* * * * *
22533 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
22597 TTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
22649 AAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGTGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
22714 TCTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCTTCTATTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
22766 AAACTATCTCAAGCGAGAAAAAATCTTATGTTTCGAGGGAAACCATATCAAGCGACATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
22831 TATGTTTCTAGGGAAACCATCTCAAGCAAGATAAACTCTTCTGTTTC-ATGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * * *
22883 AAACTATCTAAAGCGAGATAAAATCTTATGTTTTGAGGGAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
22948 TTTGTTTCAAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
23000 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGGAAAATATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
23064 TTTGTTTCGAGAGAAACTATCTTAAGCGAGAAAAAATCTTCTATTTGGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * ** *
23116 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
23181 TCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCTTCTGTTT-GAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
23231 AAACTATCTCAAGCGAGA-AAAATCTTCTATTTCGAGGG-AACATATCTCAAACAAGAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * * * *
23294 TTCTATTTCGAGGGAAACTATCTCAAGCGAGACAAAATATTTTGTTTTGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
23347 AAACTATATCAAGCGAGACAAAATCTAT-TTTTTCGAGGGAAACTATATCAAGCGAGAAAAAATC
1 AAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * * *
23411 TTCTGTTTCGAGGGAAACTAACTAAAGCGTGACAAAATCTTATGTTTTGAGAG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
23464 AAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGGGAAAGTATCTCAAGCGAGA-AAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
23528 TCTATTTCGAGGGAAACTATCTCAAGCGAGACAAAATATTCTATTTAGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
23580 AAACTATCTCATGTGAGACAAAATCTTCTATTTCTG-GAGAAACTATCTCAAGAGAGATAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * *
23644 TTCAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* **
23697 AAACTATCTCAAGCGAGGCT--AA--TTC----TC-----AAACTATCTCAAGCGAGGCAAAATC
1 AAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * *
23749 TACAGTTTCGAGGGAAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
23802 AAACTATCTCAAGCGAGACAAAATCTTCTATTTCAAGAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
23867 TCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
23918 AAACTATCTTAAGCGAGAAAAAATATTTTGTTTCGAGGGAAACTATCTCAA--GACATAATCTGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAA----A
* **** ** ***** ** **** **
23981 AACTATCTCAAGCGAGACAAAATCT-TCTGTTTTGAG-GGAAA-CTATCTCAACCGAGAC
62 ATCT-TCTGTTTCGAG-GGAAA-CTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGG
* * * * **** ** *
24038 AAA--ATCTTATGTTTCGAG-GAAAA-CTATTTCAAGCGAGAAAAAATATATTGCTTCAAG-G-G
1 AAACTATCTCAAG---CGAGATAAAATCT-TCTGTTTCGAG-GGAAA-CTA-T-C-TCAAGCGAG
* * ** * * * ** * * **** *
24097 A-AACCATC-TCAAG---CGAGATAAAATAT-T-ATGTTTCAAG-GGAAACCATCTCAAGCGAGA
57 ATAA-AATCTTC-TGTTTCGAGGGAAACTATCTCAAG---CGAGATAAAATCTTCTGTTTCGAGG
*
24154 T
117 G
*** ** * **** ** *** **
24155 AAA--ATCTTTTGTTTCGAGGGAAACTC-TCTCAAGCGAGATAAA--ATCTTTTGTTTCGAGGGA
1 AAACTATCTCAAG---CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG---CGAGATA
* **** ** * * * **
24215 AACTC-TCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATC
60 AAATCTTCTGTTTCGAG-GGAAA-CTATC----TCAAGCG--A-GA--T--A-A-A-AT--CTTC
*** *
24278 T-TCTGTTTCGAGC
107 TGT-T-TCGAG-GG
* * ** * * * * *
24291 GAA-AAGATTCAAGCGAGATAAAATCTTCTATTTCGATGGAATCTATCCCAAGCGAGACAAAATC
1 AAACTA-TCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
24355 TTTTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCTTCTGTTTCAAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
24408 AAACCATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
24473 TTTATTTTGAGGGAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * ** *
24525 AAACTATCTCAAGAGAGATAAAATCTTATGTTTCTAGCGAAAAGAT-TCAAGCGAAATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
24589 TCTGTTTCGACGGAAACTATAC-CAAGCGAGACAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTAT-CTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
24641 AAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGAGATAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATC
* * *
24705 TTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCAAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * **
24758 AAACTATCTCAAGAGAGATAAAATCTTCTGTTCCGAGGGAAAAGAT-TCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
24822 TCTATTTTGACGGAAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
24874 AAACTATCTTAAGCGAGACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* ** * * * *
24939 TCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
24990 AAACTATCTCAAGCGAGATAAAATCATCTGTTTTGAAGGAAACTATCTCAAGCGAGA-AGAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
25054 TCTATTTCAAGGG-AACATAGCTCAAACAAGAGAAAATCTTCTGTTTCGATGG
66 TCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
25106 AAACTATCTCAAGTGAGACAAAATATTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
25171 T-TTTTTTGAGGGAAACTATCTCAAGCGAGAAAAAATCTTCTATTTCGAGGC
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
25222 AAACTATCTAAAGTGTGACAAAATCTTCTGTTTCGAGAGAAACTATCTCATGCGAGATAAAAT-T
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
25286 TTTAGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
66 TCT-GTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
25339 AAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGGGAAACTATCTCAAGTGAGA-AAAACCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * ** *
25403 TATATTTCTG-GAGAAACTATCTTAAGAGAGTTAAAAGATTCTATTTC-AGGG
66 TCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
25454 AAACTATATCAAGCGAGATAAAATCATCAGTTTCAAAGGAAACTCTCTCAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
25519 TTTGTTTCGAGGGAAACTATCTCAAGCGAGGCT--AA--TTC----TC-----
66 TCTGTTTCGAGGGAAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGG
* * * * * *
25559 AAACTATCTCAAGCGAGGTAACATCTACAGTTTCGAGGGAAACTATCTCAAGTGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
25624 TCTATTTGGAGGGAAACTATCTCAAGCGAGACAAAATCATAT-TTTCAAGAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
25675 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
25739 TCTGTTTCGAAGGAAACTATCTTAAGCGAGAAAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
25791 AAACTATCTCAAGCGAGACATAA---TC----TC-----AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
25844 TCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
25896 AAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGGAAACCATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
25961 TATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * *
26013 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*
26078 TCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * *
26130 AAAAGAT-TCAAGCGAGATAAAATCTTATTTTTCGACGGAAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
26194 TTTGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * ** *
26246 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * ** * *
26311 TATATTTC-AAGAAAACTATCTCAAGTGACTTAAAATATTCTATTTC-AGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26361 AAACTATCTGAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATATTAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
26426 TTTGTTTCGAGGGAAACTATCTCAAGCGTGACATAA---TC----TC-----
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
26466 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
26531 TATGTTTCGAAGGAAACTATTTCAGGCGAGAAAAAATATT-TTTCTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGT-TTCGAGGG
* * * * *
26583 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGGAAACAATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
26648 TTTGTTTCGAGGAAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGT
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
26700 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* ** *
26765 TCTGTTTCGAGCGAAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTCGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26816 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * **
26881 TCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26933 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
26997 TCTGTTTCGAAGGAAACTATCTCAAGTGAGAAAAAATATTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
27049 -AACATATCTCAAACAAGAGAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * *
27113 TTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
27166 AAACTATATCAAGCAAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
27231 TCTGTTTCGAGGGAAACCATCTCATGCGATATAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * **** **
27283 AAACTATCTCAAGTGAGACAAAATCTTATGTTTCGAGGGAAACCA--TGAAAC-ACCCCAACCCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC-
*** ** * * * ** ** *
27345 TATCTGACCCGGATTCGAATCCGAGGTGTCACATTGACCTTTAAAAACATGTACTTGTATAAAAT
65 T-TCTGTTTC-GA-GGGAA-ACTA--TCTCA-AGCGA--GATAAAATC-T-T-C-TGT-T----T
* * *
27410 AGTGAGT
112 CGAG-GG
* * * * * ** * *** * ** *
27417 AAATTAAAATTTTATAAC-ATAT-AAATGACTAAT-TTAC-ATAAAAGAC-ATTTTC-A-TTATT
1 AAACT---ATCTCA-AGCGAGATAAAAT--CTTCTGTTTCGAGGGAA-ACTA-TCTCAAGCGA-G
* * * * ** * * * * * *** * * *
27475 ACAAAACCAATCAG-AGC-A-TGTATCTTTCACTTATTATTTACATATAACTATTC-GAAACATT
57 ATAAAATC-TTCTGTTTCGAGGGAAACTAT--CTCA--AGCGAGATA-AAATCTTCTG-----TT
**
27536 T--A-TA
111 TCGAGGG
** * * * * **
27540 AAACGGT-TCATAGCTTAAACAATAGATTCT-TTT-GA---AAAC-ATGC-CAA-C----TAAAA
1 AAACTATCTCA-AGC-GAGATAAAATCTTCTGTTTCGAGGGAAACTAT-CTCAAGCGAGATAAAA
* * * * ** * **** * * *
27592 -CTT-TATATACTA--AAATACCTAT-T-ATTC-ACATCTTTTCTGATCTGACCTTTAGTAAGA
63 TCTTCTGT-TTCGAGGGAA-A-CTATCTCAAGCGAGATAAAATCT--TCTG---TTTCG-AGGG
* ** * * *** * *
27649 AGAACTGACCTGTCTTGCTCCACAT-TGCTCTTTACTCTTCTC----GAAAC---CT--A-CGTG
1 A-AACT-A--TCTCAAG--CGAGATAAAATC-TT-CTGTT-TCGAGGGAAACTATCTCAAGCGAG
* * * ** * * * * * **** *
27703 -T-AAATCACTTACACG-CT-AAGTCAAA-GA-CT-TAGTGAGGCATATAAA-CATATAAGGCAA
57 ATAAAAT--CTT-C-TGTTTCGAGGGAAACTATCTCAAGCGA-G-ATA-AAATCTTCTGTTTC-G
**
27760 ACAG
114 AGGG
* * * * * * * * *** * * * *
27764 TAACTAATAATCATACCTA-A-ACAAT-TACTACTATC-ATTTCATACCA-CTCATA-CTTTTAC
1 AAACT-AT-CTCA-AGCGAGATAAAATCTTCT-GTTTCGA-GGGAAACTATCTCA-AGC---GAG
** *** * *** * * * * * * *
27823 ATGTAA-CAAATGTAT-GCATACATA-TATGTCATTATC-A-TTCATATC-TCT-TATCTC-A-T
57 ATAAAATCTTCTGTTTCG-AGGGAAACTATCTCA--AGCGAGATAAAATCTTCTGT-T-TCGAGG
27879 G
117 G
*** * * * * * ** * * * * * * *
27880 TTCCTATGATCTCTTATGTCCATATCATAT-AACAT-ATACCA--TAACCAAT-TGC-A-C-ATA
1 AAAC--T-ATCTC--AAG-CGAGATAAAATCTTC-TGTTTCGAGGGAAACTATCT-CAAGCGAGA
* ** * *** * * * * * ** *
27937 TACATATCATGTCATGTAACCTATATATA-TATAT-ATA-CTATCATAAAA-C-AC-GTACACCC
58 TA-AAATC-T-TC-TGT-TTCGAGGGAAACTATCTCA-AGCGA-GATAAAATCTTCTGT--TTCG
*
27996 A-AG
114 AGGG
* * * * *** **** * * * ** ** *
27999 AAATTATATTATCATCTTCATTTCTTTCTTATTTTATCACTATCATTGATTCCTTTCATCATATG
1 AAACTATCTCA--AGCGAGA-TAAAATCTTCTGTT-T--C---GAGGGA-AACTATC-TCA-A-G
*** * * ** * * * * ** * ****** *
28064 -GTTTTATAAGT-TACCATTT-GTA--CAATCAATATC-A-C-CCATGAAA--TTCCACAAGGAA
53 CGAGATA-AAATCTTCTGTTTCG-AGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG
**
28119 AC
116 GG
* * * * * * ** ** * *
28121 AAACATATTATCACATC-ACTTTATTAATAT-TATCTATTT-AATAG-CTCATGATACTCATGTG
1 AAAC-TA-TCTCA-AGCGA---GA-TAAAATCT-TCTGTTTCGAGGGAAAC-T-AT-CTCAAGCG
* * * * * ** * * * **
28182 AGAACTAAAGATATGCGAGTACATAGAGGTTGTTCACTAATGCTGTCACCA-C-AGCTCATATAA
55 AG-A-TAAA-ATCTTC-TGT--TTCGAGG--G-AAACT-AT-C--TCA--AGCGAGATAAAATCT
**
28245 T-TG---C-ACCG
105 TCTGTTTCGAGGG
* * *** **** ** * * * * * * *
28253 -AAGT-GC-C-A-CGTAGAATTGCA-CCGGAGTGCCG-CGTAGAATTGCACCGT-AGTGCCATAT
1 AAACTATCTCAAGCG-AG-ATAAAATCTTCTGTTTCGAGGGA-AACT--ATC-TCA-AGCGAGAT
* ** * * * ** ** * * *
28310 AATAAT-GTC--CAT--AAGGACCAC-ATATCATTC--CTTAAGAATCATATACAT-ATACTAGG
59 AA-AATCTTCTGTTTCGAGGGA-AACTATCTCAAGCGAGATAA-AATC-T-T-C-TGTTTCGAGG
28366 G
117 G
* * * * * * ** * ****
28367 ATCAAGTATGTGTCTC-A-CCAGACTTCACA-C--ATG-TTCCAAAGAATACATATATGTCCCGA
1 A--AACTA----TCTCAAGCGAGA--TAAAATCTTCTGTTTCGAGGGAA-AC-TATCTCAAGCG-
* * * ** *** ** * * * * *
28426 AGGACCACATATCATTC-CTTAAGAATCATATACATATGCCAA--G-GATCAAGT-ATGTGTCTC
55 A-GA-TA-AAATC-TTCTGTTTCGAGGGA-A-AC-TATCTCAAGCGAGATAAAATCTTCTGTTTC
**
28486 -A-CC
113 GAGGG
* * * * * * * * * * **
28489 AGACT-TCATACATGTTCCA-A-AGAATACATATATTTCCCGAAGGACCACATAGACCCTCGACT
1 AAACTATC-T-CAAG--CGAGATAAAAT-CTTCTGTTT--CGAGGGA-AAC-T--A-TCTC-AAG
* ** * * * ** * ** * *
28551 CTTG-GCATGCCAACTATACCCCTAGCTCTC-A-TGACAC-ATAACATG-GTCAT--TATCTTTT
53 C--GAG-AT---AA-AAT-CTTCT-G-TTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCT
* * *****
28609 ATATCCTTTT
108 GTTTCGAGGG
* * * * * * * * * * *** *** *
28619 ACA-TAT-TCATGTAACCATATCATATATTCATATAAGCTC-ATGGTTTC-AT-TCACATATATA
1 AAACTATCTCA---AGCGAGATAAAATCTTC-TGT---TTCGAGGGAAACTATCTCA-AGCGAGA
** *** * ** * ** * * * * *
28679 TGTAATCAAGTATTTC-AGGTCAA-T-TCTCACA-TGAG-T-TCATATTC-ATAT--AAGC
58 TAAAATCTTCTGTTTCGAGGGAAACTATCTCA-AGCGAGATAAAATCTTCTGTTTCGAGGG
* ** ** * * * * * * *
28731 ATAGGAT-TCACCCTCATGTATCACATATACTTTCTCTTTCATATGGCTCATAACATTTCTCATG
1 AAACTATCTCAAGC-GA-G-AT-A-AAAT-C-TTCTGTTTC-GA-GG--GA-AAC-TATCTCAAG
* ** * * * *** ** ** * * * *
28795 TGTTCATATAA-CATGTAAATC-A-TTAACATCTTATCATGTTATC-ACATAAACAT-ATCATCT
53 CG-AGATAAAATCTTCTGTTTCGAGGGAA-A-C-TATC-T-CAAGCGAGATAAA-ATCTTC-TGT
*
28855 TAC-A---
110 TTCGAGGG
* * * * * * * * *** * * ***
28859 ATAC-A-CACAAAAC-ACAT-CAATACATAT-ATTC-ACATATACGTATCATTTCATTATCCTTA
1 AAACTATCTC-AAGCGAGATAAAAT-CTTCTGTTTCGAGGGAAAC-TATC---TCA--AGCGAGA
* * * * ** * * *** ***** ** * * * **
28918 T-TATTATTCT-TATC-A-TCACCATTAATCCTTTTGTTTTCTTACCATATTC-ATATC-A-AT
58 TAAAATCTTCTGTTTCGAGGGA-AACT-AT-CTCAAG-CGAGATAAAATCTTCTGTTTCGAGGG
* * * ** * *** * *
28975 AACACATATACTCATGC-ACATATAAA---TC-ATAACAATACATACT-TCT--A-TGA-ATTCA
1 AA-AC-TAT-CTCAAGCGAGATA-AAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGA-T-A
*** * ** * *** * * ** ***** * * *
29030 TGTTTTTCACTATTGGAAATAGACTTATCACAAGTC-TTATTTTCCCTTGAACCTCATATACTAG
60 AAATCTTCTGT-TTCGAGGGAAAC-TATCTCAAG-CGAGATAAAATCTT----CT-GT-TTCGAG
*
29094 AG
116 GG
** * * * * * ** *
29096 AAGGTGCA-CTC-ACCTTAGCT---TTGCTT-TGATTCGA-TTATAATCCTTCAGTTGATTCGAA
1 AAACT--ATCTCAAGC-GAGATAAAAT-CTTCTGTTTCGAGGGA-AA--C-T-A--T--CTC-AA
* * *** *** * * *
29154 ACGGGATCACGTTCTATATCT-TTTCTCTTGG---CT-TC-C-A-CGTAAAGAAGAA------GA
52 GCGAGAT-AAAATC--T-TCTGTTTC-GAGGGAAACTATCTCAAGCG-AGATAA-AATCTTCTGT
****
29205 AGAAAGGAG
110 TTCGAGG-G
* * ** * * * * *******
29214 AAGAGC-A-CTC-TG-GAG---AATTCTCTCCCTTTCCACGTGTATA-TAACTCCATTTTTTTTA
1 AA-A-CTATCTCAAGCGAGATAAAATCT-TCTGTTTCGA-G-GGAAACTATCT-CAAGCGAGATA
*** ** * *** ** * ** * * * *
29271 AATGATCAAATG-ACCAATTTACCCTTTATTTCCTTTAA-TAATTACTAAATAACCTTCATCATA
60 AA--ATCTTCTGTTTCGAGGGAAAC--TA--T-C-TCAAGCGA-GA-T-AA-AATCTTC-T-GTT
** ***
29334 TATATCC
111 TCGAGGG
* * * * ** * * ** * * * *** *
29341 AATAATCAT-TGAA-CTA-TTTCATTCTTCTACTTT--AGTCATCAAAT-TCTGAAACTTTACAA
1 AA-ACT-ATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGGGA--AACTATCTCAAGCGAGATAA
* * * * ** * * *
29400 ATTGGTCACTAACCCATAATTTGGGATGTTACAAACCATCTCAAGCGAGATAAAATATTATGTTT
61 A---AT--CT---TC-T-GTTT-CGA-G--GGAAACTATCTCAAGCGAGATAAAATCTTCTGTTT
29465 CGAGGG
112 CGAGGG
* * * * *
29471 AAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGGAAACTATCTAAAGTGAGATAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATC
* *
29535 TTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * ** * * *
29588 --A--ATCTCAAGAGAGATAAAATCTTCTTTTTCGACAGAAACTATCTAAAGCGAGACAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
29649 TTTGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * ** * *
29701 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAGAAACTATCTCAAGCGAGAGAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
29766 TCTATTTC-AAGAAAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
29817 AAACTATCTCAAGCGAGAAAAAATTTTCTGTTTCGAGGG-AACATATCTCAAACAAGAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* *
29881 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
29934 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGGAAACTATATCAAGCAAGAAAAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAG-ATAAAATC
* * * * *
29999 TTATGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCTCCTGTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* **
30052 AAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGGAAAAGAT-TCAAGCG
1 -AA--A---C-T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCG
* ** * * * *
30116 AGATAAAATCTTCTTTTTTCGATAGAAACTATCTAAAGCGAGACAAAATATTTTGTTTCGAGGG
55 AGATAAAATCTTC-TGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
30180 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** * * * *
30245 TCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
30296 AAACTAACTCAAGCGAGATAAAATATTCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAATTT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
30361 TCTATTTCGAGGG-AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
30413 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
30478 TTTTTTTCGAGGGAAACTATATCAAGCAAGAAAAAATCTTATGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
30530 AAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
30595 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
30647 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
30712 TCTGTTT-AATGGGAAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
30764 AAGCTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
** * * *
30829 TCTGTTTCGAGGGAAAAGAT-TCAAGCGAGATAAAATCTTATTTTTCGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
30880 AAACTATCTCAAGCGAGACAAAATCTTTTGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * **
30945 TCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
30997 AAACTATGTCAAGCGAGATAAAATATTATATTTC-AAGAAAACTAACTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
31061 TCTGTTTCGAAGGAAACTATCTAAAGCGAGAAAAAATTTTCTTTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
31113 -TACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * *
31177 TTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
31230 AAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGTGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
31295 TCTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCTTCTATTTCGAGAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
31347 AAACTATCTCGAGCGAGAAAAAATCTTATGTTTTGAGGGAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
31412 TTTGTTTCAAGGGAAACTATTTCAAGAGAGATAAAATCTTATGTTTCAAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
31464 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGGAAAATATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
31528 TTTGTTTCGAGAGAAACTATCTTAAGCGAGACAAAATCTTCTATTTGGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * ** *
31580 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGAGAT-AAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
31644 TCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *** * *
31695 AAACTATCTCAAGCGAGA-AAAATTTTCTATTTCGAGGG-AACATATCTCAAAAAAAAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * * * * * *
31758 TTCTATTTCGAGGGAAACTATCTCAAGCAAGACAAAATATTTTATTTTGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
31811 AAACTATATCAAGCGAGACAAAATCTAT-T-TTTCGAGGGAAACTATCTCAAGCGAGAAAAAATC
1 AAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * *
31874 TTCTGTTTCGAGGGAAACTATCTAAAGCGTGACAAAATCTTCTGTTTTGAGAG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
31927 AAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGGGAAAGTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
31992 TCTATTTCGAGGAAAACTATCTCAAGCGAGACAAAATATTCTATTTAGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * **
32044 AAACTATCTCATGTGAGACAAAATCTTCTATTTCTG-GAGAAACTATCTTAAGCGAGTTAAAAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
32108 TTCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
32160 AAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGGCT--AA--
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA-GATAAAATC
** * * *
32221 TTC----TC-----AAACTATCTCAAGCGAGGCAAAATCTACAGTTTTGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
32265 AAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGAGGCAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
32330 TCTATTTCAAGAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
32381 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGAGAAAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
32446 TTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAAA----C----T-----G
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATA-AAATCTTCTGTTTCGAGGG
* * * *
32486 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGAGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
32551 TATGTTTCGAGGAAAACTATTTCAAGAGAGAAAAAATCTAT-T-CTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGG
* * * * * *
32602 AAACCATCTCAAGCGAGATAAAATATTATATTTCAAGGGAAACCATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
32667 TTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
32719 AAACTCTCTCAAGCGAG-TTAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** * * *
32783 TCTGTTTTGAGCGAAAAGAT-TCAAGCGAGATAAAATTTTCTATTTCGATGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
32834 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
32899 TCTGTTTCAAGGGAAACCATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
32951 AAACTCTCTCAAGCGAGATAAAATCTTTTATTTTGAGGGAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
33016 TCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTATGTTTCTAGCG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * *
33068 AAAAGAT-TCAAGCGAAATAAAATCTTCTGTTTCGACGGAAACTATCCCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
33132 TTTGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * *
33184 AAACTGTCTAAAGCGAGATAAAATCTT-TAGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * *
33248 TTATGTTTCAAGGGAAACTATCTCAAGAGAGATAAAATCTTATGTTTCGATGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * * *
33301 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGAAAAATATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * * * *
33365 TTTTTTTCGAGAGAACCTATCTTAAGTGAGA-AATAATATTCTATTTGGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAA-AATCTTCTGTTTCGAGGG
* * * * ** *
33417 AAACTATCTCAAGAGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
33482 TATATTTC-AAGAAAACTATATCAAGCGAGATAAAATCTTCTGTTTTGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
33533 AAACTATCTCAAGCGA-A-AAAATCTTCTATTTCGAGGG-AACATATCTCAAACAAGAGAAGATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * * *
33595 TTCGGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATATTCTGTTTTGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
33648 AAACTATATCAAGGGAGACAAAATCTTTTTTTTCGAGGGAAACTATCTCAAACGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *** * *
33713 TCTGTTTCGAGGGAAACTATCTAAAGTTTGACAAAATCTTCTGTTTCGAGAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
33765 AAACTATCTTATGCGAGATAAAATTTTCAGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
33830 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATATTTTATTTGGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * * * **
33882 AAACTATCTCAAGTGACACAAAATCTTATATTTCTG-GAGAAACTATCTTAAGTGAGTTAAAAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * *
33946 TTCTATTTC-AGGGAAACTATATCAAGTGAGATAAAATCTTCAGTTTCAAAGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
33998 AAACTCTCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGGCT--AA--
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA-GATAAAATC
* * * *
34059 TTC----TC-----AAACTATCTCAAGCGAGGTAACATCTACAGTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
34103 AAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCAAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
34168 TAT-TTTCAAGAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGGT
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
34218 AAACTATCTCACGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGAGA-AAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
34282 TTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAA---TC----TC-----
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
34322 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
34387 TATGTTTCGAGGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
34439 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
34504 TTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
34556 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGTGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
** ** * * *
34621 TCTGTTTCGAGCAAAAAGAT-TCAAGTGAGATAAAA-ATTCTGTTTCGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
34671 AAACTATCCCAATCGAGACAAAATCTTTTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
34736 TAT-TTCTCGAGGGAAACAATCTCAAGCGAGA-AAAATCTTATGTTTCGAGAG
66 TCTGTT-TCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
34787 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGGAAACTATCTCAAGTGAGATAAACTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
34852 TCTGTTTC-ATGGGAAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * *
34904 AAACTCTCTCAAGCGAGATAATATCTTTTTTTTCGAGGGAAACTATCTAAAGAGTGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
34969 TCTGTTTCGAGAGAAACTATCT-ATGCGAGATAAACTTTTCAGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
35020 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
35085 TCTATTTGGAGGGAAACTATATCAAGTGAGACAAAATCTTCTATTTCTG-GAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** *
35137 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
35201 TCAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * **
35253 AAACTATTTCAAGCGAGGCT--AA--TTC----TC-----AAACTATCTCAAGCGAGGCAAAATC
1 AAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
*** * * * *
35305 TAAAGTTTCTAGGGAAACTATCTCAAGTGAGATAAAATCTTCTATTTGGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
35358 AAACTATCTCAAGCGAGACAAAATCTTCTATTTCAAGAGAAACTATCTCAAACGAG-TCAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGAT-AAAATC
*
35422 TTTTGTTTCGAGGGAAACTATCTCAAGCGAGA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGA
35454 CATAATCTCA
Statistics
Matches: 19325, Mismatches: 4647, Indels: 3174
0.71 0.17 0.12
Matches are distributed among these distances:
103 2 0.00
104 296 0.02
105 1192 0.06
106 32 0.00
107 9 0.00
108 50 0.00
109 40 0.00
110 40 0.00
111 48 0.00
112 83 0.00
113 200 0.01
114 284 0.01
115 1218 0.06
116 6003 0.31
117 7315 0.38
118 464 0.02
119 220 0.01
120 128 0.01
121 123 0.01
122 110 0.01
123 112 0.01
124 97 0.01
125 84 0.00
126 68 0.00
127 241 0.01
128 211 0.01
129 143 0.01
130 100 0.01
131 82 0.00
132 50 0.00
133 42 0.00
134 34 0.00
135 53 0.00
136 68 0.00
137 46 0.00
138 28 0.00
139 7 0.00
141 2 0.00
ACGTcount: A:0.37, C:0.17, G:0.17, T:0.29
Consensus pattern (117 bp):
AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
Found at i:11745 original size:27 final size:27
Alignment explanation
Indices: 11707--11759 Score: 97
Period size: 27 Copynumber: 2.0 Consensus size: 27
11697 ATTTCGAGGG
*
11707 AAACTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCAAGCGAGACAAAATCTC
11734 AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCT
11760 TCTGTTTCGA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.43, C:0.25, G:0.11, T:0.21
Consensus pattern (27 bp):
AAACTATCTCAAGCGAGACAAAATCTC
Found at i:11774 original size:66 final size:66
Alignment explanation
Indices: 11668--11798 Score: 208
Period size: 66 Copynumber: 2.0 Consensus size: 66
11658 GTTTCGAAGG
* * * *
11668 AAACTATCTTAAGCGAGAAAAAATCTTTTATTTCGAGGGAAACTATCTCAAGCGAGACATAATCT
1 AAACTATCTCAAGCGAGAAAAAATCTTCTATTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
11733 C
66 C
* *
11734 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGAAAAAATCTTCTATTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
11799 TATGTTTCGA
Statistics
Matches: 59, Mismatches: 6, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
66 59 1.00
ACGTcount: A:0.39, C:0.21, G:0.15, T:0.25
Consensus pattern (66 bp):
AAACTATCTCAAGCGAGAAAAAATCTTCTATTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
C
Found at i:13660 original size:26 final size:27
Alignment explanation
Indices: 13624--13675 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 27
13614 GTTTGGAGGG
*
13624 AAACTATCTCAA-CGAGACATAATCTC
1 AAACTATCTCAAGCGAGACAAAATCTC
13650 AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCT
13676 TCTGTTTCGA
Statistics
Matches: 24, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
26 12 0.50
27 12 0.50
ACGTcount: A:0.44, C:0.25, G:0.10, T:0.21
Consensus pattern (27 bp):
AAACTATCTCAAGCGAGACAAAATCTC
Found at i:13689 original size:65 final size:66
Alignment explanation
Indices: 13585--13714 Score: 199
Period size: 65 Copynumber: 2.0 Consensus size: 66
13575 GTTTCGAAGG
* * * *
13585 AAACTACCTTAAGCGAGAAAAAATCTTTTGTTTGGAGGGAAACTATCTCAA-CGAGACATAATCT
1 AAACTACCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
13649 C
66 C
* *
13650 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTACCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
13715 TTTGTTTCGA
Statistics
Matches: 58, Mismatches: 6, Indels: 1
0.89 0.09 0.02
Matches are distributed among these distances:
65 46 0.79
66 12 0.21
ACGTcount: A:0.38, C:0.21, G:0.16, T:0.25
Consensus pattern (66 bp):
AAACTACCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
C
Found at i:13737 original size:104 final size:104
Alignment explanation
Indices: 13546--13738 Score: 296
Period size: 104 Copynumber: 1.9 Consensus size: 104
13536 TATTTCAGAG
* * * *
13546 AAACTATCTCAAGCGAGATAAAATCTTTTGTTTCGAAGGAAACTACCTTAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAAGGAAACTACCTCAACCGAGAAAAAATCT
* * *
13611 TTTGTTTGGAGGGAAACTATCTCAACGAGACATAATCTC
66 TTTGTTTCGAGGAAAACCATCTCAACGAGACATAATCTC
* * *
13650 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAAGGAAACTACCTCAACCGAGAAAAAATCT
13715 TTTGTTTCGAGGAAAACCATCTCA
66 TTTGTTTCGAGGAAAACCATCTCA
13739 CGCGAGATAA
Statistics
Matches: 79, Mismatches: 10, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
104 79 1.00
ACGTcount: A:0.37, C:0.20, G:0.17, T:0.27
Consensus pattern (104 bp):
AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAAGGAAACTACCTCAACCGAGAAAAAATCT
TTTGTTTCGAGGAAAACCATCTCAACGAGACATAATCTC
Found at i:15074 original size:27 final size:27
Alignment explanation
Indices: 15036--15088 Score: 97
Period size: 27 Copynumber: 2.0 Consensus size: 27
15026 GTTTCGAGGG
*
15036 AAACTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCAAGCGAGACAAAATCTC
15063 AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCT
15089 TCAGTTTCGA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.43, C:0.25, G:0.11, T:0.21
Consensus pattern (27 bp):
AAACTATCTCAAGCGAGACAAAATCTC
Found at i:15103 original size:66 final size:66
Alignment explanation
Indices: 14997--15127 Score: 217
Period size: 66 Copynumber: 2.0 Consensus size: 66
14987 GTTTCGAAGG
** * *
14997 AAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAATCT
1 AAACTATCTCAAGCGAGAAAAAATCTTCAGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
15062 C
66 C
*
15063 AAACTATCTCAAGCGAGACAAAATCTTCAGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGAAAAAATCTTCAGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
15128 TATGTTTCGA
Statistics
Matches: 60, Mismatches: 5, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
66 60 1.00
ACGTcount: A:0.39, C:0.21, G:0.16, T:0.24
Consensus pattern (66 bp):
AAACTATCTCAAGCGAGAAAAAATCTTCAGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
C
Found at i:15318 original size:19 final size:19
Alignment explanation
Indices: 15258--15318 Score: 50
Period size: 19 Copynumber: 3.2 Consensus size: 19
15248 GTTTCGAGGG
15258 AAACTCTCTCAAGCGAGAT
1 AAACTCTCTCAAGCGAGAT
* * **** *
15277 AAAATCTTTTGTTTCGAGGT
1 AAACTC-TCTCAAGCGAGAT
15297 AAACTCTCTCAAGCGAGAT
1 AAACTCTCTCAAGCGAGAT
15316 AAA
1 AAA
15319 ATCTTCTGTT
Statistics
Matches: 27, Mismatches: 14, Indels: 2
0.63 0.33 0.05
Matches are distributed among these distances:
19 15 0.56
20 12 0.44
ACGTcount: A:0.36, C:0.20, G:0.16, T:0.28
Consensus pattern (19 bp):
AAACTCTCTCAAGCGAGAT
Found at i:16720 original size:27 final size:27
Alignment explanation
Indices: 16682--16735 Score: 90
Period size: 27 Copynumber: 2.0 Consensus size: 27
16672 GTTTCGAGGG
*
16682 AAACTATCTCAAGAGAGACATAATCTT
1 AAACTATCTCAAGAGAGACAAAATCTT
*
16709 AAACTATCTCAAGCGAGACAAAATCTT
1 AAACTATCTCAAGAGAGACAAAATCTT
16736 CTGTTTCGAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.44, C:0.20, G:0.11, T:0.24
Consensus pattern (27 bp):
AAACTATCTCAAGAGAGACAAAATCTT
Found at i:16773 original size:66 final size:66
Alignment explanation
Indices: 16642--16775 Score: 196
Period size: 66 Copynumber: 2.0 Consensus size: 66
16632 TGTTTCGAAG
* * * * *
16642 TAAACTATATTAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGAGAGACATAATC
1 TAAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACAGAGAAAAAATC
16707 T
66 T
* * *
16708 TAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGAAAAAATC
1 TAAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACAGAGAAAAAATC
16773 T
66 T
16774 TA
1 TA
16776 TGTTTCAAAG
Statistics
Matches: 60, Mismatches: 8, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
66 60 1.00
ACGTcount: A:0.40, C:0.17, G:0.16, T:0.27
Consensus pattern (66 bp):
TAAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACAGAGAAAAAATC
T
Found at i:16789 original size:105 final size:105
Alignment explanation
Indices: 16604--16793 Score: 290
Period size: 105 Copynumber: 1.8 Consensus size: 105
16594 TATTTCAGGG
* * * * *
16604 AAACTATCTCAAGTGAGATAAAATCTTCTGTTTCGAAGTAAACTATATTAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAAGGAAACTATATCAACCGAGAAAAAATCT
* * *
16669 TTTGTTTCGAGGGAAACTATCTCAAGAGAGACATAATCTT
66 TATGTTTCAAAGGAAACTATCTCAAGAGAGACATAATCTT
* *
16709 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAAGGAAACTATATCAACCGAGAAAAAATCT
16774 TATGTTTCAAAGGAAACTAT
66 TATGTTTCAAAGGAAACTAT
16794 TTCAGGCGAG
Statistics
Matches: 75, Mismatches: 10, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
105 75 1.00
ACGTcount: A:0.39, C:0.16, G:0.16, T:0.28
Consensus pattern (105 bp):
AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAAGGAAACTATATCAACCGAGAAAAAATCT
TATGTTTCAAAGGAAACTATCTCAAGAGAGACATAATCTT
Found at i:16940 original size:20 final size:20
Alignment explanation
Indices: 16878--16945 Score: 50
Period size: 20 Copynumber: 3.5 Consensus size: 20
16868 CAATCTCAAG
16878 CGAGATAAAATCTTTTGTTT
1 CGAGATAAAATCTTTTGTTT
* * ****
16898 CGAG-GAAAA-CTCTCTCAAG
1 CGAGATAAAATCT-TTTGTTT
16917 CGAGATAAAATCTTTTGTTT
1 CGAGATAAAATCTTTTGTTT
*
16937 CGAGGTAAA
1 CGAGATAAA
16946 CTCTATCAAG
Statistics
Matches: 32, Mismatches: 13, Indels: 6
0.63 0.25 0.12
Matches are distributed among these distances:
18 2 0.06
19 10 0.31
20 18 0.56
21 2 0.06
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (20 bp):
CGAGATAAAATCTTTTGTTT
Found at i:17565 original size:194 final size:195
Alignment explanation
Indices: 16709--17567 Score: 965
Period size: 194 Copynumber: 4.4 Consensus size: 195
16699 ACATAATCTT
* * *
16709 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCT
* * * * * * * *
16774 TATGTTTCAAAGGAAACTATTTCAGGCGAGAAAAAATCTT-TTGCTTCGAGGGAAACCATCTCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTT-TTTCGAGGGAAACTATCTCAA
* * * * *
16838 GCGAGATAAAATATTATGTTTCAAGGGAAACAATCTCAAGCGAGATAAAATCTTTTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
16903 A
195 G
* * * * * *
16904 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGTAAACTCTATCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCT
* * * **
16969 TCTGTTTCGAGGGAAACTATCTTAAGAGAGATAAAATCTTCTGTTTT-GAGCGAAAAGAT-TCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCT-TTTTCGAGGGAAACTATCTCAA
* * * * * *
17032 GCGAAATAAAATCTTATGTTTCGACGGAAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
17097 G
195 G
* * * * * * *
17098 AAACTATCTTAAGCGAGACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATGT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCT
* ** * * * * *
17163 TCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATATTATATTTC-AAGAAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTTTTTCGAGGGAAACTATCTCAAG
* * * * * *
17227 CGAGAGAAAATCTTCTGTTTCGAAGGAAACTATCTCTAGTGAGAAAAAATATTCTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
17292 -AACATATCTCAAACAAGAGAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATC
* * * *
17356 TTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGGAAACTATATCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTTTTTCGAGGGAAACTATCTCAA
* * * * * * *
17420 GCAAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCTTTTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
17485 G
195 G
* * *
17486 AAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGTGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCT
*
17551 TATGTTTCGAGGGAAAC
66 TCTGTTTCGAGGGAAAC
17568 CATGTAACAC
Statistics
Matches: 550, Mismatches: 107, Indels: 15
0.82 0.16 0.02
Matches are distributed among these distances:
193 17 0.03
194 428 0.78
195 101 0.18
196 3 0.01
197 1 0.00
ACGTcount: A:0.37, C:0.16, G:0.18, T:0.28
Consensus pattern (195 bp):
AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCT
TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTTTTTCGAGGGAAACTATCTCAAG
CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
Found at i:18511 original size:23 final size:23
Alignment explanation
Indices: 18485--18548 Score: 101
Period size: 23 Copynumber: 2.8 Consensus size: 23
18475 CAGCTCATAT
18485 AATTGCACCGAAGTGCCACGTAG
1 AATTGCACCGAAGTGCCACGTAG
* *
18508 AATTGCACCGGAGTGCCGCGTAG
1 AATTGCACCGAAGTGCCACGTAG
*
18531 AATTGCACCGTAGTGCCA
1 AATTGCACCGAAGTGCCA
18549 TATAATAATG
Statistics
Matches: 37, Mismatches: 4, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
23 37 1.00
ACGTcount: A:0.27, C:0.27, G:0.28, T:0.19
Consensus pattern (23 bp):
AATTGCACCGAAGTGCCACGTAG
Found at i:18735 original size:103 final size:103
Alignment explanation
Indices: 18564--18884 Score: 579
Period size: 103 Copynumber: 3.1 Consensus size: 103
18554 TAATGTCCAT
* *
18564 AAGGACCACATATCATTCCTTAAGACTCATATAAATATACTAGGGATCAAGTATGTGTCTCACCA
1 AAGGACCACATATCATTCCTTAAGAATCATATACATATACTAGGGATCAAGTATGTGTCTCACCA
*
18629 GACTTCACACATGTTCCAAAGAATACATATATGTCTCG
66 GACTTCACACATGTTCCAAAGAATACATATATGTCCCG
18667 AAGGACCACATATCATTCCTTAAGAATCATATACATATACTAGGGATCAAGTATGTGTCTCACCA
1 AAGGACCACATATCATTCCTTAAGAATCATATACATATACTAGGGATCAAGTATGTGTCTCACCA
18732 GACTTCACACATGTTCCAAAGAATACATATATGTCCCG
66 GACTTCACACATGTTCCAAAGAATACATATATGTCCCG
* * *
18770 AAGGACCACATATCATTCCTTAAGAATCATATACATATGCCAAGGATCAAGTATGTGTCTCACCA
1 AAGGACCACATATCATTCCTTAAGAATCATATACATATACTAGGGATCAAGTATGTGTCTCACCA
*
18835 GACTTCATACATGTTCCAAAGAATACATATATGTCCCG
66 GACTTCACACATGTTCCAAAGAATACATATATGTCCCG
18873 AAGGACCACATA
1 AAGGACCACATA
18885 GACCCTCGAC
Statistics
Matches: 211, Mismatches: 7, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
103 211 1.00
ACGTcount: A:0.36, C:0.23, G:0.14, T:0.27
Consensus pattern (103 bp):
AAGGACCACATATCATTCCTTAAGAATCATATACATATACTAGGGATCAAGTATGTGTCTCACCA
GACTTCACACATGTTCCAAAGAATACATATATGTCCCG
Found at i:20117 original size:194 final size:195
Alignment explanation
Indices: 19780--39940 Score: 13233
Period size: 194 Copynumber: 103.3 Consensus size: 195
19770 GGGATGTTAC
* * * * *
19780 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
19845 TCTGTTT-AATGGGAAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAA
66 TCTGTTTCGA-GGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
*
19909 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
19974 G
195 G
** * * ** * * * *
19975 AAAAGAT-TCAAGCGAGATAAAATCTTCTTTTTCAACAGAAACTATCTAAATCGAGACAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
20039 TTTGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * ** * * * *
20104 CGAAACAAAATCTTCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
20168 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAAAT-
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAG-ATAAAATC
* * *** *
20232 TTCTATTTCGAGGG-AACAAATCTCAAAAAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCA
65 TTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCA
* * * * * * *
20296 AGCGAGATAAAATATT-TCGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCCTTTTTTTTTG
129 AGCGAGATAAAATCTTCT-GTTTCGAGGGAAACTATCTCAAGCGAGATAAAAT-CTTCTGTTTCG
20360 AGGG
192 AGGG
* * * * * * * *
20364 AAAATATATCAAGCAAGAAAAAATCTTATGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
20429 TCTGTTTCGAGGGAAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGGAA
66 TCTGTTTCGAGGG-AA--A---C-T----ATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAA
** * * ** * * * *
20494 AAGAT-TCAAACGAGATAAAATCTTCTTTTTCGACAGAAACTATCTAAAGCGAGACAAAATATTT
120 ACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTC
20558 TGTTTCGAGGG
185 TGTTTCGAGGG
* * * * * * *
20569 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** * * * * * *
20634 TCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGAAAACTAACTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * *
20698 CGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
20763 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAA--
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * * *
20825 TTCTGTTTTGAGGGAAATTATATCAAGCGAGACAAAATCTTTTTTTTTCGATGGAAACTATATCA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATC-TTCTGTTTCGAGGGAAACTATCTCA
* * * * * *
20890 AGCAAGAAAAAATCTTATGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAG
129 AGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG
20955 GG
194 GG
* **
20957 AAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGGAAAAGAT-TCAAGCG
1 -AA--A---C-T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCG
* ** * * * *
21021 AGATAAAATCTTCTTTTTCGACAGAAACTATCTAAAGCGAGACAAAATATTTTGTTTCGAGCGAA
55 AGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAA
* * * * * * *
21086 ACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCTTC
120 ACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTC
* * **
21151 TATTTCAAAAG
185 TGTTTCGAGGG
* * * * *
21162 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGAAAACTAACTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
21226 TCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG-AACATATCTCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAA
* * * * *
21290 ACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
21355 G
195 G
* * * * * * * * * *
21356 AAATTATATCAATCGAGACAAAATCTTTTTTTTTTCGAGGGAAACTATATCAATCAAGAAAAAAT
1 AAACTATCTCAAGCGAGATAAAATC--TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAAT
* * * * * *
21421 CTTATGTTTTGAGGGAAACTATCTAAAGCGTGAAAAAATCTTATGTTTCGAGGGAAACCATCTCA
64 CTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG-AA--A---C-
* ** **
21486 TGCGAATCTCAAGAGAGATAAAATCTTCAATTTCGAGGGAAAAGAT-TCAAGCGAGATAAAATCT
122 T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* **
21550 TCTTTTTCGACAG
183 TCTGTTTCGAGGG
* * * * *
21563 AAACTATCTAAAGCGAGA-CAAATATT-TGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * **
21626 TCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * *
21691 CGAGATAAAATATTCTATTTC-AAGAAAACTAACTCAAGTGAGATAAAATCTTCTGTTTCGAAGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
21755 AAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG-AACATATCTCAAACAAGAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * * * *
21819 TTCTGTTTCGAGTGAAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGGAAACTATATCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * *
21884 GCGAGACAAAATCTTTTTTTTTCGAGGGAAACTATATCAAGCAAGA-AAAATCTTATGTTTCGAG
130 GCGAGATAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG
21948 GG
194 GG
* * * * * *
21950 AAACTATCTAAAGCGTGAAAAAATCTCCTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
22015 TTTGTTTCGAGGGAAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACCATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * *
22080 CGAGATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GG
22144 G
195 G
* * *
22145 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * **
22210 TCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGGAAAAGAT-TCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * * *
22274 AGAGATAAAAACTTATTTTTCGACGGAAACTATCTCAAGCGAGACAAAATCTTTTGTTTTGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
22339 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** * * * * * *
22404 TCTATTTAGAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGAAAACTAACTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* *
22468 CGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAAAT-TTCTGTTTCGAGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAG-ATAAAATCTTCTGTTTCGAGG
22532 G
195 G
* * * * *
22533 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
22597 TTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGGAAACTATATCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * *
22661 GCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGTGACAAAATCTTCTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
22726 G
195 G
* * * *
22727 AAACCATCTCATGCGAGATAAAATCTTCTATTTCGAGGGAAACTATCTCAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * * *
22792 TATGTTTCGAGGGAAACCATATCAAGCGACATAAAATATTATGTTTCTAGGGAAACCATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * *
22857 CAAGATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGAGATAAAATCTTATGTTTTGAGG
131 CGAGATAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
22921 G
195 G
* * * *
22922 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCAAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
** * * * *
22987 TCTGTTTCGAGGGAAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGGAAAATATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * *
23051 CGAGATAAAATCTTTTGTTTCGAGAGAAACTATCTTAAGCGAGAAAAAATCTTCTATTTGGACGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * ** *
23116 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
23181 TCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCTTCTGTTT-GAAGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * *
23244 CGAGA-AAAATCTTCTATTTCGAGGG-AACATATCTCAAACAAGAGAAAATCTTCTATTTCGAGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
23307 G
195 G
* * * * * *
23308 AAACTATCTCAAGCGAGACAAAATATTTTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
23373 AT-TTTTTCGAGGGAAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTAACTAAA
66 -TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * * * *
23437 GCGTGACAAAATCTTATGTTTTGAGAGAAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
23502 G
195 G
* * * *
23503 AAAGTATCTCAAGCGAGA-AAAATCTTCTATTTCGAGGGAAACTATCTCAAGCGAGACAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
23567 TCTATTTAGAGGGAAACTATCTCATGTGAGACAAAATCTTCTATTTCTG-GAGAAACTATCTCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAA
* * * * * *
23631 GAGAGATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
23696 G
195 G
* **
23697 AAACTATCTCAAGCGAGGCT--AA--TTC----TC-----AAACTATCTCAAGCGAGGCAAAATC
1 AAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * *
23749 TACAGTTTCGAGGGAAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGGAAACTATCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * *
23814 GCGAGACAAAATCTTCTATTTCAAGAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
23878 G
195 G
* * * *
23879 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGAGAAAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
23944 TTTGTTTCGAGGGAAACTATCTC-A---AGACATAA---TC----T-----GAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * *
23993 CGAGACAAAATCTTCTGTTTTGAGGGAAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGA
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
24058 AAACTATTTCAAGCGAGAAAAAATATAT-TGCTTCAAGGGAAACCATCTCAAGCGAGATAAAATA
1 AAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * *
24122 TTATGTTTCAAGGGAAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* *
24187 GCGAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
24252 G
195 G
* * **
24253 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGCGAAAAGAT-TCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
24317 TCTATTTCGATGGAATCTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGGAAACCATCTCATG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * *
24382 CGAGATAAAATCTTCTGTTTCAAGGGAAACCATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
24447 AAACTCTCTCAAGCGAGATAAAATCTTTTATTTTGAGGGAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * **
24512 TCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTATGTTTCTAGCGAAAAGAT-TCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * *
24576 CGAAATAAAATCTTCTGTTTCGACGGAAACTATAC-CAAGCGAGACAAAATCTTTTGTTTCGAGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTAT-CTCAAGCGAGATAAAATCTTCTGTTTCGAGG
24640 G
195 G
* * *
24641 AAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGAGATAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATC
* * * *
24705 TTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCAAGGGAAACTATCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * ** * * *
24770 GAGAGATAAAATCTTCTGTTCCGAGGGAAAAGAT-TCAAGCGAGATAAAATCTTCTATTTTGACG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
24834 G
195 G
* * * * *
24835 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAGAAACTATCTTAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * **
24900 TCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * *
24965 CGAGATAAAATATTCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCATCTGTTTTGAAGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
25029 AAACTATCTCAAGCGAGA-AGAATCTTCTATTTCAAGGG-AACATAGCTCAAACAAGAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * * * *
25092 TTCTGTTTCGATGGAAACTATCTCAAGTGAGACAAAATATTCTGTTTTGAGGGAAACTATATCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * *
25157 GCGAGACAAAATCTT-TTTTTTGAGGGAAACTATCTCAAGCGAGAAAAAATCTTCTATTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
25221 C
195 G
* * * * * *
25222 AAACTATCTAAAGTGTGACAAAATCTTCTGTTTCGAGAGAAACTATCTCATGCGAGATAAAAT-T
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*
25286 TTTAGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
66 TCT-GTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * * * *
25351 GCGAGACAAAATATTCTATTTGGAGGGAAACTATCTCAAGTGAGA-AAAACCTTATATTTCTG-G
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAG
*
25414 AG
194 GG
* * * ** * * *
25416 AAACTATCTTAAGAGAGTTAAAAGATTCTATTTC-AGGGAAACTATATCAAGCGAGATAAAATCA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
25480 TCAGTTTCAAAGGAAACTCTCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * *
25545 CGAGGCT--AA--TTC----TC-----AAACTATCTCAAGCGAGGTAACATCTACAGTTTCGAGG
131 CGA-GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
25597 G
195 G
* * * * * *
25598 AAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGAGACAAAATCA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
25663 TAT-TTTCAAGAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * *
25726 CGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGAGAAAAAATCTTTTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
25791 AAACTATCTCAAGCGAGACATAA---TC----TC-----AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
25844 TCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGGAAACTATTTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * *
25909 CGAGAAAAAATCTTTTGCTTCGAGGGAAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
25974 AAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGGAAACTATCTAAAGCGAGATAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATC
* * *
26038 TTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* ** * * *
26103 GAGAGATAAAATCTTCTGTTTCGAGGGAAAAGAT-TCAAGCGAGATAAAATCTTATTTTTCGACG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
26167 G
195 G
* * * *
26168 AAACTATCTCAAGCGAGACAAAATCTTTTGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * **
26233 TCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * ** * *
26298 CGAGATAAAATATTATATTTC-AAGAAAACTATCTCAAGTGACTTAAAATATTCTATTTC-AGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26361 AAACTATCTGAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATATTAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
26426 TTTGTTTCGAGGGAAACTATCTCAAGCGTGACATAA---TC----TC-----AAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * *
26479 CGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCTTATGTTTCGAAGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
26544 AAACTATTTCAGGCGAGAAAAAATATT-TTTCTTCGAGGGAAACCATCTCAAGCGAGATAAAATA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGT-TTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * * *
26608 TTATGTTTCAAGGGAAACAATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGAAAACTCTCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * *
26673 GCGAGATAAAATCTTTTGTTTCGAGGTAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
26738 G
195 G
* * **
26739 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGCGAAAAGAT-TCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
26803 TCTGTTTCGACGGAAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGGAAACTATCTTAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * * **
26868 CGAGACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
26933 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
26997 TCTGTTTCGAAGGAAACTATCTCAAGTGAGAAAAAATATTCTGTTTCGAGGG-AACATATCTCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAA
* * * * * *
27061 ACAAGAGAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
27126 G
195 G
* * * * * * *
27127 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGGAAACTATATCAAGCAAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
27192 TCTGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGGAAACCATCTCATG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * *
27257 CGATATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGTGAGACAAAATCTTATGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **** ** *** ** * * * **
27322 AAACCA--TGAAAC-ACCCCAACCCGTATCTGACCCGGATTCGAATCCGAGGTGTCACATTGACC
1 AAACTATCTCAAGCGAGATAAAATC-T-TCTGTTTC-GA-GGGAA-ACTA--TCTCA-AGCGA--
** * * * * * * * * * *
27384 TTTAAAAACATGTACTTGTATAAAATAGTGAGTAAATTAAAATTTTATAAC-ATA-TAAATGACT
56 GATAAAATC-T-T-C-TGT-T----TCGAG-GGAAACT---ATCTCA-AGCGAGACAAAAT--CT
** * *** * * * * * * * * ***
27447 AAT-TTAC-ATAAAAGAC-ATTTTCATTATTACAAAACCAATCAGAGCATGTATCTTTC-ACTTA
105 TCTGTTTCGAGGGAA-ACTA-TCTCA--A--GCGAGA-TAA--A-ATC-T-TCTGTTTCGAGGGA
* * * * **
27508 TTATTTACATATAACTATTCGAAAC-ATTTATAAAA-CGGTTCATAGCTTAAACAATAG
158 --A---AC-TAT--C---TC-AAGCGA--GATAAAATC--TTC-T-G-TT--TCGAGGG
** * * * * * * * ** *
27565 ATTCT-TTTGAAAAC-ATGCCAACTAAAA-CTT-TATATACTA--AAATACCTAT-T-ATTC-AC
1 AAACTATCT-CAAGCGA-G---A-TAAAATCTTCTGT-TTCGAGGGAA-A-CTATCTCAAGCGAG
**** * * * * ** *** *** *
27621 ATCTTTTCTGATCTGACCTTTAGTAAGAAGAACTGACCTGTCTTGCTCCACATTGCTCTTTACTC
57 ATAAAATCT--TCTG---TTTCG-AGGGA-AACT-A--TCTCAAGCGAGACA-AAATC-TT-CTG
* * * * *** ***
27686 TTCTCGAAACCTACGTGTAAA-TCA-CTTACACGCTA-AGTCAAAGA-CTT-AGTGAGGCATATA
109 TT-TCGA-------G-GGAAACT-ATC-T-CAAGCGAGA-T-AAA-ATCTTCTGTTTCG-AGGGA
* * * ** * ** * ***
27746 AAC-ATAT-AAGGCAAACAGTAACTAATAATC-ATACCTAAAC
158 AACTATCTCAA-GC-GAGA-TAA--AATCTTCTGTTTCGAGGG
* ** * * * * * * * * * *
27786 AATTACTACTATCATTTC---ATACCACTCATACT-TTTAC-A-TGTAACAAATGT-ATGCATAC
1 AA--ACTA-TCTCA-AGCGAGATA-AAATC-TTCTGTTT-CGAGGGAAAC-TATCTCAAGC-GAG
** * ** * ** * ** ** ** *
27844 ATATATGTCATTATCATTC-A--TATCTCTTATCTCATGTTC-CTATGATCTCTTATGTCCATAT
57 ATA-AAATC-TTCTGTTTCGAGGGA-AAC-TATCTCAAG--CGAGACAAAATCTTCTGT---T-T
* * * * * * * * * * * * *
27905 C-A--TATAACATATAC-CATAACCA-ATTGCACATATAC-ATATC-A-TG--TC-ATGT-AACC
112 CGAGGGA-AAC-TAT-CTCA-AGCGAGA-T-AAAATCTTCTGTTTCGAGGGAAACTATCTCAAGC
* * * * * ***
27958 TATATATATATATATAC--TATC-ATAA
171 GAGATA-A-A-ATCTTCTGTTTCGAGGG
* * ** * * * * *** * *
27983 AACACGTACACCCAAGAAATTATATTATCATCTTCATTTCTTTCTTATTTTATCACTA--TC-AT
1 AA-AC-TA-TCTCAAGCGA-GATA--A-AATCTTC---TGTTTC-GA-GGGA-AACTATCTCAAG
* ** *** * * * ** ** * * ** * **
28045 TGATTCCTTTCATCATATGGTTT-TATAAGTTACCATTTGTA-C-A-ATCAATATCACCCATGAA
53 CGA--GATAAAATCTTCT-GTTTCGA-GGGAAACTATCTCAAGCGAGA-CAAAATC-TTC-TG--
* * * * * * * * * ** **
28106 ATTCCACAAGGAAACAAACATATTATCACATC-ACTTTATTAATAT-TATCTATTT-AATAG-CT
109 -TT--TCGAGG---GAAAC-TA-TCTCA-AGCGA---GA-TAAAATCT-TCTGTTTCGAGGGAAA
* * * * * * *
28167 CATGATACTCATGTGAGAACTAAAGATATGCGAGTACATAGAGGTTG
160 C-T-AT-CTCAAGCGAG-A-TAAA-ATCTTC-TGT--TTCGAGG--G
** * * * ** ** * *
28214 TTCACTAATGCTGTCACCA-C-AGCTCATATAAT-TG---C-ACCG-AAGT-GC-C-A-CGTAGA
1 -AAACT-AT-C--TCA--AGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCG-AG-
*** **** ** * * * * * * * * ** * * *
28267 ATTGCA-CCGGAGTGCCG-CGTAGAA-T-T-GC-ACCGTAGTGCCATATAATAATG-TCCATAAG
57 ATAAAATCTTCTGTTTCGAGGGA-AACTATCTCAAGCG-AG-ACAAAAT-CTTCTGTTTC-GAGG
* * ** ** * * * *
28325 GACCAC-ATATCATTC--CTTAAGAATCATATACAT-ATACTAGGGATCAAGTATGTGTCTC-A-
117 GA-AACTATCTCAAGCGAGATAA-AATC-T-T-C-TGTTTCGAGGGA--AACTA----TCTCAAG
* * * * * **
28384 CCAGACTTCACA-C--ATG-TTCCAAAG
170 CGAGA--TAAAATCTTCTGTTTCGAGGG
* **** * * * ** ***
28408 AATACATATATGTCCCGAAGGACCACATATCATTC-CTTAAGAATCATATACATATGC-CAA--G
1 AA-AC-TATCTCAAGCG-A-GA-TA-AAATC-TTCTGTTTCGAGGGA-A-AC-TAT-CTCAAGCG
* * * * * ** * * * * * * *
28469 -GATCAAGT-ATGTGTCTC-A-CCAGACT-TCATACATGTTCCA-A-AGAATACATATATTTCCC
55 AGATAAAATCTTCTGTTTCGAGGGAAACTATC-T-CAAG--CGAGACAAAAT-CTTCTGTTT--C
* * * ** * ** * ***
28527 GAAGGACCACATAGACCCTCGACTCTTG-GCATGCCAACTATACCCCTAGCTCTCATGACACATA
113 GAGGGA-AAC-T--A-TCTC-AAGC--GAG-AT---AA-AAT-CTTCT-G-TTTC--GAGGGA-A
* * ** * * * * *
28591 AC-ATGGTCATTATC--TTTTATATCCTTTTACATATTC-A-TG
159 ACTAT-CTCA--AGCGAGATAAAAT-CTTCT--GT-TTCGAGGG
* * * ***** * * *** * * * *
28630 TAACCATATCATATATTCATATAAGC-TCATGGTTTC-ATTCACATA-TATATGTAATCAAGTAT
1 AAACTATCTCA-AGCGAGATAAAATCTTC-T-GTTTCGAGGGA-A-ACTATCT-CAAGCGAG-A-
* ** *** ** * * * * *** * * *
28692 TTCAGGTCAATTCTCACAT-GAGTTCATATTCATAT-AAGCATAGGA-TTCACCCTCATGTATC-
58 -TAAAATC--TTCT-GTTTCGAG-GGAAACT-ATCTCAAGC-GA-GACAAAATCTTC-TGTTTCG
*** * * ** * * * * *
28753 ACATATACTTTCTCTTTCATATG-GCTCATAACATTTCTCATGTGTTC-A--TATAAC-ATGTAA
114 AGGGAAAC--TATC--TCA-A-GCG-AGATAAAATCT-TC-TGT-TTCGAGGGA-AACTATCTCA
* * * ***
28813 ATC-A-TTAACATCTTATCATGTTATC-ACAT
168 AGCGAGATAAAATC-T-TC-TGTT-TCGAGGG
* * * * * * *** * *
28842 AAACATATCATCTTACAATAC-ACACAAAA-C-AC---ATCAATACATA-TAT-TC-A-C-ATAT
1 AAAC---T-ATC-T-CAA-GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGAT
** * *** * * * * * * *
28896 ACGTATCATTTCAT-TATC--CTTATTATTATTCTTATCATC-A-CCATTAATCCTTTTGTTTTC
59 A-AAATC--TTC-TGTTTCGAGGGA-AACTA-TCTCA--AGCGAGACA-AAAT-CTTCTG-TTTC
** * * * * ** * * *** *
28956 ----TTACCATAT-TCATATC-A-ATAACACATATACTCATGCACATATAAATCATAACAATACA
113 GAGGGAAAC-TATCTCA-AGCGAGATAA-A-ATCTTCTGTTTC-GAGGGAAA-C-TATC--T-CA
*** * * * * * * *
29014 TA-CTTCTATGAATTCATGTTTTTCACTATTGG
168 -AGC-GAGATAAAATCTTCTGTTT--CGA-GGG
* * * * * * **** * * * * **
29046 AAA-TAGACT-TATC---A-CAAGTCTTAT-TTTCCCTTGAACCTCATAT--A-CTAGAGAAGGT
1 AAACTA-TCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACT-ATCTCAAGCGAGATAAAAT
* *** ***** * ** ** * * ** *
29101 GCACTCACCTT--AGCTTTGCT-T-TGATTCGA-TTATAATCCTTCAG-TT-GATTCGAAACGGG
64 -C-TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAAT-CTTCTGTTTCGA-GGGAAAC--T
* *** * * **** * * * * ** **** ** * * * *
29159 ATCACGTTCTATATCTTTTC-TCTTGGCTTCCACGTAAAGAAGAAGAAGAAAGGAGAAGAGCACT
123 ATCTCAAGCGAGATAAAATCTTC-T-GTTTCGAGGGAAACTATCTCAAGCGA-GATAAAATC-TT
29223 CTG----GA--G
184 CTGTTTCGAGGG
* * * * * * ** ** * **
29229 AATTCTCTCCCTTTCCA-CGTGTATATAACTCCATT-TTTTTTAAATGATCAAATGA-C-CAATT
1 AA-ACTAT--C--TCAAGCGAG-ATA-AAAT-C-TTCTGTTTCGAGGGA--AACT-ATCTCAAGC
* ** * ** * * *** * *** **
29290 TACCCTTTATTTCCTT-TAATAATTACTAAATAACCT-TCATCATATATATCCAATAATCATTGA
54 GA--GATAAAAT-CTTCT-GT--TT-CGAGGGAAACTATC-TCA-AGCGAGACAA-AATC-TT--
* ***** * * *
29353 ACTATTTC-ATTCTTCTACTTTAGTCATCAAATTCTGAAACTTTACAAATTGGTCACTAACCCAT
106 -CTGTTTCGA--GGGAAAC--TA-TC-TC-AA-GC-GAGA---TA-AAA----T--CT---TC-T
* * ** * * *
29417 AATTTGGGATGTTACAAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
147 -GTTT-CGA-G--GGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
29471 AAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGGAAACTATCTAAAGTGAGATAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATC
* * *
29535 TTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG--A--ATCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * ** * * * *
29596 GAGAGATAAAATCTTCTTTTTCGACAGAAACTATCTAAAGCGAGACAAAATATTTTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
29661 G
195 G
* * * * * * *
29662 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** * * * * * *
29727 TCTATTTCAAAAGAAACTATCTCAAGCGAGAGAAAATATTCTATTTC-AAGAAAACTAACTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * *
29791 CGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAATTTTCTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
29856 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * *
29920 TTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGGAAACTATATCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * * *
29985 GCAAGAAAAAAATCTTATGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCTCCTGTTTCGAG
130 GCGAG-ATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG
30050 GG
194 GG
* **
30052 AAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGGAAAAGAT-TCAAGCG
1 -AA--A---C-T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCG
* ** * * *
30116 AGATAAAATCTTCTTTTTTCGATAGAAACTATCTAAAGCGAGACAAAATATTTTGTTTCGAGGGA
55 AGATAAAATCTTC-TGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGA
* * * * * * *
30181 AACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCTT
119 AACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTT
* * **
30246 CTATTTCAAAAG
184 CTGTTTCGAGGG
* * * * * *
30258 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGAAAACTAACTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
30322 TCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG-AACATATCTCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAA
* * * * *
30386 ACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
30451 G
195 G
* * * * * * *
30452 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGGAAACTATATCAAGCAAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
30517 TATGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGGAAACCATCTCATG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* *
30582 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
30647 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
30712 TCTGTTT-AATGGGAAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGGAAGCTCTCTCAA
66 TCTGTTTCGA-GGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
*
30776 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
30841 G
195 G
** * * * *
30842 AAAAGAT-TCAAGCGAGATAAAATCTTATTTTTCGACGGAAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
30906 TTTGTTTCGAGGGAAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * ** * * * * * *
30971 CGAAACAAAATCTTCTATTTCAAAAGAAACTATGTCAAGCGAGATAAAATATTATATTTC-AAGA
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
31035 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTAAAGCGAGAAAAAATTT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
31100 TCTTTTTCGAGGG-TACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
66 TCTGTTTCGAGGGAAAC-TATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * * *
31164 GCGAGACAAAATATTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
31229 G
195 G
* * * * *
31230 AAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGTGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
31295 TCTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCTTCTATTTCGAGAGAAACTATCTCGAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * *
31360 CGAGAAAAAATCTTATGTTTTGAGGGAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCAAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
31425 AAACTATTTCAAGAGAGATAAAATCTTATGTTTCAAGGGAAAAGAT-TCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
31489 TCTGTTTTGACGGAAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAGAAACTATCTTAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * * **
31554 CGAGACAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
31619 AAACTATCTCAAGCGAGAT-AAATATTCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
31682 TCTGTTTTGAAGGAAACTATCTCAAGCGAGA-AAAATTTTCTATTTCGAGGG-AACATATCTCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAA
*** * * * * * * * * *
31745 AAAAAAGAAAATCTTCTATTTCGAGGGAAACTATCTCAAGCAAGACAAAATATTTTATTTTGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
31810 G
195 G
* * *
31811 AAACTATATCAAGCGAGACAAAATCTAT-T-TTTCGAGGGAAACTATCTCAAGCGAGAAAAAATC
1 AAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * *
31874 TTCTGTTTCGAGGGAAACTATCTAAAGCGTGACAAAATCTTCTGTTTTGAGAGAAACTATCTCAT
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * *
31939 GCGAGATAAAATTTTCAGTTTCGAGGGAAAGTATCTCAAGCGAGACAAAATCTTCTATTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
32004 A
195 G
* * * * * * *
32005 AAACTATCTCAAGCGAGACAAAATATTCTATTTAGAGGGAAACTATCTCATGTGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * ** ** *
32070 TCTATTTCTG-GAGAAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGGAAACTATCTCAA
66 TCTGTTTC-GAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * *
32133 GCGAGATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
32198 G
195 G
* **
32199 AAACTATCTCAAGCGAGGCT--AA--TTC----TC-----AAACTATCTCAAGCGAGGCAAAATC
1 AAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * *
32251 TACAGTTTTGAGGGAAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGGAAACTATCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
** * * * * *
32316 GCGAGGCAAAATCTTCTATTTCAAGAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
32380 G
195 G
* * * *
32381 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGAGAAAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*
32446 TTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAAA----C----T-----GAAACTATCTCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACA-AAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * *
32498 GCGAGACAAAATCTTCTGTTTCGAGAGAAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
32563 A
195 G
* * * * * *
32564 AAACTATTTCAAGAGAGAAAAAATCTAT-T-CTTCGAGGGAAACCATCTCAAGCGAGATAAAATA
1 AAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * * *
32627 TTATATTTCAAGGGAAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * *
32692 GCGAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGAG-TTAAATCTTCTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
32756 G
195 G
* * * ** *
32757 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTTGAGCGAAAAGAT-TCAAGCGAGATAAAATTT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
32821 TCTATTTCGATGGAAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGGAAACCATCTCATG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * *
32886 CGAGATAAAATCTTCTGTTTCAAGGGAAACCATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
32951 AAACTCTCTCAAGCGAGATAAAATCTTTTATTTTGAGGGAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * **
33016 TCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTATGTTTCTAGCGAAAAGAT-TCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * *
33080 CGAAATAAAATCTTCTGTTTCGACGGAAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
33145 AAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGGAAACTGTCTAAAGCGAGATAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATC
* * * *
33209 TT-TAGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTATGTTTCAAGGGAAACTATCTCA
65 TTCT-GTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCA
* * * ** * *
33273 AGAGAGATAAAATCTTATGTTTCGATGGAAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGAC
129 AGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG
*
33337 GA
194 GG
* * * * * * * * *
33339 AAAATATCTCAAGCGAGATAAAATATTTTTTTTCGAGAGAACCTATCTTAAGTGAGA-AATAATA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAA-AATC
* * * * * * **
33403 TTCTATTTGGACGGAAACTATCTCAAGAGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * * * *
33468 GCGAGATAAAATATTATATTTC-AAGAAAACTATATCAAGCGAGATAAAATCTTCTGTTTTGAAG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
33532 G
195 G
* * * * *
33533 AAACTATCTCAAGCGA-A-AAAATCTTCTATTTCGAGGG-AACATATCTCAAACAAGAGAAGATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * * *
33595 TTCGGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATATTCTGTTTTGAGGGAAACTATATCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * *
33660 GGGAGACAAAATCTTTTTTTTCGAGGGAAACTATCTCAAACGAGAAAAAATCTTCTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
33725 G
195 G
* *** * * * * *
33726 AAACTATCTAAAGTTTGACAAAATCTTCTGTTTCGAGAGAAACTATCTTATGCGAGATAAAATTT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*
33791 TCAGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * * * * * *
33856 CGAGACAAAATATTTTATTTGGAGGGAAACTATCTCAAGTGACACAAAATCTTATATTTCTG-GA
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGG
33920 G
195 G
* * * ** * * *
33921 AAACTATCTTAAGTGAGTTAAAAGATTCTATTTC-AGGGAAACTATATCAAGTGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
33985 TCAGTTTCAAAGGAAACTCTCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * *
34050 CGAGGCT--AA--TTC----TC-----AAACTATCTCAAGCGAGGTAACATCTACAGTTTCGAGG
131 CGA-GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
34102 G
195 G
* * * * * * *
34103 AAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCAAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * *
34168 TAT-TTTCAAGAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGGTAAACTATCTCACG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * *
34231 CGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGAGA-AAAATCTTTTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
34295 AAACTATCTCAAGCGAGACATAA---TC----TC-----AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
34348 TCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGGAAACTATTTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * *
34413 CGAGAAAAAATCTTTTGCTTCGAGGGAAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
34478 AAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
34543 TTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGTGGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* ** ** * * *
34608 AGAGATAAAATCTTCTGTTTCGAGCAAAAAGAT-TCAAGTGAGATAAAA-ATTCTGTTTCGACGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
34671 AAACTATCCCAATCGAGACAAAATCTTTTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
34736 TAT-TTCTCGAGGGAAACAATCTCAAGCGAGA-AAAATCTTATGTTTCGAGAGAAACCATCTCAA
66 TCTGTT-TCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * *
34799 GCGAGATAAAATATTATGTTTCGAGGGAAACTATCTCAAGTGAGATAAACTCTTCTGTTTC-ATG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-G
34863 GG
194 GG
* * * *
34865 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAATATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
34930 TTTTTTTCGAGGGAAACTATCTAAAGAGTGACAAAATCTTCTGTTTCGAGAGAAACTATCT-ATG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * *
34994 CGAGATAAACTTTTCAGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
35059 AAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGGGAAACTATATCAAGTGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * ** ** *
35124 TCTATTTCTG-GAGAAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGGAAACTATCTCAA
66 TCTGTTTC-GAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * *
35187 GCGAGATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
35252 G
195 G
* * **
35253 AAACTATTTCAAGCGAGGCT--AA--TTC----TC-----AAACTATCTCAAGCGAGGCAAAATC
1 AAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
*** * * * * *
35305 TAAAGTTTCTAGGGAAACTATCTCAAGTGAGATAAAATCTTCTATTTGGAGGGAAACTATCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * *
35370 GCGAGACAAAATCTTCTATTTCAAGAGAAACTATCTCAAACGAG-TCAAAATCTTTTGTTTCGAG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGAT-AAAATCTTCTGTTTCGAG
35434 GG
194 GG
* * * *
35436 AAACTATCTCAAGCGAGACATAA---TC----TC-----AAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
35489 TCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGGAAACTATTTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * *
35554 CGAGAAAAAATCTTTTACTTT-GAGGGAAACCATCTCAAGCGAGATAAAATATTATGTTTCCAGG
131 CGAGATAAAATCTTCT-GTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
35618 G
195 G
* * * *
35619 AAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGAAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
35684 TTTGTTTTGAGGGAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * * ** **
35749 AGAGATAAAATCTTCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATTTTCAATTTCGAAAG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
35814 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAGAAAACTATCTCAAGCAAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
35878 TCTGTTTCGAAGGAAACTATCTCAAGTGAGAAAAAATATTCTGTTTCGAGGG-AACATATCTCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAA
* * * * *
35942 ACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
36007 G
195 G
* * * * * *
36008 AAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGGAAACTATATCAAGCAAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
36072 TCTGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGGAAACCATCTCATG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* *
36137 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
36202 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
36267 TCTGTTT-AATGGGAAACTATCT-AGAGCAAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCA
66 TCTGTTTCGA-GGGAAACTATCTCA-AGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCA
*
36330 AGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAG
129 AGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG
36395 GG
194 GG
** * * * *
36397 AAAAGAT-TCAAGCGAGATAAAATCTTCTTTTTTGACGGAAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
36461 TTTGTTTCGAGGGAAACTATCTTAAGCAAGACAAAATCTTCTATTTTG-GCGGAAACTATCTCAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAG-GGAAACTATCTCAA
* * * * ** * ** *
36525 GC-AAACAAAATCTTCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATATTCAATTTC-AAG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
36588 A
195 G
* * *
36589 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTCAAGCGAGAAAAAAT-T
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
36653 T-TGTTTCGAGGG-AACATATCTCAAACAAGAGAAAATCTTCTATTTCGAGGGAAACTATCTCAA
66 TCTGTTTCGAGGGAAAC-TATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * * * * * *
36716 GCGAGACAAAATATTATATTTTGAGGGAAACTATATCATGCGAGACAAAATCTTTTTTTTTCGAG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC-TTCTGTTTCGAG
36781 GG
194 GG
* * * * * *
36783 AAACTATATCAAGCGAGAAAAAATATTCTGTTTCGAGGGAAAACTATCTAAAGCGTGACAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG-AAACTATCTCAAGCGAGATAAAATC
* * * * *
36848 TTCTGTTTCGAGAGAAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGGGAAACTATCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * * *
36913 GCGAGACAAAGTCTTCTGTTTCTAGGGAAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
36978 G
195 G
* * * * * * **
36979 AAACTATCTCAAGTGAGACAAAATCTTCTATTTCTG-GAGAAACTATCTTAAGCGAGTTAAAAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
37043 TTCTATTTC-AGGGAAACTATCTCAAGCGACATAAAATCTTCAGTTTC-AGAGGAAACTATCTCA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAG-GGAAACTATCTCA
* * * * * * *
37106 AACGAGAAAAAATCTTTTATTTCGAGAGAAATTATCTCAAGCGAGGCT--AA--TTC----TC--
129 AGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGA
37161 ---
193 GGG
** * * * *
37161 AAACTATCTCAAGCGAGGCAAAAT-TTACAGTTTCTAGGGAAACTATCTCAAGTGAGACAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTT-CTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * ** *
37225 TTCTATTTGGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTATTTTAAGAGAAACTATCTCAA
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * *
37290 GCGAGTTAAAATATTCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCTTATGTTTCGAAG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
37354 G
195 G
* * * * * * * *
37355 AATCTATTTTAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCTAGACATAA---
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
*
37417 TC----TC-----AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAC
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * * * * *
37473 CGAGACAAAATCTTATGTTTCAAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGA
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
37538 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * *
37603 TTTGTTTCGAGGAAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTTGAGGTAAACTCTCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * *
37668 CGAGATAAAATCTTCTGTTTCAAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGCG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * * *
37733 AAAAGAT-TAAAGCGAGATAAAATCTTCTATTTCGACGGAAACTATCCCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
37797 TTTGTTTCGAGGGAAACTAT-TTAAGCGAGACAAAATCTACTATTTGGACGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * ** * * * ***
37861 CGAAACAAAATCTTCTATTTCTAAAGAAACTATCTCAAGCGAGATAAAATATTATATTTC-AAAA
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * *
37925 AAACTATCTCAGGCGAGATAAAATCTTCTGTTTTGAAGGAAACTGTCTAAAGTGAGAAAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
37990 TCTGTTTCGATGG-AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
66 TCTGTTTCGAGGGAAAC-TATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * *
38054 GCGAGATAAAATATTCTGTTTTGAGGGAAACTATGTCAAGCGAGACAAAATCTT-T-TTTCCGAG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTT-CGAG
38117 GG
194 GG
* ** * * * * *
38119 AAACTATATCAAGAAAGAAAAAATCTTCTATTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
38184 TTTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGGAAATTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG-AA--A---C---
* * *
38249 TGAGGGAAACCATCTCAAGCGAGATAAAA-CATTATGTTTCAAGGGAAACCATCTCAAGCGAGAT
122 T----------ATCTCAAGCGAGATAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGAGAT
*
38313 AAAATCTTTTGTTTCGAGGG
176 AAAATCTTCTGTTTCGAGGG
* * * *
38333 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGAAAACTCTCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** **
38398 TCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGCAAAAAGAT-TCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * *
38462 CGAGATAAAATCTTCTGTTTCGACGGAAACTATCCCAATCGAGACAAAATCTTTTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
38527 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGGAAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * ** * * * * * *
38592 TCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGAAAACTAACTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * * *
38656 CGAGATAAAATCTTATGTTTGGAAGGAATCTATCTCAAGCGAGAAAAAATTTTCTGTTTCGAGGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * *
38721 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGAGAAACTATCTCAAGCCAGACAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * *
38785 TTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCCTT-T-TTTCCGAGGGAAACTATATC
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAAT-CTTCTGTTT-CGAGGGAAACTATCTC
* * * * * *
38848 AAGCGAGA-AAAATCTTCTGTTTCGATGGAAACTATCTAAAACGTGACAAAATCTTCTGTTTCAA
128 AAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA
*
38912 TGG
193 GGG
* * * * *
38915 AAACCATCTCATGCGAGATAAAATCTTCTATTT-GAGGGAAACTATCTCAAACGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
38979 TATGTTTCGAGGGAAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGGAAACCATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * *
39044 CGAGATAAACTCTTCTGTTTC-ATGGGAAACTATCTAAAGCGAGATAAAATCTTATATTTCGAGG
131 CGAGATAAAATCTTCTGTTTCGA-GGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
39108 G
195 G
* * * * * * *
39109 AAACTCTCCCAAGGGAGATAAAATCTCCTGTTTCAAGGGAAACTATCTCAAGAGAAATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
39174 TCTGTTTCGAGGGATAA-GAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGGAAAATATCTCAA
66 TCTGTTTCGAGGGA-AACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAA
* * * * * * * *
39237 GCGAGATAAAATCTTTTGTTTCGAGAGAATCTATCTTAAGCGAGAAAAAATCTTCTATTTGGACG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
39302 G
195 G
* * * ** *
39303 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
39368 TCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAAGGAAACTATCTCAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * * * *
39432 CGAGA-AAAATCTTCTATTTCGAGGG-AACATATCTCAAACAAGAGAAAATCTTCTATTTCGAGG
131 CGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
39495 G
195 G
* * * * * *
39496 AAACTATCTCAAGCGAAATAAAATATTCTGTTTTGATGGAAACTATATCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * *
39561 TTTTTTTCGAGGGAAACTATCTGAAGGGAGAAAAAACCTTCTGTTTCGAGGGAAACTA-CATAAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATC-TCAA
* * * * * *
39625 GCGTGAAAAAATCTTCTGTTTCGAGAGAAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
39690 G
195 G
* * * * *
39691 AAACTATCTCAAGCGAGACAAAACCTTCTATTTCGAGGGAAACTATCTCAAGCGAGACAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
39756 TCTATTTGGAGGGAAACTATCTCAAGTGAGACAAAATCTTCTATTTCTG-GAGAAACTATCTTAA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTC-GAGGGAAACTATCTCAA
* ** * * * *
39820 GCGAGTTAAAAGATTCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAG
130 GCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
39884 G
195 G
* * *
39885 AAACTATCTCAAGAGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAG
39941 GCTAATTCTC
Statistics
Matches: 15710, Mismatches: 3326, Indels: 1861
0.75 0.16 0.09
Matches are distributed among these distances:
178 65 0.00
179 77 0.00
180 32 0.00
181 161 0.01
182 703 0.04
183 895 0.06
184 15 0.00
185 10 0.00
186 13 0.00
187 8 0.00
188 8 0.00
189 10 0.00
190 31 0.00
191 215 0.01
192 592 0.04
193 1522 0.10
194 6266 0.40
195 2902 0.18
196 252 0.02
197 187 0.01
198 27 0.00
199 31 0.00
200 32 0.00
201 29 0.00
202 35 0.00
203 107 0.01
204 59 0.00
205 205 0.01
206 188 0.01
207 186 0.01
208 43 0.00
209 7 0.00
210 16 0.00
211 22 0.00
212 28 0.00
213 73 0.00
214 144 0.01
215 38 0.00
216 37 0.00
217 25 0.00
218 12 0.00
219 24 0.00
220 26 0.00
221 18 0.00
222 19 0.00
223 25 0.00
224 18 0.00
225 23 0.00
226 14 0.00
227 11 0.00
228 23 0.00
229 11 0.00
230 7 0.00
231 11 0.00
232 13 0.00
233 16 0.00
234 15 0.00
235 16 0.00
236 18 0.00
237 19 0.00
238 19 0.00
239 4 0.00
240 7 0.00
241 6 0.00
242 8 0.00
243 8 0.00
244 3 0.00
245 7 0.00
246 7 0.00
247 2 0.00
248 1 0.00
249 1 0.00
250 2 0.00
ACGTcount: A:0.37, C:0.17, G:0.17, T:0.29
Consensus pattern (195 bp):
AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
TCTGTTTCGAGGGAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
CGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
Found at i:23801 original size:105 final size:105
Alignment explanation
Indices: 23619--23818 Score: 301
Period size: 105 Copynumber: 1.9 Consensus size: 105
23609 ATTTCTGGAG
* *
23619 AAACTATCTCAAGAGAGATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
1 AAACTATCTCAAGAGAGACAAAATCTACAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
* *
23684 TTTGTTTCGAGGGAAACTATCTCAAGCGAGGCTAATTCTC
66 TCTATTTCGAGGGAAACTATCTCAAGCGAGGCTAATTCTC
* * * * * *
23724 AAACTATCTCAAGCGAGGCAAAATCTACAGTTTCGAGGGAAACTATCTCAAGTGAGACAAAATCT
1 AAACTATCTCAAGAGAGACAAAATCTACAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
*
23789 TCTATTTGGAGGGAAACTATCTCAAGCGAG
66 TCTATTTCGAGGGAAACTATCTCAAGCGAG
23819 ACAAAATCTT
Statistics
Matches: 84, Mismatches: 11, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
105 84 1.00
ACGTcount: A:0.38, C:0.18, G:0.19, T:0.25
Consensus pattern (105 bp):
AAACTATCTCAAGAGAGACAAAATCTACAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
TCTATTTCGAGGGAAACTATCTCAAGCGAGGCTAATTCTC
Found at i:24053 original size:101 final size:101
Alignment explanation
Indices: 23878--24070 Score: 296
Period size: 101 Copynumber: 1.9 Consensus size: 101
23868 CTATTTCAGG
* * *
23878 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGGAAACTATCTTAAGCGAGAAAAAATA
1 GAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAAGGAAACTATCTCAACCGAGAAAAAATA
* *
23943 TTTTGTTTCGAGGGAAACTATCTCAAGACATAATCT
66 TTATGTTTCGAGGAAAACTATCTCAAGACATAATCT
* * * *
23979 GAAACTATCTCAAGCGAGACAAAATCTTCTGTTTTGAGGGAAACTATCTCAACCGAGACAAAATC
1 GAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAAGGAAACTATCTCAACCGAGAAAAAATA
*
24044 TTATGTTTCGAGGAAAACTATTTCAAG
66 TTATGTTTCGAGGAAAACTATCTCAAG
24071 CGAGAAAAAA
Statistics
Matches: 82, Mismatches: 10, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
101 82 1.00
ACGTcount: A:0.38, C:0.17, G:0.17, T:0.28
Consensus pattern (101 bp):
GAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAAGGAAACTATCTCAACCGAGAAAAAATA
TTATGTTTCGAGGAAAACTATCTCAAGACATAATCT
Found at i:25829 original size:27 final size:27
Alignment explanation
Indices: 25791--25843 Score: 97
Period size: 27 Copynumber: 2.0 Consensus size: 27
25781 GTTTCGAGGG
*
25791 AAACTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCAAGCGAGACAAAATCTC
25818 AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCT
25844 TCTGTTTCGA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.43, C:0.25, G:0.11, T:0.21
Consensus pattern (27 bp):
AAACTATCTCAAGCGAGACAAAATCTC
Found at i:25858 original size:66 final size:66
Alignment explanation
Indices: 25752--25882 Score: 217
Period size: 66 Copynumber: 2.0 Consensus size: 66
25742 GTTTCGAAGG
* * * *
25752 AAACTATCTTAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAATCT
1 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
25817 C
66 C
*
25818 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
25883 TATGTTTCGA
Statistics
Matches: 60, Mismatches: 5, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
66 60 1.00
ACGTcount: A:0.38, C:0.21, G:0.16, T:0.25
Consensus pattern (66 bp):
AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
C
Found at i:26477 original size:27 final size:27
Alignment explanation
Indices: 26439--26491 Score: 88
Period size: 27 Copynumber: 2.0 Consensus size: 27
26429 GTTTCGAGGG
* *
26439 AAACTATCTCAAGCGTGACATAATCTC
1 AAACTATCTCAAGCGAGACAAAATCTC
26466 AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCT
26492 TCTGTTTCGA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
27 24 1.00
ACGTcount: A:0.42, C:0.25, G:0.11, T:0.23
Consensus pattern (27 bp):
AAACTATCTCAAGCGAGACAAAATCTC
Found at i:26506 original size:66 final size:66
Alignment explanation
Indices: 26400--26530 Score: 199
Period size: 66 Copynumber: 2.0 Consensus size: 66
26390 GTTTCGAAGG
* * * * *
26400 AAACTATATTAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGTGACATAATCT
1 AAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
26465 C
66 C
* *
26466 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
26531 TATGTTTCGA
Statistics
Matches: 58, Mismatches: 7, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
66 58 1.00
ACGTcount: A:0.38, C:0.20, G:0.16, T:0.26
Consensus pattern (66 bp):
AAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
C
Found at i:26697 original size:20 final size:20
Alignment explanation
Indices: 26635--26702 Score: 50
Period size: 20 Copynumber: 3.5 Consensus size: 20
26625 CAATCTCAAG
26635 CGAGATAAAATCTTTTGTTT
1 CGAGATAAAATCTTTTGTTT
* * ****
26655 CGAG-GAAAA-CTCTCTCAAG
1 CGAGATAAAATCT-TTTGTTT
26674 CGAGATAAAATCTTTTGTTT
1 CGAGATAAAATCTTTTGTTT
*
26694 CGAGGTAAA
1 CGAGATAAA
26703 CTCTCTCAAG
Statistics
Matches: 32, Mismatches: 13, Indels: 6
0.63 0.25 0.12
Matches are distributed among these distances:
18 2 0.06
19 10 0.31
20 18 0.56
21 2 0.06
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (20 bp):
CGAGATAAAATCTTTTGTTT
Found at i:26721 original size:19 final size:19
Alignment explanation
Indices: 26661--26721 Score: 50
Period size: 19 Copynumber: 3.2 Consensus size: 19
26651 GTTTCGAGGA
26661 AAACTCTCTCAAGCGAGAT
1 AAACTCTCTCAAGCGAGAT
* * **** *
26680 AAAATCTTTTGTTTCGAGGT
1 AAACTC-TCTCAAGCGAGAT
26700 AAACTCTCTCAAGCGAGAT
1 AAACTCTCTCAAGCGAGAT
26719 AAA
1 AAA
26722 ATCTTCTGTT
Statistics
Matches: 27, Mismatches: 14, Indels: 2
0.63 0.33 0.05
Matches are distributed among these distances:
19 15 0.56
20 12 0.44
ACGTcount: A:0.36, C:0.20, G:0.16, T:0.28
Consensus pattern (19 bp):
AAACTCTCTCAAGCGAGAT
Found at i:28269 original size:23 final size:23
Alignment explanation
Indices: 28243--28306 Score: 101
Period size: 23 Copynumber: 2.8 Consensus size: 23
28233 CAGCTCATAT
28243 AATTGCACCGAAGTGCCACGTAG
1 AATTGCACCGAAGTGCCACGTAG
* *
28266 AATTGCACCGGAGTGCCGCGTAG
1 AATTGCACCGAAGTGCCACGTAG
*
28289 AATTGCACCGTAGTGCCA
1 AATTGCACCGAAGTGCCA
28307 TATAATAATG
Statistics
Matches: 37, Mismatches: 4, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
23 37 1.00
ACGTcount: A:0.27, C:0.27, G:0.28, T:0.19
Consensus pattern (23 bp):
AATTGCACCGAAGTGCCACGTAG
Found at i:28493 original size:103 final size:103
Alignment explanation
Indices: 28322--28539 Score: 391
Period size: 103 Copynumber: 2.1 Consensus size: 103
28312 TAATGTCCAT
* *
28322 AAGGACCACATATCATTCCTTAAGAATCATATACATATACTAGGGATCAAGTATGTGTCTCACCA
1 AAGGACCACATATCATTCCTTAAGAATCATATACATATACCAAGGATCAAGTATGTGTCTCACCA
28387 GACTTCACACATGTTCCAAAGAATACATATATGTCCCG
66 GACTTCACACATGTTCCAAAGAATACATATATGTCCCG
*
28425 AAGGACCACATATCATTCCTTAAGAATCATATACATATGCCAAGGATCAAGTATGTGTCTCACCA
1 AAGGACCACATATCATTCCTTAAGAATCATATACATATACCAAGGATCAAGTATGTGTCTCACCA
* *
28490 GACTTCATACATGTTCCAAAGAATACATATATTTCCCG
66 GACTTCACACATGTTCCAAAGAATACATATATGTCCCG
28528 AAGGACCACATA
1 AAGGACCACATA
28540 GACCCTCGAC
Statistics
Matches: 110, Mismatches: 5, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
103 110 1.00
ACGTcount: A:0.37, C:0.23, G:0.13, T:0.27
Consensus pattern (103 bp):
AAGGACCACATATCATTCCTTAAGAATCATATACATATACCAAGGATCAAGTATGTGTCTCACCA
GACTTCACACATGTTCCAAAGAATACATATATGTCCCG
Found at i:29486 original size:39 final size:39
Alignment explanation
Indices: 29432--32476 Score: 3194
Period size: 39 Copynumber: 78.5 Consensus size: 39
29422 GGGATGTTAC
* * *
29432 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
29471 AAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * *
29510 AAACTATCTAAAGTGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
29549 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * **
29588 --A--ATCTCAAGAGAGATAAAATCTTCTTTTTCGACAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
29623 AAACTATCTAAAGCGAGACAAAATATTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
29662 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
29701 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
29740 AAACTATCTCAAGCGAGAGAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
29778 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
29817 AAACTATCTCAAGCGAGAAAAAATTTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
29856 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
29895 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
29934 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
29973 AAACTATATCAAGCAAGAAAAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAG-ATAAAATCTTCTGTTTCGAGGG
* * * *
30013 AAACTATCTAAAGCGTGAAAAAATCTCCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
30052 AAACCATCTCATGCGAATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 -AA--A---C-T----ATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * **
30102 AAAAGAT-TCAAGCGAGATAAAATCTTCTTTTTTCGATAG
1 AAACTATCTCAAGCGAGATAAAATCTTC-TGTTTCGAGGG
* * * *
30141 AAACTATCTAAAGCGAGACAAAATATTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
30180 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
30219 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
30258 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
30296 AAACTAACTCAAGCGAGATAAAATATTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
30335 AAACTATCTCAAGCGAGAAAAAATTTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
30374 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
30413 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
30452 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
30491 AAACTATATCAAGCAAGAAAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
30530 AAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
30569 AAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
30608 AAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
30647 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
30686 AAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* *
30725 AAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
30764 AAGCTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
30803 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
30842 AAAAGAT-TCAAGCGAGATAAAATCTTATTTTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
30880 AAACTATCTCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
30919 AAACTATCTTAAGCGAGACAAAATCTTCTATTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
30958 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
30997 AAACTATGTCAAGCGAGATAAAATATTATATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
31035 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
31074 AAACTATCTAAAGCGAGAAAAAATTTTCTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
31113 -TACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
31152 AAACTATCTCAAGCGAGACAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
31191 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
31230 AAACTATATCAAGCGAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
31269 AAACTATCTAAAGCGTGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
31308 AAACCATCTCATGCGAGATAAAATCTTCTATTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
31347 AAACTATCTCGAGCGAGAAAAAATCTTATGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
31386 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
31425 AAACTATTTCAAGAGAGATAAAATCTTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * *
31464 AAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
31502 AAAATATCTCAAGCGAGATAAAATCTTTTGTTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
31541 AAACTATCTTAAGCGAGACAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * **
31580 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
31619 AAACTATCTCAAGCGAGAT-AAATATTCTATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
31656 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
31695 AAACTATCTCAAGCGAGA-AAAATTTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*** * * *
31733 -AACATATCTCAAAAAAAAGAAAATCTTCTATTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
31772 AAACTATCTCAAGCAAGACAAAATATTTTATTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
31811 AAACTATATCAAGCGAGACAAAATCTAT-T-TTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGGG
*
31849 AAACTATCTCAAGCGAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
31888 AAACTATCTAAAGCGTGACAAAATCTTCTGTTTTGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
31927 AAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
31966 AAAGTATCTCAAGCGAGACAAAATCTTCTATTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
32005 AAACTATCTCAAGCGAGACAAAATATTCTATTTAGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
32044 AAACTATCTCATGTGAGACAAAATCTTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** *
32083 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
32121 AAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
32160 AAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
32199 AAACTATCTCAAGCGAGGCT--AA--TTC----TC-----
1 AAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGG
** * * *
32226 AAACTATCTCAAGCGAGGCAAAATCTACAGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
32265 AAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
32304 AAACTATCTCAAGCGAGGCAAAATCTTCTATTTCAAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
32343 AAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
32381 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
32420 AAACTATCTTAAGCGAGAAAAAATATTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
32459 AAACTATCTCAAGCGAGA
1 AAACTATCTCAAGCGAGA
32477 CATAAACTGA
Statistics
Matches: 2543, Mismatches: 404, Indels: 118
0.83 0.13 0.04
Matches are distributed among these distances:
26 1 0.00
27 16 0.01
28 2 0.00
30 2 0.00
32 2 0.00
34 1 0.00
35 29 0.01
36 2 0.00
37 27 0.01
38 340 0.13
39 2020 0.79
40 66 0.03
42 1 0.00
45 1 0.00
46 1 0.00
47 1 0.00
49 2 0.00
50 29 0.01
ACGTcount: A:0.38, C:0.16, G:0.18, T:0.28
Consensus pattern (39 bp):
AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
Found at i:32303 original size:105 final size:105
Alignment explanation
Indices: 32121--32322 Score: 305
Period size: 105 Copynumber: 1.9 Consensus size: 105
32111 TATTTCAGGG
* *
32121 AAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTACAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
* *
32186 TTTGTTTCGAGGGAAACTATCTCAAGCGAGGCTAATTCTC
66 TCTATTTCGAGGGAAACTATCTCAAGCGAGGCTAATTCTC
* ** * * *
32226 AAACTATCTCAAGCGAGGCAAAATCTACAGTTTTGAGGGAAACTATCTCAAGTGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTACAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
*
32291 TCTATTTGGAGGGAAACTATCTCAAGCGAGGC
66 TCTATTTCGAGGGAAACTATCTCAAGCGAGGC
32323 AAAATCTTCT
Statistics
Matches: 86, Mismatches: 11, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
105 86 1.00
ACGTcount: A:0.37, C:0.19, G:0.19, T:0.25
Consensus pattern (105 bp):
AAACTATCTCAAGCGAGACAAAATCTACAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
TCTATTTCGAGGGAAACTATCTCAAGCGAGGCTAATTCTC
Found at i:32528 original size:66 final size:66
Alignment explanation
Indices: 32419--32544 Score: 198
Period size: 66 Copynumber: 1.9 Consensus size: 66
32409 TGTTTCGAAG
* * * *
32419 GAAACTATCTTAAGCGAGAAAAAATATTTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAAAC
1 GAAACTATCTCAAGCGAGAAAAAATATTCTGTTTCGAGAGAAACTATCTCAACCGAGACATAAAC
32484 T
66 T
* *
32485 GAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGAGAAACTATCTCAACCGAGACA
1 GAAACTATCTCAAGCGAGAAAAAATATTCTGTTTCGAGAGAAACTATCTCAACCGAGACA
32545 AAATCTTATG
Statistics
Matches: 54, Mismatches: 6, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
66 54 1.00
ACGTcount: A:0.40, C:0.19, G:0.17, T:0.24
Consensus pattern (66 bp):
GAAACTATCTCAAGCGAGAAAAAATATTCTGTTTCGAGAGAAACTATCTCAACCGAGACATAAAC
T
Found at i:32542 original size:39 final size:39
Alignment explanation
Indices: 32485--35453 Score: 2999
Period size: 39 Copynumber: 77.5 Consensus size: 39
32475 GACATAAACT
* *
32485 GAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
32524 GAAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * *
32563 AAAACTATTTCAAGAGAGAAAAAATCTAT-T-CTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCT-TCTGTTTCGAGG
* * * * *
32601 GAAACCATCTCAAGCGAGATAAAATATTATATTTCAAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
32640 GAAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
32679 GAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
32718 GAAACTCTCTCAAGCGAG-TTAAATCTTCTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
32756 GAAACTATCTCAAGAGAGATAAAATCTTCTGTTTTGAGC
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
** * * *
32795 GAAAAGAT-TCAAGCGAGATAAAATTTTCTATTTCGATG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
32833 GAAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
32872 GAAACCATCTCATGCGAGATAAAATCTTCTGTTTCAAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
32911 GAAACCATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
32950 GAAACTCTCTCAAGCGAGATAAAATCTTTTATTTTGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
32989 GAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
33028 GAAACTATCTCAAGAGAGATAAAATCTTATGTTTCTAGC
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
** * *
33067 GAAAAGAT-TCAAGCGAAATAAAATCTTCTGTTTCGACG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
33105 GAAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
33144 GAAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GG
* *
33183 GAAACTGTCTAAAGCGAGATAAAATCTT-TAGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGG
* * *
33222 GAAACTCTCTCAAGCGAGATAAAATCTTATGTTTCAAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
33261 GAAACTATCTCAAGAGAGATAAAATCTTATGTTTCGATG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
** * *
33300 GAAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTTGACG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * * *
33338 AAAAATATCTCAAGCGAGATAAAATATTTTTTTTCGAGA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * * * *
33377 GAACCTATCTTAAGTGAGA-AATAATATTCTATTTGGACG
1 GAAACTATCTCAAGCGAGATAA-AATCTTCTGTTTCGAGG
* * * * **
33416 GAAACTATCTCAAGAGAAACAAAATCTTCTATTTCGAAA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
33455 GAAACTATCTCAAGCGAGATAAAATATTATATTTC-AAG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
33493 AAAACTATATCAAGCGAGATAAAATCTTCTGTTTTGAAG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
33532 GAAACTATCTCAAGCGA-A-AAAATCTTCTATTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * *
33569 G-AACATATCTCAAACAAGAGAAGATCTTCGGTTTCGAGG
1 GAAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
33608 GAAACTATCTCAAGCGAGACAAAATATTCTGTTTTGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * *
33647 GAAACTATATCAAGGGAGACAAAATCTTTTTTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
33686 GAAACTATCTCAAACGAGAAAAAATCTTCTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *** * *
33725 GAAACTATCTAAAGTTTGACAAAATCTTCTGTTTCGAGA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
33764 GAAACTATCTTATGCGAGATAAAATTTTCAGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
33803 GAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * *
33842 GAAACTATCTCAAGCGAGACAAAATATTTTATTTGGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * * *
33881 GAAACTATCTCAAGTGACACAAAATCTTATATTTCTG-GA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGG
* * * ** *
33920 GAAACTATCTTAAGTGAGTTAAAAGATTCTATTTC-AGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * *
33958 GAAACTATATCAAGTGAGATAAAATCTTCAGTTTCAAAG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
33997 GAAACTCTCTCAAGCGAGAAAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
34036 GAAACTATCTCAAGCGAGGCT--AA--TTC----TC----
1 GAAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGG
* * * *
34064 -AAACTATCTCAAGCGAGGTAACATCTACAGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
34102 GAAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * * *
34141 GAAACTATCTCAAGCAAAACAAAATCTTAT-TTTCAAGA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
34179 GAAACTATCTCAAGCGAGATAAAATATTCTATTTC-AGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
34217 TAAACTATCTCACGCGAGATAAAATCTTCTGTTTCGAAG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
34256 GAAACTATCTTAAGCGAGA-AAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
34294 GAAACTATCTCAAGCGAGACATAA---TC----TC----
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
34322 -AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
34360 GAAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
34399 GAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
34438 GAAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
34477 GAAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
34516 GAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
34555 GAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGTGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
34594 GAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGC
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* ** * * *
34633 AAAAAGAT-TCAAGTGAGATAAAA-ATTCTGTTTCGACG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
34670 GAAACTATCCCAATCGAGACAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
34709 GAAACCATCTCATGCGAGATAAAATCTTAT-TTCTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTT-TCGAGG
* * *
34748 GAAACAATCTCAAGCGAGA-AAAATCTTATGTTTCGAGA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
34786 GAAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
34825 GAAACTATCTCAAGTGAGATAAACTCTTCTGTTTC-ATGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GG
* *
34864 GAAACTATCTAAAGCGAGATAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
34903 GAAACTCTCTCAAGCGAGATAATATCTTTTTTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * *
34942 GAAACTATCTAAAGAGTGACAAAATCTTCTGTTTCGAGA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
34981 GAAACTATCT-ATGCGAGATAAACTTTTCAGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
*
35019 GAAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
35058 GAAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * * *
35097 GAAACTATATCAAGTGAGACAAAATCTTCTATTTCTG-GA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGG
* * ** *
35136 GAAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
35174 GAAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
35213 GAAACTATCTCAAGCGAGAAAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
35252 GAAACTATTTCAAGCGAGGCT--AA--TTC----TC----
1 GAAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGG
** *** *
35280 -AAACTATCTCAAGCGAGGCAAAATCTAAAGTTTCTAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * *
35318 GAAACTATCTCAAGTGAGATAAAATCTTCTATTTGGAGG
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* * * *
35357 GAAACTATCTCAAGCGAGACAAAATCTTCTATTTCAAGA
1 GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
* *
35396 GAAACTATCTCAAACGAG-TCAAAATCTTTTGTTTCGAGG
1 GAAACTATCTCAAGCGAGAT-AAAATCTTCTGTTTCGAGG
35435 GAAACTATCTCAAGCGAGA
1 GAAACTATCTCAAGCGAGA
35454 CATAATCTCA
Statistics
Matches: 2436, Mismatches: 417, Indels: 153
0.81 0.14 0.05
Matches are distributed among these distances:
26 3 0.00
27 53 0.02
28 3 0.00
30 5 0.00
32 6 0.00
34 6 0.00
36 8 0.00
37 44 0.02
38 444 0.18
39 1851 0.76
40 13 0.01
ACGTcount: A:0.36, C:0.17, G:0.18, T:0.28
Consensus pattern (39 bp):
GAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGG
Found at i:33734 original size:22 final size:21
Alignment explanation
Indices: 33709--33774 Score: 50
Period size: 22 Copynumber: 3.2 Consensus size: 21
33699 ACGAGAAAAA
33709 ATCTTCTGTTTCGAGGGAAACT
1 ATCTTCTGTTTCGA-GGAAACT
*** *
33731 ATCTAAAGTTT-GA-CAAA--
1 ATCTTCTGTTTCGAGGAAACT
33748 ATCTTCTGTTTCGAGAGAAACT
1 ATCTTCTGTTTCGAG-GAAACT
33770 ATCTT
1 ATCTT
33775 ATGCGAGATA
Statistics
Matches: 31, Mismatches: 8, Indels: 10
0.63 0.16 0.20
Matches are distributed among these distances:
17 8 0.26
18 2 0.06
19 3 0.10
20 3 0.10
21 2 0.06
22 13 0.42
ACGTcount: A:0.30, C:0.17, G:0.17, T:0.36
Consensus pattern (21 bp):
ATCTTCTGTTTCGAGGAAACT
Found at i:34333 original size:27 final size:27
Alignment explanation
Indices: 34295--34347 Score: 97
Period size: 27 Copynumber: 2.0 Consensus size: 27
34285 GTTTCGAGGG
*
34295 AAACTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCAAGCGAGACAAAATCTC
34322 AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCT
34348 TCTGTTTCGA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.43, C:0.25, G:0.11, T:0.21
Consensus pattern (27 bp):
AAACTATCTCAAGCGAGACAAAATCTC
Found at i:34362 original size:66 final size:65
Alignment explanation
Indices: 34257--34386 Score: 215
Period size: 66 Copynumber: 2.0 Consensus size: 65
34247 GTTTCGAAGG
* * * *
34257 AAACTATCTTAAGCGAGAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCAAGCGAGAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCTC
34322 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGA-AAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
34387 TATGTTTCGA
Statistics
Matches: 60, Mismatches: 4, Indels: 1
0.92 0.06 0.02
Matches are distributed among these distances:
65 17 0.28
66 43 0.72
ACGTcount: A:0.38, C:0.21, G:0.16, T:0.25
Consensus pattern (65 bp):
AAACTATCTCAAGCGAGAAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCTC
Found at i:35357 original size:105 final size:105
Alignment explanation
Indices: 35175--35374 Score: 292
Period size: 105 Copynumber: 1.9 Consensus size: 105
35165 TATTTCAGGG
* **
35175 AAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTAAAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
* * *
35240 TTTGTTTCGAGGGAAACTATTTCAAGCGAGGCTAATTCTC
66 TCTATTTCGAGGGAAACTATCTCAAGCGAGGCTAATTCTC
* * * * *
35280 AAACTATCTCAAGCGAGGCAAAATCTAAAGTTTCTAGGGAAACTATCTCAAGTGAGATAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTAAAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
*
35345 TCTATTTGGAGGGAAACTATCTCAAGCGAG
66 TCTATTTCGAGGGAAACTATCTCAAGCGAG
35375 ACAAAATCTT
Statistics
Matches: 83, Mismatches: 12, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
105 83 1.00
ACGTcount: A:0.38, C:0.17, G:0.18, T:0.27
Consensus pattern (105 bp):
AAACTATCTCAAGCGAGACAAAATCTAAAGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCT
TCTATTTCGAGGGAAACTATCTCAAGCGAGGCTAATTCTC
Found at i:35466 original size:27 final size:27
Alignment explanation
Indices: 35436--35488 Score: 88
Period size: 27 Copynumber: 2.0 Consensus size: 27
35426 GTTTCGAGGG
* *
35436 AAACTATCTCAAGCGAGACATAATCTC
1 AAACTATCTCAAGCGAAACAAAATCTC
35463 AAACTATCTCAAGCGAAACAAAATCT
1 AAACTATCTCAAGCGAAACAAAATCT
35489 TCTGTTTCGA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
27 24 1.00
ACGTcount: A:0.45, C:0.25, G:0.09, T:0.21
Consensus pattern (27 bp):
AAACTATCTCAAGCGAAACAAAATCTC
Found at i:35503 original size:66 final size:66
Alignment explanation
Indices: 35397--35527 Score: 208
Period size: 66 Copynumber: 2.0 Consensus size: 66
35387 ATTTCAAGAG
** * * *
35397 AAACTATCTCAAACGAGTCAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAATCT
1 AAACTATCTCAAACGAAACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
35462 C
66 C
*
35463 AAACTATCTCAAGCGAAACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAACGAAACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
35528 TATGTTTCGA
Statistics
Matches: 59, Mismatches: 6, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
66 59 1.00
ACGTcount: A:0.38, C:0.22, G:0.15, T:0.25
Consensus pattern (66 bp):
AAACTATCTCAAACGAAACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
C
Found at i:35506 original size:39 final size:39
Alignment explanation
Indices: 35463--38248 Score: 2851
Period size: 39 Copynumber: 72.3 Consensus size: 39
35453 ACATAATCTC
* *
35463 AAACTATCTCAAGCGAAACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
35502 AAACTATCTCAACCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
35541 AAACTATTTCAAGCGAGAAAAAATCTTTTACTTT-GAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGGG
* * * *
35580 AAACCATCTCAAGCGAGATAAAATATTATGTTTCCAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
35619 AAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
35658 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
35697 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
35736 AAACTATCTCAAGAGAGATAAAATCTTCTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * ** **
35775 AAACTATCTCAAGCGAAACAAAATTTTCAATTTCGAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
35814 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
35852 AAACTATCTCAAGCAAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
35891 AAACTATCTCAAGTGAGAAAAAATATTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
35930 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
35969 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
36008 AAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
36046 AAACTATATCAAGCAAGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
36085 AAACTATCTAAAGCGTGAAAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
36124 AAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
36163 AAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
36202 AAACCATCTCAAGCGAGATAAAATATTATGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
36241 AAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* *
36280 AAACTATCT-AGAGCAAGATAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCA-AGCGAGATAAAATCTTCTGTTTCGAGGG
*
36319 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
36358 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
36397 AAAAGAT-TCAAGCGAGATAAAATCTTCTTTTTTGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
36435 AAACTATCTCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
36474 AAACTATCTTAAGCAAGACAAAATCTTCTATTTTG-GCGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG-GG
* * * * **
36513 AAACTATCTCAAGC-AAACAAAATCTTCTATTTCAAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* ** * *
36551 AAACTATCTCAAGCGAGATAAAATATTCAATTTC-AAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
36589 AAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
36628 AAACTATCTCAAGCGAGAAAAAAT-TT-TGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
36665 -AACATATCTCAAACAAGAGAAAATCTTCTATTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
36704 AAACTATCTCAAGCGAGACAAAATATTATATTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
36743 AAACTATATCATGCGAGACAAAATCTTTTTTTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATC-TTCTGTTTCGAGGG
* * *
36783 AAACTATATCAAGCGAGAAAAAATATTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
36822 AAAACTATCTAAAGCGTGACAAAATCTTCTGTTTCGAGAG
1 -AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
36862 AAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
36901 AAACTATCTCAAGCGAGACAAAGTCTTCTGTTTCTAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
36940 AAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
36979 AAACTATCTCAAGTGAGACAAAATCTTCTATTTCTG-GAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGG
* * ** *
37018 AAACTATCTTAAGCGAGTTAAAAGATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
37056 AAACTATCTCAAGCGACATAAAATCTTCAGTTTC-AGAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG-GG
* * * * *
37095 AAACTATCTCAAACGAGAAAAAATCTTTTATTTCGAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
37134 AAATTATCTCAAGCGAGGCT--AA--TTC----TC-----
1 AAACTATCTCAAGCGA-GATAAAATCTTCTGTTTCGAGGG
** * * * *
37161 AAACTATCTCAAGCGAGGCAAAATTTACAGTTTCTAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
37200 AAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * ** *
37239 AAACTATCTCAAGCGAGACAAAATCTTCTATTTTAAGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
37278 AAACTATCTCAAGCGAGTTAAAATATTCTATTTC-AGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
37316 AAACTATCTCAAGCGAGATAAAATCTTATGTTTCGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
37355 AATCTATTTTAAGCGAGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
37394 AAACTATCTCAAGCTAGACATAA---TC----TC-----
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
37421 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
37460 AAACTATCTCAACCGAGACAAAATCTTATGTTTCAAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
37499 AAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
37538 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
37577 AAACCATCTCAAGCGAGATAAAATCTTTTGTTTCGAGGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
37616 AAACTCTCTCAAGCGAGATAAAATCTTTTGTTTTGAGGT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
37655 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCAAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
37694 AAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGCG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * *
37733 AAAAGAT-TAAAGCGAGATAAAATCTTCTATTTCGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
37771 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
37810 AAACTAT-TTAAGCGAGACAAAATCTACTATTTGGACGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * **
37848 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCTAAAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * ***
37887 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAAA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
37925 AAACTATCTCAGGCGAGATAAAATCTTCTGTTTTGAAGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
37964 AAACTGTCTAAAGTGAGAAAAAATATTCTGTTTCGATGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
38003 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGG
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
38042 AAACTATCTCAAGCGAGATAAAATATTCTGTTTTGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
38081 AAACTATGTCAAGCGAGACAAAATCTT-T-TTTCCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTT-CGAGGG
* ** * *
38119 AAACTATATCAAGAAAGAAAAAATCTTCTATTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
38158 AAACTATCTAAAGCGTGAAAAAATCTTTTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
38197 AAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
*
38236 AAATTATCTCAAG
1 AAACTATCTCAAG
38249 TGAGGGAAAC
Statistics
Matches: 2308, Mismatches: 379, Indels: 120
0.82 0.14 0.04
Matches are distributed among these distances:
26 1 0.00
27 36 0.02
28 2 0.00
30 4 0.00
32 4 0.00
34 4 0.00
36 6 0.00
37 30 0.01
38 367 0.16
39 1767 0.77
40 87 0.04
ACGTcount: A:0.38, C:0.17, G:0.18, T:0.28
Consensus pattern (39 bp):
AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
Found at i:35540 original size:105 final size:105
Alignment explanation
Indices: 35358--35558 Score: 330
Period size: 105 Copynumber: 1.9 Consensus size: 105
35348 ATTTGGAGGG
* *
35358 AAACTATCTCAAGCGAGACAAAATCTTCTATTTCAAGAGAAACTATCTCAAACGAGTCAAAATCT
1 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAGAGAAACTATCTCAAACGAGACAAAATCT
*
35423 TTTGTTTCGAGGGAAACTATCTCAAGCGAGACATAATCTC
66 TATGTTTCGAGGGAAACTATCTCAAGCGAGACATAATCTC
* * * *
35463 AAACTATCTCAAGCGAAACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAGAGAAACTATCTCAAACGAGACAAAATCT
*
35528 TATGTTTCGAGGGAAACTATTTCAAGCGAGA
66 TATGTTTCGAGGGAAACTATCTCAAGCGAGA
35559 AAAAATCTTT
Statistics
Matches: 88, Mismatches: 8, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
105 88 1.00
ACGTcount: A:0.38, C:0.20, G:0.16, T:0.26
Consensus pattern (105 bp):
AAACTATCTCAAGCGAAACAAAATCTTCTATTTCAAGAGAAACTATCTCAAACGAGACAAAATCT
TATGTTTCGAGGGAAACTATCTCAAGCGAGACATAATCTC
Found at i:35674 original size:117 final size:117
Alignment explanation
Indices: 35463--39940 Score: 3367
Period size: 117 Copynumber: 38.5 Consensus size: 117
35453 ACATAATCTC
* * * *
35463 AAACTATCTCAAGCGAAACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
35528 TATGTTTCGAGGGAAACTATTTCAAGCGAGAAAAAATCTTTTACTTT-GAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCT-GTTTCGAGGG
* * * * *
35580 AAACCATCTCAAGCGAGATAAAATATTATGTTTCCAGGGAAACCATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
35645 TTTGTTTCGAGGAAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTTGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* *
35697 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * ** **
35762 TCTATTTGGACGGAAACTATCTCAAGCGAAACAAAATTTTCAATTTCGAAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
35814 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAGAAAACTATCTCAAGCAAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
35878 TCTGTTTCGAAGGAAACTATCTCAAGTGAGAAAAAATATTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
35930 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
35994 TTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCTT-TTTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
36046 AAACTATATCAAGCAAGAAAAAATCTTCTGTTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* *
36111 TCTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
36163 AAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
36228 TATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCTTCTGTTT-AATGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * *
36280 AAACTATCT-AGAGCAAGATAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATC
1 AAACTATCTCA-AGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
*
36344 TTCTGTTTCGAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
** * * * *
36397 AAAAGAT-TCAAGCGAGATAAAATCTTCTTTTTTGACGGAAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
36461 TTTGTTTCGAGGGAAACTATCTTAAGCAAGACAAAATCTTCTATTTTG-GCGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG-GG
* * * * ** *
36513 AAACTATCTCAAGC-AAACAAAATCTTCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
** * * * *
36577 TCAATTTC-AAGAAAACTAACTCAAGCGAGATAAAATCTTCTGTTTCGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
36628 AAACTATCTCAAGCGAGAAAAAAT-TT-TGTTTCGAGGG-AACATATCTCAAACAAGAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * * * * *
36690 TTCTATTTCGAGGGAAACTATCTCAAGCGAGACAAAATATTATATTTTGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * *
36743 AAACTATATCATGCGAGACAAAATCTTTTTTTTTCGAGGGAAACTATATCAAGCGAGAAAAAATA
1 AAACTATCTCAAGCGAGATAAAATC-TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
36808 TTCTGTTTCGAGGGAAAACTATCTAAAGCGTGACAAAATCTTCTGTTTCGAGAG
65 TTCTGTTTCGAGGG-AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
36862 AAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGGGAAACTATCTCAAGCGAGACAAAGTCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
36927 TCTGTTTCTAGGGAAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * **
36979 AAACTATCTCAAGTGAGACAAAATCTTCTATTTCTG-GAGAAACTATCTTAAGCGAGTTAAAAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATC
* * *
37043 TTCTATTTC-AGGGAAACTATCTCAAGCGACATAAAATCTTCAGTTTC-AGAGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG-GG
* * * * * * *
37095 AAACTATCTCAAACGAGAAAAAATCTTTTATTTCGAGAGAAATTATCTCAAGCGAGGCT--AA--
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGA-GATAAAATC
** * *
37156 TTC----TC-----AAACTATCTCAAGCGAGGCAAAAT-TTACAGTTTCTAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTT-CTGTTTCGAGGG
* * * * *
37200 AAACTATCTCAAGTGAGACAAAATCTTCTATTTGGAGGGAAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* ** * * * *
37265 TCTATTTTAAGAGAAACTATCTCAAGCGAGTTAAAATATTCTATTTC-AGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * *
37316 AAACTATCTCAAGCGAGATAAAATCTTATGTTTCGAAGGAATCTATTTTAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
37381 TTTGTTTCGAGGGAAACTATCTCAAGCTAGACATAA---TC----TC-----
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
37421 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * *
37486 TATGTTTCAAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGA
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
37538 AAACCATCTCAAGCGAGATAAAATATTATGTTTCAAGGGAAACCATCTCAAGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * *
37603 TTTGTTTCGAGGAAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTTGAGGT
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
37655 AAACTCTCTCAAGCGAGATAAAATCTTCTGTTTCAAGGGAAACTATCTCAAGAGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* ** * * *
37720 TCTGTTTCGAGCGAAAAGAT-TAAAGCGAGATAAAATCTTCTATTTCGACGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
37771 AAACTATCCCAAGCGAGACAAAATCTTTTGTTTCGAGGGAAACTAT-TTAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * * **
37835 ACTATTTGGACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTCTAAAG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *** *
37887 AAACTATCTCAAGCGAGATAAAATATTATATTTC-AAAAAAACTATCTCAGGCGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * * * * *
37951 TCTGTTTTGAAGGAAACTGTCTAAAGTGAGAAAAAATATTCTGTTTCGATGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
38003 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * *
38067 TTCTGTTTTGAGGGAAACTATGTCAAGCGAGACAAAATCTT-T-TTTCCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTT-CGAGGG
* ** * * * * *
38119 AAACTATATCAAGAAAGAAAAAATCTTCTATTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
38184 TTTGTTTCGAGGGAAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * ** * * **** ** *
38236 AAATTATCTCAAGTGAG-GGAAACCATCTCAAGCGAGATAAAACATTATGTTTCAAG-G-GA-AA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAG-GGAAAC--TA--TCTCAAGCGAGATAA
* * ** *** ** * **** **
38297 CCATC-TCAAG---CGAGATAAA--ATCTTTTGTTTCGAGGGAAACTC-TCTCAAGCGAGAT
61 -AATCTTC-TGTTTCGAGGGAAACTATCTCAAG---CGAGATAAAATCTTCTGTTTCGAGGG
*** * **** ** **** **
38352 AAA--ATCTTTTGTTTCGAG-GAAAA-CTCTCTCAAGCGAGATAAAATCT-TCTGTTTCGAG-GG
1 AAACTATCTCAAG---CGAGATAAAATCT-TCTGTTTCGAG-GGAAA-CTATCTCAAGCGAGATA
***** ** **** ** * **
38411 AAA-CTATCTCAAGAGAGATAAAATCT-TCTGTTTCGAGCA-AAAAGATTCAAG---CGAGATA
60 AAATCT-TCTGTTTCGAG-GGAAA-CTATCTCAAGCGAG-ATAAAATCTTC-TGTTTCGAG-GG
**** * **** ** *** **
38469 AAATCT-TCTGTTTCGACG--GAAA-CTATCCCAATCGAGACAAA--ATCTTTTGTTTCGAG-GG
1 AAA-CTATCTCAAGCGA-GATAAAATCT-TCTGTTTCGAGGGAAACTATCTCAAG---CGAGATA
** ** * **** ** **** ***
38527 AAA-CTATCT-TAAGCGAGACAAA--ATCTTCTATTTTGACGGAAA-CTATCTCAAGCGAAACA
60 AAATCT-TCTGT-TTCGAGGGAAACTATC-TCAAGCGAGA-TAAAATCT-TCTGTTTCG-AGGG
* * ** * * ** * * *
38586 AAATCTTCTATTTCAAAAGAAACTATCTCAAGCGAGATAAAATAT-TCTATTTCAAGAAAACTAA
1 AAA----CTATCTC--AAG---CGAGAT-AA---A-AT---CT-TCTGT-TTCGAGGGAAACTAT
* * * * * *
38650 CTCAAGCGAGATAAAATCTTATGTTTGGAAGGAATCTATCTCAAGCGAGAAAAAATTTTCTGTTT
47 CTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTT
38715 CGAGGG
112 CGAGGG
* * * * * * *
38721 -AACATATCTCAAACAAGAGAAAATCTTCTGTTTCGAGAGAAACTATCTCAAGCCAGACAAAATA
1 AAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * *
38785 TTCTGTTTTGAGGGAAACTATATCAAGCGAGACAAAATCCTT-T-TTTCCGAGGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAAT-CTTCTGTTT-CGAGGG
* * * * * *
38838 AAACTATATCAAGCGAGA-AAAATCTTCTGTTTCGATGGAAACTATCTAAAACGTGACAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
38902 TCTGTTTCAATGGAAACCATCTCATGCGAGATAAAATCTTCTATTT-GAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
38953 AAACTATCTCAAACGAGAAAAAATCTTATGTTTCGAGGGAAACCATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * *
39018 TATGTTTCGAGGGAAACCATCTCAAGCGAGATAAACTCTTCTGTTTC-ATGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGA-GGG
* * * * * *
39070 AAACTATCTAAAGCGAGATAAAATCTTATATTTCGAGGGAAACTCTCCCAAGGGAGATAAAATCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
39135 CCTGTTTCAAGGGAAACTATCTCAAGAGAAATAAAATCTTCTGTTTCGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
39187 ATAA-GAT-TCAAGCGAGATAAAATCTTCTGTTTTGACGGAAAATATCTCAAGCGAGATAAAATC
1 A-AACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATC
* * * * * * * *
39250 TTTTGTTTCGAGAGAATCTATCTTAAGCGAGAAAAAATCTTCTATTTGGACGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * ** *
39303 AAACTATCTCAAGCGAAACAAAATCTTCTATTTCGAAAGAAACTATCTCAAGCGAGATAAAATAT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
39368 TCTATTTC-AAGAAAACTATCTCAAGCGAGATAAAATCTTCTGTTTTGAAGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * *
39419 AAACTATCTCAAGCGAGA-AAAATCTTCTATTTCGAGGG-AACATATCTCAAACAAGAGAAAATC
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAAC-TATCTCAAGCGAGATAAAATC
* * * * *
39482 TTCTATTTCGAGGGAAACTATCTCAAGCGAAATAAAATATTCTGTTTTGATGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * * *
39535 AAACTATATCAAGCGAGACAAAATCTTTTTTTTCGAGGGAAACTATCTGAAGGGAGAAAAAACCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * *
39600 TCTGTTTCGAGGGAAACTA-CATAAAGCGTGAAAAAATCTTCTGTTTCGAGAG
66 TCTGTTTCGAGGGAAACTATC-TCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * *
39652 AAACTATCTCATGCGAGATAAAATTTTCAGTTTCGAGGGAAACTATCTCAAGCGAGACAAAACCT
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
* * * * *
39717 TCTATTTCGAGGGAAACTATCTCAAGCGAGACAAAATATTCTATTTGGAGGG
66 TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * * * * * **
39769 AAACTATCTCAAGTGAGACAAAATCTTCTATTTCTG-GAGAAACTATCTTAAGCGAGTTAAAAGA
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTC-GAGGGAAACTATCTCAAGCGAGATAAAATC
* * * *
39833 TTCTATTTC-AGGGAAACTATCTCAAGCGAGATAAAATCTTCAGTTTCAAAGG
65 TTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
* * *
39885 AAACTATCTCAAGAGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGCGAG
1 AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAG
39941 GCTAATTCTC
Statistics
Matches: 3484, Mismatches: 717, Indels: 321
0.77 0.16 0.07
Matches are distributed among these distances:
104 3 0.00
105 164 0.05
106 4 0.00
108 4 0.00
109 4 0.00
112 3 0.00
113 19 0.01
114 53 0.02
115 241 0.07
116 1305 0.37
117 1412 0.41
118 117 0.03
119 70 0.02
120 9 0.00
121 9 0.00
122 1 0.00
125 2 0.00
126 4 0.00
128 1 0.00
129 2 0.00
130 1 0.00
131 6 0.00
132 1 0.00
134 2 0.00
135 6 0.00
136 25 0.01
137 9 0.00
138 7 0.00
ACGTcount: A:0.38, C:0.17, G:0.18, T:0.28
Consensus pattern (117 bp):
AAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCT
TCTGTTTCGAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTCGAGGG
Found at i:37247 original size:105 final size:105
Alignment explanation
Indices: 37056--37255 Score: 278
Period size: 105 Copynumber: 1.9 Consensus size: 105
37046 TATTTCAGGG
*
37056 AAACTATCTCAAGCGACATAAAATCTTCAGTTTCAGAGGAAACTATCTCAAACGAGAAAAAATCT
1 AAACTATCTCAAGCGACACAAAATCTTCAGTTTCAGAGGAAACTATCTCAAACGAGAAAAAATCT
* *
37121 TTTATTTCGAGAGAAATTATCTCAAGCGAGGCTAATTCTC
66 TCTATTTCGAGAGAAACTATCTCAAGCGAGGCTAATTCTC
** ** *
37161 AAACTATCTCAAGCGAGGCAAAAT-TTACAGTTTCTAG-GGAAACTATCTCAAGTGAGACAAAAT
1 AAACTATCTCAAGCGACACAAAATCTT-CAGTTTC-AGAGGAAACTATCTCAAACGAGAAAAAAT
* *
37224 CTTCTATTTGGAGGGAAACTATCTCAAGCGAG
64 CTTCTATTTCGAGAGAAACTATCTCAAGCGAG
37256 ACAAAATCTT
Statistics
Matches: 83, Mismatches: 10, Indels: 4
0.86 0.10 0.04
Matches are distributed among these distances:
104 2 0.02
105 79 0.95
106 2 0.02
ACGTcount: A:0.38, C:0.18, G:0.17, T:0.27
Consensus pattern (105 bp):
AAACTATCTCAAGCGACACAAAATCTTCAGTTTCAGAGGAAACTATCTCAAACGAGAAAAAATCT
TCTATTTCGAGAGAAACTATCTCAAGCGAGGCTAATTCTC
Found at i:37432 original size:27 final size:27
Alignment explanation
Indices: 37394--37446 Score: 88
Period size: 27 Copynumber: 2.0 Consensus size: 27
37384 GTTTCGAGGG
* *
37394 AAACTATCTCAAGCTAGACATAATCTC
1 AAACTATCTCAAGCGAGACAAAATCTC
37421 AAACTATCTCAAGCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCT
37447 TCTGTTTCGA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
27 24 1.00
ACGTcount: A:0.43, C:0.25, G:0.09, T:0.23
Consensus pattern (27 bp):
AAACTATCTCAAGCGAGACAAAATCTC
Found at i:37524 original size:105 final size:105
Alignment explanation
Indices: 37316--37641 Score: 287
Period size: 105 Copynumber: 3.0 Consensus size: 105
37306 TATTTCAGGG
* * * * *
37316 AAACTATCTCAAGCGAGATAAAATCTTATGTTTCGAAGGAATCTATTTTAAGCGAGAAAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAAGGAAACTATCTCAACCGAGAAAAAATCT
* * * * * *
37381 TTTGTTTCGAGGGAAACTATCTCAAGCTAGACATAATCTC
66 TATGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCTC
* * *
37421 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAAGGAAACTATCTCAACCGAGAAAAAATCT
*
37486 TATGTTTCAAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTC
66 TATGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAA-----T-C-TC
* * * * * *
37533 GAGGAAAACCATCTCAAGCGAGATAAAATATTATGTTTC-AAGGGAAACCATCTCAAGCGAGATA
1 -----AAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAA-GGAAACTATCTCAACCGAGAAA
* * * *
37597 AAATCTTTTGTTTC-GAGGAAAACTCTCTCAAGCGAGATAAAATCT
60 AAATCTTATGTTTCAAAGG-AAACTATCTCAAGCGAGAAAAAATCT
37642 TTTGTTTTGA
Statistics
Matches: 179, Mismatches: 28, Indels: 23
0.78 0.12 0.10
Matches are distributed among these distances:
105 86 0.48
110 2 0.01
111 2 0.01
112 3 0.02
116 4 0.02
117 82 0.46
ACGTcount: A:0.38, C:0.18, G:0.17, T:0.28
Consensus pattern (105 bp):
AAACTATCTCAAGCGAGACAAAATCTTATGTTTCGAAGGAAACTATCTCAACCGAGAAAAAATCT
TATGTTTCAAAGGAAACTATCTCAAGCGAGAAAAAATCTC
Found at i:37547 original size:144 final size:143
Alignment explanation
Indices: 37278--37551 Score: 431
Period size: 144 Copynumber: 1.9 Consensus size: 143
37268 ATTTTAAGAG
** * *
37278 AAACTATCTCAAGCGAGTTAAAATATTCTATTTCAGGGAAACTATCTCAAGCGAGATAAAATCTT
1 AAACTATCTCAAGCGAGACAAAATATTCTATTTCAGGGAAACTATCTCAACCGAGACAAAATCTT
* * * * * *
37343 ATGTTTCGAAGGAATCTATTTTAAGCGAGAAAAAATCTTTTGTTTCGAGGGAAACTATCTCAAGC
66 ATGTTTCAAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGAAAACCATCTCAAGC
37408 TAGACATAATCTC
131 TAGACATAATCTC
* *
37421 AAACTATCTCAAGCGAGACAAAATCTTCTGTTTCGAGGGAAACTATCTCAACCGAGACAAAATCT
1 AAACTATCTCAAGCGAGACAAAATATTCTATTTC-AGGGAAACTATCTCAACCGAGACAAAATCT
37486 TATGTTTCAAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGAAAACCATCTCAAG
65 TATGTTTCAAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGAAAACCATCTCAAG
37551 C
130 C
37552 GAGATAAAAT
Statistics
Matches: 118, Mismatches: 12, Indels: 1
0.90 0.09 0.01
Matches are distributed among these distances:
143 30 0.25
144 88 0.75
ACGTcount: A:0.38, C:0.18, G:0.16, T:0.28
Consensus pattern (143 bp):
AAACTATCTCAAGCGAGACAAAATATTCTATTTCAGGGAAACTATCTCAACCGAGACAAAATCTT
ATGTTTCAAAGGAAACTATTTCAAGCGAGAAAAAATCTTTTGCTTCGAGGAAAACCATCTCAAGC
TAGACATAATCTC
Found at i:38253 original size:19 final size:19
Alignment explanation
Indices: 38231--38267 Score: 56
Period size: 19 Copynumber: 1.9 Consensus size: 19
38221 CTTCTGTTTC
**
38231 GAGGGAAATTATCTCAAGT
1 GAGGGAAACCATCTCAAGT
38250 GAGGGAAACCATCTCAAG
1 GAGGGAAACCATCTCAAG
38268 CGAGATAAAA
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
19 16 1.00
ACGTcount: A:0.38, C:0.16, G:0.27, T:0.19
Consensus pattern (19 bp):
GAGGGAAACCATCTCAAGT
Found at i:38287 original size:58 final size:58
Alignment explanation
Indices: 38192--38306 Score: 169
Period size: 58 Copynumber: 2.0 Consensus size: 58
38182 CTTTTGTTTC
* * * **
38192 GAGGGAAACCATCTCATGCGAGATAAAATCTTCTGTTTCGAGGGAAATTATCTCAAGT
1 GAGGGAAACCATCTCAAGCGAGATAAAATCTTATGTTTCAAGGGAAACCATCTCAAGT
38250 GAGGGAAACCATCTCAAGCGAGATAAAA-CATTATGTTTCAAGGGAAACCATCTCAAG
1 GAGGGAAACCATCTCAAGCGAGATAAAATC-TTATGTTTCAAGGGAAACCATCTCAAG
38307 CGAGATAAAA
Statistics
Matches: 51, Mismatches: 5, Indels: 2
0.88 0.09 0.03
Matches are distributed among these distances:
57 1 0.02
58 50 0.98
ACGTcount: A:0.37, C:0.18, G:0.22, T:0.23
Consensus pattern (58 bp):
GAGGGAAACCATCTCAAGCGAGATAAAATCTTATGTTTCAAGGGAAACCATCTCAAGT
Found at i:38294 original size:39 final size:39
Alignment explanation
Indices: 38250--39940 Score: 1841
Period size: 39 Copynumber: 43.6 Consensus size: 39
38240 TATCTCAAGT
* *
38250 GAGGGAAACCATCTCAAGCGAGATAAAA-CATTATGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATC-TTCTGTTTC
* * *
38289 AAGGGAAACCATCTCAAGCGAGATAAAATCTTTTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* *
38328 GAGGGAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* *
38367 GAGGAAAACTCTCTCAAGCGAGATAAAATCTTCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
*
38406 GAGGGAAACTATCTCAAGAGAGATAAAATCTTCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
** **
38445 GAGCAAAAAGAT-TCAAGCGAGATAAAATCTTCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * * *
38483 GACGGAAACTATCCCAATCGAGACAAAATCTTTTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * *
38522 GAGGGAAACTATCTTAAGCGAGACAAAATCTTCTATTTT
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * *
38561 GACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* ** * *
38600 AAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * * *
38639 -AAGAAAACTAACTCAAGCGAGATAAAATCTTATGTTTG
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * *
38677 GAAGGAATCTATCTCAAGCGAGAAAAAATTTTCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
38716 GAGGG-AACATATCTCAAACAAGAGAAAATCTTCTGTTTC
1 GAGGGAAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * * *
38755 GAGAGAAACTATCTCAAGCCAGACAAAATATTCTGTTTT
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* *
38794 GAGGGAAACTATATCAAGCGAGACAAAATCCTT-T-TTTCC
1 GAGGGAAACTATCTCAAGCGAGATAAAAT-CTTCTGTTT-C
*
38833 GAGGGAAACTATATCAAGCGAGA-AAAATCTTCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * * *
38871 GATGGAAACTATCTAAAACGTGACAAAATCTTCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * * *
38910 AATGGAAACCATCTCATGCGAGATAAAATCTTCTATTT-
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
38948 GAGGGAAACTATCTCAAACGAGAAAAAATCTTATGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
38987 GAGGGAAACCATCTCAAGCGAGATAAAATATTATGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* *
39026 GAGGGAAACCATCTCAAGCGAGATAAACTCTTCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
39065 -ATGGGAAACTATCTAAAGCGAGATAAAATCTTATATTTC
1 GA-GGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * *
39104 GAGGGAAACTCTCCCAAGGGAGATAAAATCTCCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
39143 AAGGGAAACTATCTCAAGAGAAATAAAATCTTCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* *
39182 GAGGGATAA-GAT-TCAAGCGAGATAAAATCTTCTGTTTT
1 GAGGGA-AACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
39220 GACGGAAAATATCTCAAGCGAGATAAAATCTTTTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * * * *
39259 GAGAGAATCTATCTTAAGCGAGAAAAAATCTTCTATTTG
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * *
39298 GACGGAAACTATCTCAAGCGAAACAAAATCTTCTATTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
** * *
39337 GAAAGAAACTATCTCAAGCGAGATAAAATATTCTATTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
39376 -AAGAAAACTATCTCAAGCGAGATAAAATCTTCTGTTTT
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* *
39414 GAAGGAAACTATCTCAAGCGAGA-AAAATCTTCTATTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * *
39452 GAGGG-AACATATCTCAAACAAGAGAAAATCTTCTATTTC
1 GAGGGAAAC-TATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
39491 GAGGGAAACTATCTCAAGCGAAATAAAATATTCTGTTTT
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * * *
39530 GATGGAAACTATATCAAGCGAGACAAAATCTTTTTTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * *
39569 GAGGGAAACTATCTGAAGGGAGAAAAAACCTTCTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
39608 GAGGGAAACTA-CATAAAGCGTGAAAAAATCTTCTGTTTC
1 GAGGGAAACTATC-TCAAGCGAGATAAAATCTTCTGTTTC
* * * *
39647 GAGAGAAACTATCTCATGCGAGATAAAATTTTCAGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
39686 GAGGGAAACTATCTCAAGCGAGACAAAACCTTCTATTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * *
39725 GAGGGAAACTATCTCAAGCGAGACAAAATATTCTATTTG
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * *
39764 GAGGGAAACTATCTCAAGTGAGACAAAATCTTCTATTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * ** *
39803 TG-GAGAAACTATCTTAAGCGAGTTAAAAGATTCTATTTC
1 -GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
*
39842 -AGGGAAACTATCTCAAGCGAGATAAAATCTTCAGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
* * * * *
39880 AAAGGAAACTATCTCAAGAGAGAAAAAATCTTTTGTTTC
1 GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
39919 GAGGGAAACTATCTCAAGCGAG
1 GAGGGAAACTATCTCAAGCGAG
39941 GCTAATTCTC
Statistics
Matches: 1399, Mismatches: 228, Indels: 50
0.83 0.14 0.03
Matches are distributed among these distances:
37 8 0.01
38 247 0.18
39 1130 0.81
40 14 0.01
ACGTcount: A:0.38, C:0.17, G:0.18, T:0.28
Consensus pattern (39 bp):
GAGGGAAACTATCTCAAGCGAGATAAAATCTTCTGTTTC
Found at i:38319 original size:97 final size:97
Alignment explanation
Indices: 38153--38345 Score: 280
Period size: 97 Copynumber: 2.0 Consensus size: 97
38143 CTTCTATTTC
* * * * *
38153 GAGGGAAACTATCTAAAGCGTGAAAAAATCTTTTGTTTCGAGGGAAACCATCTCATGCGAGATAA
1 GAGGGAAACCATCTAAAGCGAGAAAAAATCTTATGTTTCAAGGGAAACCATCTCAAGCGAGATAA
*
38218 AATCTTCTGTTTCGAGGGAAATTATCTCAAGT
66 AATCTTCTGTTTCGAGGGAAACTATCTCAAGT
* *
38250 GAGGGAAACCATCTCAAGCGAGATAAAA-CATTATGTTTCAAGGGAAACCATCTCAAGCGAGATA
1 GAGGGAAACCATCTAAAGCGAGAAAAAATC-TTATGTTTCAAGGGAAACCATCTCAAGCGAGATA
* *
38314 AAATCTTTTGTTTCGAGGGAAACTCTCTCAAG
65 AAATCTTCTGTTTCGAGGGAAACTATCTCAAG
38346 CGAGATAAAA
Statistics
Matches: 85, Mismatches: 10, Indels: 2
0.88 0.10 0.02
Matches are distributed among these distances:
96 1 0.01
97 84 0.99
ACGTcount: A:0.35, C:0.17, G:0.21, T:0.26
Consensus pattern (97 bp):
GAGGGAAACCATCTAAAGCGAGAAAAAATCTTATGTTTCAAGGGAAACCATCTCAAGCGAGATAA
AATCTTCTGTTTCGAGGGAAACTATCTCAAGT
Found at i:38365 original size:175 final size:174
Alignment explanation
Indices: 38075--38423 Score: 479
Period size: 175 Copynumber: 2.0 Consensus size: 174
38065 TATTCTGTTT
* * * *
38075 TGAGGGAAACTATGTCAAGCGAGACAAAATCTTTTTTCCGAGGGAAACTATATCAAGAAAGAAAA
1 TGAGGGAAACCATCTCAAGCGAGACAAAATCTTTTTTCCAAGGGAAACCATATCAAGAAAGAAAA
* *
38140 AATCTTCTATTTCGAGGGAAACTATCTAAAGCGTGAAAAAATCTTTTGTTTCGAGGGAAAC-CAT
66 AATCTTCTATTTCGAGGGAAACTATCTAAAGCGAGAAAAAATCTTTTGTTTCGAGGAAAACTC-T
* *
38204 CTCATGCGAGATAAAATCTTCTGTTTCGAGGGAAATTATCTCAAG
130 CTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
* * **
38249 TGAGGGAAACCATCTCAAGCGAGATAAAA-CATTATGTTT-CAAGGGAAACCATCTCAAGCGAGA
1 TGAGGGAAACCATCTCAAGCGAGACAAAATC-TT-T-TTTCCAAGGGAAACCATATCAAGAAAGA
* * * * * *
38312 TAAAATCTTTTGTTTCGAGGGAAACTCTCTCAAGCGAGATAAAATCTTTTGTTTCGAGGAAAACT
63 AAAAATCTTCTATTTCGAGGGAAACTATCTAAAGCGAGAAAAAATCTTTTGTTTCGAGGAAAACT
38377 CTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
128 CTCTCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
38424 AGAGATAAAA
Statistics
Matches: 153, Mismatches: 18, Indels: 7
0.86 0.10 0.04
Matches are distributed among these distances:
173 1 0.01
174 28 0.18
175 120 0.78
176 4 0.03
ACGTcount: A:0.36, C:0.17, G:0.20, T:0.27
Consensus pattern (174 bp):
TGAGGGAAACCATCTCAAGCGAGACAAAATCTTTTTTCCAAGGGAAACCATATCAAGAAAGAAAA
AATCTTCTATTTCGAGGGAAACTATCTAAAGCGAGAAAAAATCTTTTGTTTCGAGGAAAACTCTC
TCAAGCGAGATAAAATCTTCTGTTTCGAGGGAAACTATCTCAAG
Done.