Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007664.1 Hibiscus syriacus cultivar Beakdansim tig00026155_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47157

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9817--9863
18
2.7
17
86
3
67
34
8
29
27
1.87
10188--10279
37
2.5
37
94
3
159
38
39
11
10
1.77
12133--12169
18
2.1
18
89
0
56
51
0
24
24
1.49
12154--12206
19
2.8
20
77
11
58
67
1
11
18
1.30
13043--13095
26
2.0
26
85
0
70
30
20
18
30
1.97
19673--19708
18
2.0
18
88
0
54
58
0
19
22
1.40
19693--19744
18
2.8
18
76
21
54
67
1
13
17
1.32
22325--22423
49
2.0
49
98
0
189
26
23
27
23
2.00
26649--26695
18
2.7
17
86
3
67
34
8
29
27
1.87
27029--27121
38
2.5
38
92
5
154
38
38
11
10
1.77
28973--29009
18
2.1
18
89
0
56
51
0
24
24
1.49
28994--29046
19
2.8
20
77
11
58
67
1
11
18
1.30
29884--29936
26
2.0
26
85
0
70
30
20
18
30
1.97
36518--36553
18
2.0
18
88
0
54
58
0
19
22
1.40
36538--36589
18
2.8
18
76
21
54
67
1
13
17
1.32
39148--39213
33
2.0
33
100
0
132
33
21
21
24
1.97
43437--43483
18
2.7
18
90
3
69
31
6
31
29
1.83
43818--43903
38
2.3
37
91
4
136
40
39
9
10
1.72
44673--44709
2
18.5
2
100
0
74
48
0
0
51
1.00
45782--45834
19
2.8
20
77
11
58
67
1
11
18
1.30

Tables:   1

The End!