Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007672.1 Hibiscus syriacus cultivar Beakdansim tig00027365_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33251

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2493--3057
160
3.4
164
84
8
742
18
32
30
17
1.94
2955--3141
33
5.6
33
67
19
120
17
36
28
17
1.92
11332--11908
169
3.4
168
92
1
917
18
33
32
16
1.93
11635--11719
33
2.6
33
86
1
118
20
34
30
15
1.93
11804--12022
32
6.7
32
72
18
159
17
36
29
16
1.92
11668--12038
136
2.7
135
85
8
420
17
34
31
16
1.92
11797--11985
103
1.8
102
84
6
256
15
35
31
17
1.92
11945--12019
30
2.5
31
88
4
116
21
36
26
16
1.94
11761--12038
136
2.1
134
93
4
429
15
35
30
17
1.92
12406--12437
11
2.9
11
95
0
55
9
40
37
12
1.75
20174--20258
33
2.6
33
88
1
118
21
34
28
16
1.95
20037--20610
169
3.4
170
89
3
874
18
32
31
17
1.94
20343--20427
33
2.6
33
86
1
118
22
32
28
16
1.95
20508--20729
32
6.6
33
73
14
143
17
34
30
18
1.93
20467--20748
137
2.1
136
93
2
494
15
34
31
19
1.93
20467--20820
137
2.6
137
86
5
452
15
34
32
17
1.92
28969--29051
32
2.6
32
88
1
114
20
34
27
16
1.94
28836--29398
165
3.4
166
91
5
932
17
34
31
16
1.92
29134--29214
29
2.6
31
86
9
105
19
35
29
14
1.92
29296--29509
30
6.7
31
72
21
133
16
37
28
16
1.91
29166--29527
130
2.8
132
81
11
353
16
35
31
16
1.92
29255--29527
130
2.1
131
87
7
396
15
35
31
17
1.92

Tables:   1

The End!