Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007679.1 Hibiscus syriacus cultivar Beakdansim tig00028189_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27563

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9438--9522
33
2.6
32
84
1
107
21
34
28
16
1.95
9606--9690
33
2.6
33
88
1
118
17
35
30
16
1.92
9302--9880
168
3.4
168
94
1
1000
16
33
32
16
1.92
9774--9996
32
6.6
33
76
13
195
16
36
30
16
1.91
9744--9959
65
3.2
65
72
16
231
14
37
30
17
1.90
9731--10018
138
2.1
138
98
0
558
15
34
32
17
1.91
23979--24063
33
2.6
32
84
1
107
21
34
28
16
1.95
24145--24229
33
2.6
33
88
1
118
17
35
30
16
1.92
24271--24556
136
2.1
134
94
3
412
15
33
32
17
1.92
23844--24420
166
3.4
168
91
4
934
17
33
32
16
1.92
24314--24534
33
6.6
33
70
20
106
16
35
31
16
1.92
23844--24534
166
4.1
168
87
6
828
17
34
32
16
1.92
24450--24534
33
2.6
32
90
1
125
17
36
30
15
1.91
24271--24606
137
2.5
137
87
7
461
15
33
33
17
1.91

Tables:   1

The End!