Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007685.1 Hibiscus syriacus cultivar Beakdansim tig00029187_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26427

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5923--6009
31
2.8
32
84
6
99
19
35
27
17
1.94
5792--6366
167
3.4
169
93
2
977
17
33
32
16
1.92
6093--6173
33
2.5
33
89
2
119
18
35
29
16
1.92
6260--6448
31
5.6
32
74
15
150
16
35
31
16
1.92
6252--6470
104
2.1
106
94
1
388
15
34
33
16
1.91
19428--19512
33
2.6
33
88
1
118
20
34
29
16
1.94
19292--19871
169
3.4
169
95
1
1038
17
33
33
16
1.92
19597--19680
33
2.6
33
88
3
118
20
35
28
15
1.93
19765--19955
33
5.6
33
77
11
197
17
35
31
15
1.91
19765--19955
65
2.8
66
74
13
197
17
35
31
15
1.91
19757--19977
106
2.1
106
97
0
415
16
34
33
15
1.91
20345--20376
11
2.9
11
95
0
55
9
40
37
12
1.75

Tables:   1

The End!