Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007687.1 Hibiscus syriacus cultivar Beakdansim tig00109871_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56484

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2097--2151
21
2.6
22
82
5
69
32
0
25
41
1.56
2816--2916
48
2.0
49
88
5
150
40
3
39
15
1.66
21277--21330
27
2.0
27
100
0
108
37
14
11
37
1.82
25399--25455
18
2.9
19
82
12
71
49
8
12
29
1.70
43493--43534
15
2.7
15
88
3
57
57
11
21
9
1.63
47358--47468
51
2.2
50
81
16
131
55
6
36
1
1.36
49430--49466
2
18.5
2
100
0
74
51
0
0
48
1.00
49717--49774
28
2.0
29
83
6
73
31
15
17
36
1.91
49798--49831
13
2.6
13
90
0
50
32
23
17
26
1.97
49526--49788
85
3.1
85
90
2
386
33
17
20
29
1.95
50727--50787
30
2.0
31
87
6
88
39
1
0
59
1.08
51697--51756
28
2.3
26
83
16
72
26
16
11
45
1.82
51706--51761
28
2.0
28
86
10
78
28
17
14
39
1.89
55836--55881
5
9.4
5
92
2
58
2
41
26
30
1.68
55843--55926
5
16.8
5
93
0
96
4
40
33
21
1.74

Tables:   1

The End!