Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007691.1 Hibiscus syriacus cultivar Beakdansim tig00109880_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74725

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102--373
150
1.8
147
93
0
384
37
15
15
31
1.89
6240--6283
20
2.2
20
88
4
63
43
0
6
50
1.29
20917--21044
65
2.0
65
95
0
229
14
15
26
42
1.86
21814--21843
15
2.0
15
100
0
60
40
26
6
26
1.81
27792--27862
3
23.7
3
97
0
133
35
0
0
64
0.94
29284--29328
22
2.2
20
84
8
54
37
2
4
55
1.32
40648--40710
19
3.3
19
86
10
85
80
1
17
0
0.78
40667--40714
11
4.6
11
80
15
66
81
2
16
0
0.79
40649--40714
30
2.3
29
87
10
91
81
1
16
0
0.76
41656--41953
51
5.8
51
97
2
537
24
14
24
37
1.92
41994--42149
52
3.0
52
97
1
287
22
16
25
36
1.94
41809--42233
187
2.3
188
96
2
786
24
14
24
36
1.93
42100--42393
83
3.5
83
95
1
518
25
12
22
39
1.89
42995--43553
114
4.8
114
95
4
973
36
14
20
28
1.92
42995--43553
226
2.4
231
95
4
1022
36
14
20
28
1.92
43795--43873
3
26.7
3
89
7
126
35
0
0
64
0.94
43794--43883
15
6.4
14
83
16
116
36
0
0
63
0.95
47392--47416
2
12.5
2
100
0
50
52
0
48
0
1.00
49923--49947
2
12.5
2
100
0
50
52
0
0
48
1.00
60933--61003
35
2.0
35
94
0
124
50
15
11
22
1.75
64712--64759
23
2.0
24
84
11
64
47
14
0
37
1.44
70168--70206
19
2.1
18
85
9
51
51
17
15
15
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70714--70739
2
13.0
2
100
0
52
50
0
50
0
1.00
74598--74642
2
22.5
2
95
0
81
48
0
2
48
1.13

Tables:   1

The End!