Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007696.1 Hibiscus syriacus cultivar Beakdansim tig00109904_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46218

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
373--448
3
25.3
3
88
5
91
59
0
0
40
0.98
688--743
17
3.2
17
68
26
53
17
25
8
48
1.76
794--857
20
3.2
20
64
24
53
18
23
6
51
1.69
673--2093
335
4.2
339
92
3
2294
29
18
15
36
1.92
673--2083
557
2.5
556
91
3
2315
29
18
15
36
1.92
673--2093
113
12.7
113
92
3
2220
29
18
15
36
1.92
2932--3488
83
6.7
83
96
0
1015
38
22
12
26
1.90
2843--3488
250
2.6
249
94
2
1121
37
23
12
26
1.90
2843--3488
167
3.8
167
95
2
1123
37
23
12
26
1.90
4635--4690
9
6.6
8
77
22
53
1
16
0
82
0.76
4637--4686
23
2.2
22
85
3
64
2
16
0
82
0.77
4645--4694
13
3.8
13
82
17
68
0
18
0
82
0.68
11971--11995
11
2.3
11
100
0
50
84
0
0
16
0.63
12019--12057
15
2.5
16
87
4
53
43
5
23
28
1.75
17467--17548
12
6.8
13
69
16
52
57
0
0
42
0.98
17473--17541
3
22.3
3
85
5
66
56
0
0
43
0.99
20618--20687
34
2.0
35
88
2
106
41
21
4
32
1.73
25728--25776
22
2.2
22
82
7
55
22
20
4
53
1.63
30424--30496
37
2.0
37
83
5
94
30
19
21
28
1.98
33937--33989
21
2.5
22
85
14
69
43
28
0
28
1.55
43647--43680
16
2.1
16
94
0
59
32
26
8
32
1.87
45076--45133
30
2.0
30
83
6
75
36
5
8
50
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45098--45471
189
2.0
190
85
3
513
38
5
9
47
1.58
45539--45581
22
2.0
22
86
4
61
46
2
2
48
1.27
45570--45632
27
2.3
28
81
10
69
60
6
0
33
1.22

Tables:   1

The End!