Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000077.1 Hibiscus syriacus cultivar Beakdansim tig00000141_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58784

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17120--17165
21
2.2
21
84
0
56
60
2
0
36
1.09
17213--17381
84
2.0
84
90
2
268
49
12
14
23
1.77
17783--17826
19
2.3
19
84
7
54
68
11
6
13
1.39
17837--17889
27
2.0
25
82
13
63
33
5
0
60
1.20
17960--18001
20
2.1
20
90
0
66
26
19
38
16
1.92
24129--24162
15
2.3
15
94
0
59
5
47
2
44
1.42
26013--26082
34
2.1
34
100
0
140
32
21
8
37
1.84
31168--31224
20
2.8
20
73
17
55
28
22
15
33
1.95
31210--31278
21
3.3
21
79
4
86
30
20
21
27
1.98
33225--33449
21
10.8
21
77
11
132
21
20
22
36
1.96
33250--33445
42
4.7
41
82
6
220
21
19
21
36
1.95
33250--33445
84
2.4
83
85
5
254
21
19
21
36
1.95
33472--33496
6
4.2
6
100
0
50
36
48
16
0
1.46
33987--34023
6
6.2
6
100
0
74
0
16
48
35
1.46
34175--34228
21
2.6
21
84
0
72
31
25
20
22
1.98
35173--35197
2
12.5
2
100
0
50
48
0
0
52
1.00
37265--37315
23
2.2
23
100
0
102
45
13
17
23
1.84
44049--44128
21
3.8
21
79
9
81
17
25
35
22
1.95
44070--44130
20
2.9
21
85
7
79
19
26
32
21
1.97
54151--54238
30
3.0
30
77
11
83
36
18
4
40
1.71
56627--56681
20
2.8
20
85
0
65
29
20
27
23
1.99

Tables:   1

The End!