Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000770.1 Hibiscus syriacus cultivar Beakdansim tig00001495_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64651

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1231--1256
13
2.0
13
100
0
52
38
15
0
46
1.46
9061--9155
24
4.0
24
80
2
93
49
16
12
21
1.79
9063--9132
12
5.8
12
71
6
52
51
18
12
17
1.76
12924--12974
22
2.3
22
83
12
61
37
9
0
52
1.34
25429--25469
13
3.2
13
82
0
55
21
21
19
36
1.95
29368--29424
29
2.0
29
89
6
89
47
1
7
43
1.40
32421--32472
20
2.6
20
96
0
95
34
19
13
32
1.90
33770--33819
22
2.2
23
82
13
59
56
0
4
40
1.18
33807--33858
17
3.2
16
76
13
52
55
0
0
44
0.99
34255--34312
25
2.3
25
93
0
98
22
12
29
36
1.90
35340--35457
4
29.2
4
76
11
62
44
2
9
44
1.50
35310--35457
8
18.6
8
72
6
77
41
2
11
43
1.55
35397--35451
12
4.7
12
86
4
76
36
0
14
49
1.44
35475--35519
16
2.8
16
79
0
54
68
0
0
31
0.89
36225--36401
38
4.8
38
75
12
154
45
11
4
38
1.61
36368--36505
58
2.4
59
75
10
142
43
9
6
40
1.63
36382--36536
58
2.7
58
78
6
136
42
10
7
39
1.67
40998--41100
46
2.3
44
81
6
118
50
6
3
38
1.47
44794--44845
23
2.3
22
75
12
52
30
21
17
30
1.96
47063--47097
2
18.0
2
88
5
54
48
0
0
51
1.00
48901--48953
14
3.9
13
77
15
54
54
0
1
43
1.11
48911--48961
15
3.5
14
79
12
50
54
0
1
43
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52250--52288
21
1.9
20
85
15
53
28
0
7
64
1.21
54486--54536
2
25.5
2
100
0
102
50
0
0
49
1.00
56868--56893
5
5.2
5
100
0
52
61
0
0
38
0.96
56921--56957
17
2.2
17
86
13
51
43
5
0
51
1.24
58002--58043
2
21.0
2
100
0
84
50
0
0
50
1.00
63692--63737
22
2.0
23
83
4
58
63
10
4
21
1.44

Tables:   1

The End!