Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007705.1 Hibiscus syriacus cultivar Beakdansim tig00109920_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62764

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2781--2862
29
2.8
29
94
1
137
32
14
9
42
1.79
9473--9538
30
2.2
30
86
0
87
31
24
33
10
1.89
9762--9817
24
2.3
24
100
0
112
37
16
17
28
1.91
10399--10460
23
2.7
24
87
5
83
38
9
17
33
1.83
10463--10546
30
2.7
32
80
5
93
63
10
8
17
1.51
10832--11140
43
7.2
43
78
5
286
33
18
21
26
1.96
13822--14003
41
4.5
40
69
14
133
32
20
14
32
1.92
13773--14065
82
3.6
81
80
7
292
29
19
17
34
1.94
13822--14065
82
3.0
81
85
3
314
30
19
15
34
1.93
17095--17241
73
2.0
73
90
2
233
16
27
17
38
1.91
22134--22192
29
2.0
29
90
0
91
30
18
6
44
1.76
22601--22740
46
3.1
46
85
5
187
20
22
10
46
1.81
22601--22718
20
5.0
26
69
23
107
17
22
11
48
1.79
29682--29805
45
2.8
45
95
1
223
29
22
7
40
1.81
32611--32654
16
3.0
16
78
18
51
36
2
0
61
1.09
32774--32840
9
8.1
9
75
22
51
32
1
1
64
1.12
32773--32843
16
4.6
15
76
20
67
35
1
1
61
1.13
34027--34053
13
2.1
13
100
0
54
22
25
14
37
1.93
37456--37493
19
2.0
20
94
5
69
42
5
0
52
1.24
38389--38427
19
2.1
18
90
4
60
61
0
0
38
0.96
38422--38591
42
4.3
37
73
19
96
44
2
4
48
1.34
38538--38626
40
2.3
39
80
7
101
46
0
2
51
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38535--38626
2
48.5
2
75
18
72
46
0
2
51
1.13
42524--42562
19
2.0
20
90
5
62
33
2
10
53
1.48
42482--42717
76
3.2
75
78
11
211
30
1
11
56
1.45
42518--42708
76
2.6
73
85
5
242
29
1
12
57
1.42
43298--43341
17
2.6
16
79
10
52
25
4
0
70
1.06
43388--43437
19
2.5
20
83
6
66
22
8
0
70
1.13
43379--43437
19
3.1
19
75
4
57
23
6
0
69
1.12
45067--45104
20
1.9
20
88
0
58
31
26
23
18
1.97
49471--49508
20
1.9
20
94
0
67
31
23
23
21
1.98
50556--50612
23
2.5
23
77
11
62
15
26
29
28
1.96
60006--60049
19
2.3
19
84
0
52
36
29
11
22
1.89
60624--60680
20
2.8
20
91
0
87
49
19
12
19
1.79
60678--60722
20
2.2
21
96
4
83
51
11
13
24
1.73
60722--60763
20
2.1
20
90
0
66
16
14
21
47
1.82
61226--61273
25
1.9
25
82
0
60
33
14
18
33
1.91
61364--61435
20
3.6
20
81
7
67
26
9
29
34
1.88
61404--61454
19
2.6
19
84
3
57
19
9
33
37
1.85
61563--61600
15
2.5
15
87
12
51
71
0
2
26
1.00

Tables:   1

The End!