Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007714.1 Hibiscus syriacus cultivar Beakdansim tig00109941_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79963

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--65
22
2.4
22
84
6
65
30
16
14
38
1.89
899--952
2
27.0
2
100
0
108
50
0
0
50
1.00
12008--12177
60
2.8
60
81
1
189
33
23
4
38
1.74
14140--14174
18
1.9
18
94
0
61
25
0
0
74
0.82
15145--15212
21
3.2
20
80
12
75
38
5
42
13
1.68
15479--15530
26
2.0
27
88
3
79
19
1
21
57
1.50
16404--16558
83
1.9
83
97
0
292
26
21
18
32
1.97
18930--18962
16
2.0
17
88
5
50
33
18
9
39
1.82
26867--26928
32
1.9
32
83
0
79
25
30
24
19
1.98
29495--29539
23
2.0
23
86
0
63
20
40
24
15
1.91
37244--37272
15
1.9
15
100
0
58
51
0
20
27
1.47
38295--38352
29
2.0
29
86
0
80
13
34
27
24
1.93
38395--38461
14
4.4
14
71
20
53
25
37
26
10
1.88
38389--38456
34
2.0
34
91
0
109
25
36
26
11
1.90
38444--38503
23
2.6
23
91
0
93
26
28
36
8
1.85
39354--39392
20
2.0
20
90
10
62
41
5
10
43
1.61
40124--40176
7
7.7
7
78
4
54
18
0
35
45
1.50
40121--40173
27
1.9
28
88
3
81
20
0
32
47
1.51
40299--40356
11
5.5
11
73
17
52
37
0
1
60
1.07
40331--40373
14
3.3
14
78
18
56
37
0
4
58
1.19
43948--44023
36
2.1
36
97
0
143
31
10
14
43
1.79
44446--44475
15
2.0
15
100
0
60
13
26
46
13
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48949--49024
36
2.1
36
97
0
143
31
10
14
43
1.79
53075--53124
22
2.4
20
81
15
57
12
4
22
62
1.46
53085--53126
22
2.0
22
86
13
63
11
0
23
64
1.27
53398--53725
141
2.3
143
83
8
416
23
12
13
50
1.76
64254--64311
31
1.9
31
85
3
82
50
1
5
43
1.35
64286--64372
21
4.1
21
70
11
70
45
2
2
49
1.27
64262--64372
31
3.6
30
75
7
96
45
1
3
48
1.30
64286--64403
31
3.7
32
77
8
107
45
3
2
48
1.32
70682--70764
23
3.8
22
80
13
82
21
21
32
24
1.98
79764--79963
98
2.0
103
93
6
347
25
12
25
37
1.90

Tables:   1

The End!