Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007715.1 Hibiscus syriacus cultivar Beakdansim tig00109943_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43308

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16541--16586
19
2.3
20
85
10
60
58
4
2
34
1.30
16652--16684
12
2.6
13
90
4
50
36
12
6
45
1.66
22553--22601
2
24.5
2
100
0
98
51
0
0
48
1.00
27064--27105
2
21.5
2
95
4
77
50
0
0
50
1.00
29752--29875
3
41.7
3
89
4
189
34
3
0
62
1.12
30357--30405
24
2.1
24
85
7
66
67
6
22
4
1.30
31186--31232
17
2.7
17
81
15
60
17
4
4
74
1.14
31272--31305
12
2.9
12
95
4
61
44
0
0
55
0.99
31276--31315
11
3.5
11
89
3
53
52
0
0
47
1.00
31989--32036
17
2.8
16
78
12
51
22
0
2
75
0.91
42585--42636
17
2.7
19
74
17
54
75
0
19
5
1.01

Tables:   1

The End!