Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007758.1 Hibiscus syriacus cultivar Beakdansim tig00110025_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87809

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7266--7317
21
2.6
19
84
6
68
34
13
5
46
1.67
10115--10149
9
3.8
9
85
7
52
0
5
11
82
0.82
10101--10148
23
2.2
23
85
7
64
0
6
12
81
0.87
12605--12658
22
2.5
22
81
0
63
27
24
16
31
1.96
16335--16388
22
2.5
22
81
0
63
27
24
16
31
1.96
18452--18510
24
2.4
24
78
10
66
62
15
15
6
1.51
21037--21219
91
2.0
91
88
0
267
27
21
28
22
1.99
34454--34533
35
2.2
37
91
4
128
27
3
37
31
1.74
37728--37779
15
3.4
15
75
15
52
67
0
17
15
1.24
38403--38482
35
2.2
37
91
4
128
27
3
37
31
1.74
40180--40248
33
2.1
33
83
5
86
31
1
36
30
1.67
40234--40328
13
7.8
12
72
22
58
29
3
36
30
1.73
40219--40328
36
3.1
36
92
1
168
27
3
36
32
1.74
40391--40459
33
2.1
33
83
5
86
31
1
36
30
1.67
40445--40541
13
8.0
12
74
22
71
28
2
37
31
1.69
40119--40539
211
2.0
211
99
0
833
27
6
33
32
1.83
40430--40542
36
3.2
36
89
1
165
27
2
36
33
1.71
44872--45265
208
1.9
208
97
0
752
30
17
18
33
1.94
45667--45695
15
2.0
15
93
6
51
0
20
3
75
0.94
50819--50857
16
2.4
16
86
0
51
71
2
15
10
1.23
51076--51138
21
3.0
20
77
6
63
0
12
9
77
0.98
52643--52746
33
3.1
33
82
9
95
30
36
1
30
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58289--58392
33
3.1
33
82
9
95
30
36
1
30
1.69
60874--61056
91
2.0
91
90
0
285
28
23
28
19
1.98
62841--62870
13
2.4
13
94
5
53
43
0
30
26
1.55
72081--72150
24
2.7
25
76
14
72
64
11
17
7
1.48
74891--74920
13
2.4
13
94
5
53
43
0
30
26
1.55
77688--77736
11
4.2
12
75
19
50
28
2
36
32
1.69
77687--77766
35
2.2
37
88
4
119
28
2
36
32
1.71
78105--78160
20
2.8
20
97
0
103
41
7
14
37
1.73
81253--81290
20
2.0
20
84
5
51
2
15
5
76
1.08
81318--81357
21
2.0
20
85
9
55
0
17
5
77
0.94
81732--81811
35
2.2
37
91
4
128
27
3
37
31
1.74
85152--85210
9
6.4
9
88
2
73
89
6
3
0
0.57
85152--85201
1
50.0
1
87
0
64
92
4
4
0
0.48

Tables:   1

The End!