Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007784.1 Hibiscus syriacus cultivar Beakdansim tig00110069_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72309

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2725--2756
11
2.9
11
100
0
64
46
34
9
9
1.68
9664--9718
21
2.6
21
91
0
92
32
21
14
30
1.93
12585--12622
13
2.8
14
84
8
51
15
42
15
26
1.87
19687--19716
13
2.4
13
94
5
53
26
30
0
43
1.55
22545--22593
24
2.0
24
84
7
64
20
18
26
34
1.95
24247--24315
35
1.9
35
88
2
102
31
31
2
33
1.73
30582--30648
9
7.7
9
75
12
59
82
10
7
0
0.85
30599--30666
9
7.3
10
76
15
58
76
11
11
0
1.02
30583--30646
16
3.9
15
82
15
65
81
10
7
0
0.88
30583--30659
34
2.2
35
86
4
102
79
11
9
0
0.94
30589--30666
9
8.6
9
75
13
52
75
14
10
0
1.04
40907--40941
13
2.7
13
100
0
70
31
37
22
8
1.85
41804--41834
16
1.9
16
93
0
53
77
6
9
6
1.12
41822--41887
28
2.5
26
81
11
73
63
12
13
10
1.52
46149--46508
180
2.0
180
100
0
720
34
18
12
34
1.89
59175--59357
91
2.0
91
92
0
303
28
23
27
20
1.99
61057--61099
23
1.9
21
81
13
50
34
13
18
32
1.90
63504--63547
18
2.4
18
100
0
88
18
13
36
31
1.90

Tables:   1

The End!