Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007786.1 Hibiscus syriacus cultivar Beakdansim tig00110071_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95711

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3210--3252
14
3.1
14
86
3
52
27
39
0
32
1.57
7522--7569
20
2.5
20
90
10
73
35
12
6
45
1.67
14062--14111
14
3.9
13
73
21
52
78
2
20
0
0.86
14056--14111
19
3.1
18
82
17
71
78
1
19
0
0.84
14056--14111
11
4.7
11
74
21
51
78
1
19
0
0.84
21915--21944
5
6.2
5
96
3
53
0
20
0
80
0.72
21914--21951
15
2.5
15
80
20
51
0
21
0
78
0.74
31025--31079
24
2.3
25
81
6
60
29
21
16
32
1.95
37552--37591
20
1.9
20
85
10
53
32
7
27
32
1.85
42635--42679
21
2.2
20
88
4
63
84
11
2
2
0.80
42635--42679
20
2.2
20
88
7
65
84
11
2
2
0.80
48096--48145
14
3.9
13
73
21
52
78
2
20
0
0.86
48090--48145
19
3.1
18
82
17
71
78
1
19
0
0.84
48090--48145
11
4.7
11
74
21
51
78
1
19
0
0.84
50539--50607
33
2.1
33
83
5
86
31
1
36
30
1.67
52421--52453
17
1.9
17
93
0
57
39
18
3
39
1.66
54527--54570
10
4.7
10
78
16
58
79
0
20
0
0.73
54528--54573
18
2.6
17
86
6
56
78
0
21
0
0.76
59375--59440
27
2.4
27
97
0
123
30
10
28
30
1.90
63921--64001
35
2.2
37
86
4
112
29
3
34
32
1.75
67495--67533
14
2.8
14
81
14
53
0
17
2
79
0.84
67477--67551
28
2.6
29
85
10
91
1
16
6
76
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71479--71515
19
1.9
19
89
10
58
40
5
8
45
1.56
73953--73994
15
2.7
16
88
3
59
16
28
0
54
1.42
73948--73994
15
3.0
15
84
6
58
17
29
0
53
1.44
85695--85738
18
2.4
18
84
0
52
15
6
38
38
1.75
90305--90334
14
2.1
14
93
0
51
40
0
30
30
1.57

Tables:   1

The End!