Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007787.1 Hibiscus syriacus cultivar Beakdansim tig00110073_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  146544

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10380--10409
14
2.1
14
93
0
51
40
0
30
30
1.57
18948--18999
19
2.6
21
90
6
81
46
5
13
34
1.67
23134--23185
19
2.6
21
90
6
81
46
5
13
34
1.67
30875--30931
15
3.6
16
75
15
57
68
0
17
14
1.21
31913--31955
19
2.2
19
84
12
52
51
6
9
32
1.61
37491--37519
13
2.3
13
94
5
51
44
0
31
24
1.54
50580--50609
15
2.1
15
93
6
53
0
20
3
76
0.92
51540--51581
16
2.6
16
100
0
84
33
0
45
21
1.52
56761--56812
17
3.3
15
75
15
52
1
15
3
78
0.98
61043--61096
24
2.2
24
86
0
81
57
14
14
12
1.66
62353--62407
24
2.3
25
81
6
60
32
16
21
29
1.95
68253--68303
8
6.4
8
82
13
61
0
19
1
78
0.85
68254--68303
25
2.0
26
88
11
77
0
20
2
78
0.86
68253--68304
17
3.2
17
84
15
58
0
19
1
78
0.84
68253--68306
22
2.6
21
83
16
60
0
18
1
79
0.82
76171--76219
24
2.0
24
96
0
89
32
36
14
16
1.89
79755--79801
8
5.6
8
84
5
58
78
0
19
2
0.85
79755--79810
26
2.2
26
87
12
80
78
0
19
1
0.84
79754--79799
11
3.8
12
78
16
58
80
0
17
2
0.81
79757--79817
29
2.1
29
82
11
72
75
0
22
1
0.89
79755--79816
16
3.6
16
82
8
61
77
0
20
1
0.85
98109--98150
18
2.3
18
91
0
66
50
7
7
35
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98210--98251
17
2.5
17
84
0
57
42
11
14
30
1.81
104295--104350
13
4.7
11
74
21
51
0
19
1
78
0.84
104295--104350
18
3.1
18
82
17
71
0
19
1
78
0.84
129706--129777
17
4.2
17
82
5
74
36
13
9
40
1.78
130365--130405
22
1.9
21
90
5
64
26
2
34
36
1.70
132034--132068
18
1.9
18
88
11
54
28
11
28
31
1.92
134881--134921
22
1.9
21
85
14
57
26
4
34
34
1.78
135801--135839
11
3.6
11
89
6
62
23
30
12
33
1.92
136937--137119
91
2.0
91
89
2
278
20
27
22
29
1.98
140243--140335
49
1.9
48
82
8
118
19
19
25
35
1.95
140808--140859
20
2.6
19
79
8
59
76
13
7
1
1.07

Tables:   1

The End!