Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007794.1 Hibiscus syriacus cultivar Beakdansim tig00110084_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94007

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10550--10601
17
3.0
17
82
2
68
25
1
0
73
0.94
18485--18877
196
2.0
195
98
0
759
31
16
17
34
1.92
24584--24632
20
2.4
21
75
6
55
32
20
6
40
1.77
24979--25076
32
3.1
32
94
2
164
29
27
10
32
1.90
30227--30275
10
4.8
10
80
5
62
71
2
2
24
1.07
30226--30275
21
2.4
21
90
3
75
70
2
2
26
1.09
30933--30987
26
2.1
26
86
6
76
54
0
0
45
0.99
30965--31004
19
2.1
19
86
9
55
42
2
2
52
1.28
31238--31299
10
6.0
10
74
10
54
24
3
1
70
1.10
31236--31299
21
3.0
21
70
17
60
25
3
1
70
1.11
32637--32664
7
4.0
7
100
0
56
0
28
0
71
0.86
37184--37257
21
3.6
21
70
7
80
25
21
22
29
1.99
37206--37276
19
3.6
19
68
7
61
25
23
19
30
1.98
37185--37277
40
2.3
40
98
0
177
24
23
21
30
1.99
41413--41466
17
3.1
18
76
13
58
55
24
12
7
1.63
46352--46387
18
2.0
18
88
0
54
33
25
5
36
1.79
49317--49360
12
3.7
12
90
0
61
40
20
20
18
1.91
50023--50070
24
2.0
24
91
0
78
29
25
25
20
1.99
54921--54974
21
2.6
21
82
11
67
33
20
16
29
1.95
59020--59049
2
15.0
2
100
0
60
0
0
50
50
1.00
59167--59255
44
2.0
44
100
0
178
26
32
8
31
1.87
67568--67638
32
2.2
32
92
0
115
45
23
18
12
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69767--69823
22
2.5
25
71
23
63
38
5
0
56
1.22
69780--69819
20
2.0
20
95
0
71
37
7
0
55
1.29
69780--69833
20
2.8
19
84
13
58
42
5
0
51
1.25
71512--71722
20
10.2
20
66
18
62
22
21
24
31
1.98
71512--71640
41
3.1
41
90
1
204
24
20
23
31
1.98
71571--71701
61
2.1
61
92
0
217
22
22
21
33
1.97
71529--71743
102
2.1
104
92
1
362
22
21
22
33
1.98
71632--71745
41
2.8
41
97
1
210
21
21
24
32
1.98
71571--71701
20
6.4
20
71
16
108
22
22
21
33
1.97
72961--73003
18
2.6
17
86
13
56
60
0
0
39
0.97
73284--73433
60
2.5
60
91
0
228
40
6
22
31
1.78
84402--84438
19
1.9
19
88
0
56
43
0
0
56
0.99
84195--84632
185
2.4
185
82
6
503
46
8
5
39
1.57
85744--85790
18
2.7
17
78
12
51
63
4
2
29
1.25
92928--92993
31
2.1
32
97
2
125
24
19
22
33
1.97

Tables:   1

The End!