Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000781.1 Hibiscus syriacus cultivar Beakdansim tig00001517_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44105

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7407--7468
32
2.0
32
83
3
81
50
3
6
40
1.44
8008--8050
20
2.2
20
83
8
52
46
0
4
48
1.22
19695--19759
2
32.5
2
100
0
130
49
0
0
50
1.00
25435--25675
89
2.7
89
88
3
351
22
22
25
29
1.99
26874--26936
29
2.2
28
83
8
90
42
4
0
52
1.22
26883--26937
15
3.7
15
72
16
51
45
3
0
50
1.19
27547--28547
363
2.7
361
87
4
1364
37
12
12
38
1.81
29295--29366
30
2.4
30
92
0
117
30
25
20
23
1.99
29353--29540
31
6.0
30
72
13
130
30
18
17
33
1.94
29389--29543
63
2.5
63
92
0
274
30
18
15
35
1.92
29386--29540
32
4.9
32
75
11
158
30
18
16
35
1.92

Tables:   1

The End!