Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007821.1 Hibiscus syriacus cultivar Beakdansim tig00110158_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29783

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2994--3025
15
2.1
15
94
0
55
28
18
6
46
1.73
11393--11458
29
2.3
29
94
0
114
28
13
24
33
1.93
11318--11552
123
1.9
119
93
3
398
30
16
19
34
1.94
11422--11726
94
3.3
93
94
0
520
29
14
20
35
1.92
12507--13293
108
7.0
112
83
7
886
38
14
18
29
1.90
13084--13381
123
2.5
122
86
5
385
41
16
18
23
1.90
13518--13549
11
2.8
12
90
9
57
40
0
0
59
0.97
13830--13871
19
2.2
20
95
4
77
26
50
19
4
1.67
18382--18410
2
15.0
2
92
7
51
51
0
0
48
1.00
18916--18992
2
38.5
2
97
0
145
49
1
0
49
1.09
19406--19561
65
2.4
64
84
5
190
30
21
16
32
1.95
19620--19675
21
2.7
21
88
2
87
25
28
16
30
1.96
25210--25304
44
2.2
44
85
11
124
32
23
16
27
1.96
27897--28051
65
2.4
65
91
4
244
30
21
16
30
1.96

Tables:   1

The End!