Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007828.1 Hibiscus syriacus cultivar Beakdansim tig00110167_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51322

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3224--3335
60
1.9
59
84
1
152
32
16
26
24
1.96
11350--11377
8
3.5
8
100
0
56
21
25
14
39
1.91
11446--11484
6
6.2
6
88
8
51
0
23
0
76
0.78
11446--11484
13
3.1
12
85
10
51
0
23
0
76
0.78
15294--15351
22
2.6
22
76
7
64
65
8
17
8
1.45
19068--19119
21
2.6
21
87
6
72
30
15
7
46
1.74
28441--28494
24
2.3
24
84
9
67
24
5
3
66
1.29
29755--29889
28
4.9
28
69
12
118
40
11
19
28
1.86
31313--31384
28
2.6
28
73
10
76
63
12
18
5
1.47
34014--34043
13
2.4
13
94
5
53
43
0
30
26
1.55
37432--37499
5
12.8
5
79
17
50
20
17
0
61
1.34
37435--37487
21
2.5
21
100
0
106
18
18
0
62
1.33
37433--37499
26
2.5
26
79
18
75
19
17
0
62
1.33
37452--37500
12
4.3
12
76
23
61
22
16
0
61
1.34
37751--37806
18
3.2
17
82
12
60
76
3
14
5
1.09
37752--37811
17
3.5
17
78
13
50
75
5
15
5
1.15
38479--38530
19
2.6
21
90
6
81
46
5
13
34
1.67
48246--48297
19
2.6
21
84
6
72
46
5
11
36
1.64

Tables:   1

The End!