Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007830.1 Hibiscus syriacus cultivar Beakdansim tig00110169_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39232

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
686--737
1
52.0
1
86
0
50
0
7
3
88
0.62
692--734
15
2.8
15
92
3
68
0
9
4
86
0.71
679--718
21
1.9
21
89
0
62
0
7
5
87
0.66
9797--9930
28
4.9
28
69
14
118
28
19
11
41
1.86
9797--9957
80
2.0
80
92
0
268
28
21
11
38
1.88
11660--11711
21
2.6
20
90
6
79
36
13
5
44
1.68
12251--12295
11
4.1
11
82
5
56
71
4
11
13
1.29
12251--12292
22
1.9
22
90
9
68
69
4
11
14
1.34
15858--15915
10
5.6
10
77
4
53
0
10
6
82
0.83
16235--16279
11
4.1
11
82
5
56
71
4
11
13
1.29
16235--16276
22
1.9
22
90
9
68
69
4
11
14
1.34
16763--16805
22
1.9
23
85
4
61
53
13
4
27
1.60
19443--19511
33
2.1
33
83
5
86
31
1
36
30
1.67
19496--19592
13
8.3
11
73
23
74
29
2
36
31
1.69
19482--19592
34
3.2
36
87
6
156
27
2
36
33
1.71
23940--24008
33
2.1
33
83
5
86
31
1
36
30
1.67
23979--24090
35
3.2
36
89
3
165
27
3
35
33
1.74
29172--29237
1
66.0
1
87
0
69
0
6
4
89
0.59
29161--29238
15
5.5
15
87
7
87
0
7
7
84
0.77
29154--29238
39
2.1
39
84
4
107
0
8
9
82
0.85
33843--33904
1
62.0
1
88
0
79
0
3
4
91
0.48
33833--33905
33
2.2
34
87
7
114
0
5
8
86
0.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36914--36967
1
54.0
1
88
0
81
0
0
5
94
0.31
36914--36967
23
2.3
23
90
9
92
0
0
5
94
0.31
37277--37320
11
4.0
11
82
5
54
70
4
11
13
1.31
37277--37318
22
1.9
22
90
9
68
69
4
11
14
1.34

Tables:   1

The End!