Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007831.1 Hibiscus syriacus cultivar Beakdansim tig00110171_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66779

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1565--1636
17
4.2
17
83
5
83
38
6
13
40
1.72
1565--1636
34
2.1
35
84
7
94
38
6
13
40
1.72
1568--1686
52
2.3
52
80
7
127
41
8
14
36
1.76
5279--5362
42
2.0
43
88
6
127
39
17
17
25
1.92
5787--5912
55
2.3
55
80
4
137
32
20
11
34
1.89
9406--9475
37
1.9
36
91
2
113
44
17
4
34
1.68
9405--9488
37
2.3
37
83
6
109
41
19
3
35
1.68
13980--14099
35
3.3
37
86
8
167
44
19
4
32
1.70
14031--14091
21
3.2
21
63
29
55
44
21
3
31
1.68
16623--16754
54
2.4
53
81
7
149
31
16
12
38
1.87
18319--18357
17
2.3
17
86
0
51
28
2
7
61
1.37
19892--20395
252
2.0
250
98
0
981
37
17
17
27
1.92
25712--26016
152
2.0
152
97
0
574
25
26
15
32
1.95
26778--26853
36
2.1
36
97
0
143
43
14
10
31
1.79
31329--31358
15
2.0
15
100
0
60
13
46
26
13
1.80
31779--31854
36
2.1
36
97
0
143
43
14
10
31
1.79
33763--33800
18
2.2
18
86
9
53
39
10
15
34
1.82
38536--38572
19
2.0
19
89
5
58
64
5
5
24
1.36
40615--40666
24
2.1
26
89
7
81
53
17
13
15
1.72
47418--47552
38
3.5
38
86
4
164
44
2
11
41
1.55
47513--47612
50
2.0
51
90
7
159
45
6
10
39
1.62
47513--47587
24
3.0
25
79
7
91
44
6
12
37
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47666--47738
5
14.2
5
78
16
60
17
9
0
72
1.10
47695--47755
5
12.8
5
89
6
65
19
9
0
70
1.15
47695--47764
10
7.2
10
79
12
83
20
10
0
70
1.16
47870--48004
38
3.5
38
86
4
164
44
2
11
41
1.55
47965--48064
50
2.0
51
90
7
159
45
6
10
39
1.62
47965--48039
24
3.0
25
79
7
91
44
6
12
37
1.68
48118--48190
5
14.2
5
78
16
69
17
8
0
73
1.06
48147--48207
5
12.8
5
89
6
56
19
8
0
72
1.10
48147--48216
10
7.2
10
79
12
74
20
8
0
71
1.11
47376--48281
452
2.0
452
99
0
1803
37
9
7
45
1.66
52512--52953
56
7.9
56
89
2
638
35
10
18
35
1.86
52512--52953
111
3.9
112
88
5
642
35
10
18
35
1.86
55413--55604
91
2.1
91
98
0
366
41
6
13
38
1.71
58078--58115
20
1.9
20
100
0
76
28
36
23
10
1.88
58282--58469
94
2.0
94
95
0
340
35
20
12
31
1.90
63937--63998
23
2.7
23
87
7
92
17
32
22
27
1.97
64074--64148
23
3.3
23
96
0
132
10
40
6
42
1.66

Tables:   1

The End!