Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007835.1 Hibiscus syriacus cultivar Beakdansim tig00110184_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  115627

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6598--6663
25
2.6
25
80
0
87
42
13
9
34
1.76
8281--9348
183
5.8
183
95
0
1897
34
16
14
35
1.88
10767--10820
3
18.0
3
84
0
72
25
33
3
37
1.74
10767--10824
12
4.8
12
93
0
80
25
32
5
36
1.78
10767--10835
18
3.8
18
86
0
75
23
33
5
37
1.79
10780--10832
12
4.4
12
92
0
70
22
33
7
35
1.83
12291--13662
199
6.9
199
98
0
2645
31
16
15
36
1.90
13781--13829
19
2.6
19
93
0
80
57
10
2
30
1.43
15622--15685
33
1.9
33
87
0
92
25
46
0
28
1.53
15718--15782
21
3.1
21
80
6
69
15
29
15
40
1.88
17991--18033
20
2.3
18
85
14
61
20
16
11
51
1.75
17996--18042
20
2.4
19
82
10
67
19
17
10
53
1.72
18163--18208
20
2.3
20
89
10
76
17
17
10
54
1.70
19762--19813
24
2.2
24
86
10
72
53
0
1
44
1.11
23229--24100
6
145.3
6
100
0
1744
33
0
16
50
1.46
28506--28597
46
2.0
46
95
0
166
15
15
19
50
1.79
29681--29711
14
2.2
14
94
0
53
67
9
6
16
1.39
38865--39318
51
8.6
55
88
5
239
28
25
15
29
1.96
38865--39063
55
3.6
56
81
6
219
30
23
15
30
1.95
38974--39332
51
7.0
51
94
1
565
27
27
15
29
1.96
40643--40764
26
4.6
26
73
19
101
5
19
0
73
1.08
40649--40764
17
6.6
16
76
15
63
5
19
0
74
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40649--40767
45
2.7
43
76
14
118
5
19
0
73
1.08
40649--40774
18
7.1
18
76
16
86
5
19
0
73
1.07
48477--48514
20
1.9
20
94
0
67
36
26
28
7
1.84
48478--48522
20
2.2
20
88
0
63
40
28
24
6
1.80
55511--55661
72
2.1
72
97
0
284
29
25
17
28
1.97
75271--75325
21
2.5
22
91
5
94
40
0
32
27
1.57
76047--76089
10
3.9
10
78
21
50
60
25
9
4
1.47
76046--76106
24
2.5
24
100
0
122
59
24
8
8
1.54
76046--76116
14
5.8
13
76
23
66
59
23
8
8
1.54
78212--78236
2
12.5
2
100
0
50
48
0
0
52
1.00
82733--82789
24
2.3
26
77
20
68
56
0
0
43
0.99
82751--82789
19
2.1
19
85
0
51
56
0
0
43
0.99
82787--82840
12
4.6
12
79
4
65
25
48
14
11
1.77
83408--83554
76
1.9
76
86
8
210
25
10
11
51
1.70
111053--111083
16
1.9
16
93
0
53
48
19
12
19
1.81

Tables:   1

The End!