Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007843.1 Hibiscus syriacus cultivar Beakdansim tig00110197_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60695

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1173--1535
175
2.1
177
94
2
642
25
9
18
46
1.79
15316--15492
54
3.3
54
77
10
191
30
23
24
22
1.99
16461--16519
21
2.8
20
85
10
73
1
27
1
69
1.07
16461--16519
9
6.6
9
77
13
59
1
27
1
69
1.07
16461--16519
12
4.9
12
82
12
59
1
27
1
69
1.07
18605--18678
35
2.1
35
84
0
94
45
4
2
47
1.35
18629--18793
66
2.5
71
79
14
181
40
4
4
50
1.43
18778--18928
36
4.1
36
80
4
151
41
6
5
47
1.52
19563--20429
105
8.3
105
89
4
1229
22
18
26
33
1.96
19563--20429
205
4.1
207
89
3
1242
22
18
26
33
1.96
19563--20429
310
2.8
311
90
5
1300
22
18
26
33
1.96
21034--21191
68
2.4
66
81
6
176
35
9
22
32
1.86
21035--21500
73
6.7
67
75
12
170
39
12
20
27
1.88
21166--21520
36
10.0
36
81
9
408
41
13
20
25
1.88
21304--21520
73
3.0
73
95
1
382
41
12
20
24
1.88
22447--22539
22
4.2
22
95
0
159
29
13
22
34
1.93
23029--23057
11
2.5
12
88
11
51
6
17
20
55
1.65
23190--23275
17
5.1
16
71
15
50
0
13
8
77
0.97
23178--23270
25
3.7
25
74
14
75
1
12
8
77
1.04
23196--23269
8
9.1
8
73
8
69
0
13
6
79
0.91
27493--27534
14
2.9
14
85
3
57
76
0
2
21
0.90
27577--27652
36
2.1
36
87
4
109
46
3
2
47
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27573--27750
73
2.6
72
77
15
178
41
5
4
48
1.47
27808--27899
31
2.7
33
77
19
98
43
6
6
43
1.56
27820--27900
38
2.2
36
84
4
99
44
6
6
43
1.54
29118--29151
6
5.7
6
92
0
50
38
47
0
14
1.45
31336--31465
55
2.4
55
84
1
154
29
23
25
22
1.99
33326--33366
20
2.0
20
85
0
55
0
53
34
12
1.38
33337--33375
20
2.0
20
89
0
60
2
51
30
15
1.57
38895--38934
20
2.0
20
85
0
53
42
7
0
50
1.30
40181--40223
12
3.8
12
78
12
54
44
2
0
53
1.13
40186--40243
22
2.5
22
81
13
73
39
5
0
55
1.22
54502--54543
21
2.0
20
86
4
57
64
2
0
33
1.07
55153--55226
33
2.2
33
92
0
130
44
6
13
35
1.70

Tables:   1

The End!