Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007865.1 Hibiscus syriacus cultivar Beakdansim tig00110237_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47753

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
188--351
64
2.5
64
86
1
229
28
15
26
29
1.96
302--348
19
2.5
19
83
10
62
25
17
31
25
1.97
192--397
64
3.2
62
83
8
209
27
16
24
30
1.97
8689--8897
65
3.2
63
82
8
235
27
16
24
31
1.97
8801--8847
19
2.5
19
83
10
62
25
17
31
25
1.97
10075--10134
14
4.7
12
77
20
59
70
0
3
26
1.03
10326--10378
18
2.9
17
86
8
70
64
1
5
28
1.27
10703--10807
37
2.8
37
85
0
138
30
13
14
41
1.84
12761--12822
23
2.9
21
85
7
81
20
35
25
17
1.95
12763--12848
21
4.1
20
74
14
66
22
34
26
16
1.95
17750--17834
40
2.1
40
88
0
125
29
14
23
32
1.94
19138--19254
29
3.9
29
82
8
119
47
1
9
41
1.46
19122--19254
59
2.2
62
82
9
159
51
1
8
39
1.41
25016--25122
52
2.1
52
100
0
214
27
5
24
42
1.76
27160--27204
21
2.1
21
87
0
63
31
28
24
15
1.96
27805--27851
23
2.0
24
91
4
78
44
0
21
34
1.52
28029--28184
31
5.0
31
88
1
224
21
20
21
36
1.95
28031--28184
62
2.5
62
91
4
249
21
20
21
36
1.95
31027--31071
21
2.1
21
87
0
63
31
28
24
15
1.96
31892--32047
31
5.0
31
88
1
224
21
20
21
36
1.95
31894--32047
62
2.5
62
91
4
249
21
20
21
36
1.95
38912--38958
21
2.3
20
92
7
78
14
21
29
34
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38913--38958
10
4.6
10
89
10
76
13
21
30
34
1.91
38971--39001
13
2.4
13
94
0
53
16
48
19
16
1.81
46114--46149
11
3.5
11
85
14
51
16
16
22
44
1.86
46226--46300
29
2.6
29
87
2
98
20
9
28
42
1.82

Tables:   1

The End!