Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007873.1 Hibiscus syriacus cultivar Beakdansim tig00110248_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90306

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7864--7902
16
2.4
16
87
8
53
28
2
28
41
1.69
14594--14636
21
2.0
21
81
0
50
27
27
25
18
1.98
14664--14701
20
1.9
20
88
0
58
23
34
31
10
1.89
18018--19312
105
12.4
105
92
2
2067
22
18
26
32
1.97
32648--32750
30
3.4
30
98
0
197
24
19
24
32
1.98
33715--33740
3
8.7
3
100
0
52
30
0
0
69
0.89
36324--36361
20
2.0
19
90
10
60
63
0
0
36
0.95
36350--36375
11
2.4
11
100
0
52
80
0
0
19
0.71
36426--36473
4
12.0
4
82
8
62
72
4
0
22
1.01
43826--43891
30
2.2
30
86
2
87
40
15
18
25
1.89
47528--47557
14
2.2
13
94
5
51
26
16
13
43
1.85
49344--49398
27
2.0
27
82
0
65
45
9
10
34
1.71
51103--51214
24
4.7
24
86
7
138
26
13
19
40
1.89
51428--51456
2
14.5
2
100
0
58
48
0
0
51
1.00
52033--52117
9
9.4
9
70
13
50
29
2
3
64
1.22
52070--52140
16
4.2
16
74
10
61
32
5
4
57
1.41
52075--52117
8
5.2
8
78
15
52
30
2
2
65
1.18
52101--52193
37
2.5
35
79
8
96
35
7
1
55
1.35
52109--52164
29
1.9
29
82
13
71
35
7
1
55
1.38
56137--56180
18
2.4
18
84
3
52
50
0
0
50
1.00
58230--58287
30
2.0
27
83
9
71
31
15
1
51
1.53
62866--62912
23
2.0
23
95
0
85
42
8
12
36
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70365--70447
28
2.9
30
85
8
118
25
0
44
30
1.54
70375--70453
28
2.8
28
90
3
122
25
0
43
31
1.55
70944--71693
267
2.8
265
85
4
986
29
20
20
29
1.97
71085--71688
44
13.6
44
67
5
205
29
20
20
29
1.98
71042--71700
133
5.0
133
88
1
919
29
20
20
29
1.98
72070--72431
39
9.9
36
78
11
226
37
16
20
26
1.93
72112--72204
15
5.4
15
71
26
69
37
17
25
19
1.93
72261--72600
39
8.8
39
90
0
486
35
16
19
29
1.94
72584--72618
18
1.9
18
94
0
61
28
17
11
42
1.83
72602--72844
39
6.3
39
89
2
364
35
17
16
31
1.92
72542--72657
57
2.0
57
96
0
214
31
18
17
32
1.94
72506--72683
96
1.9
96
89
0
275
34
16
17
31
1.93
72467--72735
135
2.0
135
89
1
414
34
16
17
32
1.92
72425--72773
174
2.0
173
90
1
547
34
16
18
31
1.93
72602--72844
116
2.1
117
92
2
400
35
17
16
31
1.92
75138--75218
28
2.8
28
77
15
76
49
16
17
17
1.80
75159--75218
31
2.0
31
87
9
88
50
15
18
16
1.79
78749--78807
32
1.9
32
90
10
97
38
0
32
28
1.57
80411--80465
27
2.0
27
96
0
101
58
3
9
29
1.46

Tables:   1

The End!